RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 PLCB3Q01970 1234 aa5.59□□□□□ -1.51
CNOT1-223ENST00000628857 KIAA0319Q5VV43 1072 aa5.59□□□□□ -1.51
CNOT1-223ENST00000628857 CEP135Q66GS9 1140 aa5.59□□□□□ -1.51
CNOT1-223ENST00000628857 FMR1NBQ8N0W7 255 aaPredicted RBP5.59□□□□□ -1.51
CNOT1-223ENST00000628857 TMC1Q8TDI8 760 aa5.59□□□□□ -1.51
CNOT1-223ENST00000628857 NXPE3Q969Y0 559 aa5.59□□□□□ -1.51
CNOT1-223ENST00000628857 POP1Q99575 1024 aaKnown RBP5.59□□□□□ -1.51
CNOT1-223ENST00000628857 BHLHE41Q9C0J9 482 aaPredicted RBP5.59□□□□□ -1.51
CNOT1-223ENST00000628857 RASSF4Q9H2L5 321 aa5.59□□□□□ -1.51
CNOT1-223ENST00000628857 PPME1Q9Y570 386 aa5.59□□□□□ -1.51
CNOT1-223ENST00000628857 KRBA1A5PL33 1030 aa5.58□□□□□ -1.52
CNOT1-223ENST00000628857 C9orf172C9J069 976 aa5.58□□□□□ -1.52
CNOT1-223ENST00000628857 PDE2AO00408 941 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-223ENST00000628857 EIF1AYO14602 144 aaKnown RBP5.58□□□□□ -1.52
CNOT1-223ENST00000628857 PTPRAP18433 802 aa5.58□□□□□ -1.52
CNOT1-223ENST00000628857 ERCC3P19447 782 aa5.58□□□□□ -1.52
CNOT1-223ENST00000628857 MAPK1P28482 360 aa5.58□□□□□ -1.52
CNOT1-223ENST00000628857 CDC27P30260 824 aa5.58□□□□□ -1.52
CNOT1-223ENST00000628857 PEAR1Q5VY43 1037 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-223ENST00000628857 DMRTC2Q8IXT2 367 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-223ENST00000628857 LENG1Q96BZ8 264 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-223ENST00000628857 CSRNP1Q96S65 589 aa5.58□□□□□ -1.52
CNOT1-223ENST00000628857 OSMRQ99650 979 aa5.58□□□□□ -1.52
CNOT1-223ENST00000628857 NIF3L1Q9GZT8 377 aa5.58□□□□□ -1.52
CNOT1-223ENST00000628857 KANSL3Q9P2N6 904 aa5.58□□□□□ -1.52
CNOT1-223ENST00000628857 FAM177BA6PVY3 158 aa5.57□□□□□ -1.52
CNOT1-223ENST00000628857 FGD1P98174 961 aa5.57□□□□□ -1.52
CNOT1-223ENST00000628857 ATP11AP98196 1134 aa5.57□□□□□ -1.52
CNOT1-223ENST00000628857 NRG1Q02297 640 aaPredicted RBP5.57□□□□□ -1.52
CNOT1-223ENST00000628857 IGF2-ASQ6U949 168 aa5.57□□□□□ -1.52
CNOT1-223ENST00000628857 IL22RA1Q8N6P7 574 aa5.57□□□□□ -1.52
CNOT1-223ENST00000628857 FBF1Q8TES7 1133 aa5.57□□□□□ -1.52
CNOT1-223ENST00000628857 BSNDQ8WZ55 320 aa5.57□□□□□ -1.52
CNOT1-223ENST00000628857 ZFYVE1Q9HBF4 777 aa5.57□□□□□ -1.52
CNOT1-223ENST00000628857 TRIM33Q9UPN9 1127 aa5.57□□□□□ -1.52
CNOT1-223ENST00000628857 DLL1O00548 723 aa5.56□□□□□ -1.52
CNOT1-223ENST00000628857 APBA3O96018 575 aa5.56□□□□□ -1.52
CNOT1-223ENST00000628857 PTPN12Q05209 780 aaKnown RBP5.56□□□□□ -1.52
CNOT1-223ENST00000628857 FMR1Q06787 632 aaKnown RBP eCLIP5.56□□□□□ -1.525e-9■■□□□ 11.7
CNOT1-223ENST00000628857 PLA2G4EQ3MJ16 856 aa5.56□□□□□ -1.52
CNOT1-223ENST00000628857 GDF6Q6KF10 455 aaPredicted RBP5.56□□□□□ -1.52
CNOT1-223ENST00000628857 FAM117BQ6P1L5 589 aa5.56□□□□□ -1.52
CNOT1-223ENST00000628857 CCNJLQ8IV13 435 aa5.56□□□□□ -1.52
CNOT1-223ENST00000628857 TMEM130Q8N3G9 435 aa5.56□□□□□ -1.52
CNOT1-223ENST00000628857 KLHL23Q8NBE8 558 aa5.56□□□□□ -1.52
CNOT1-223ENST00000628857 CCDC74AQ96AQ1 378 aa5.56□□□□□ -1.52
CNOT1-223ENST00000628857 ZKSCAN3Q9BRR0 538 aa5.56□□□□□ -1.52
CNOT1-223ENST00000628857 OSGEPQ9NPF4 335 aa5.56□□□□□ -1.52
CNOT1-223ENST00000628857 SOX13Q9UN79 622 aa5.56□□□□□ -1.52
CNOT1-223ENST00000628857 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.56□□□□□ -1.52
CNOT1-223ENST00000628857 A0A1W2PP55 124 aa5.55□□□□□ -1.52
CNOT1-223ENST00000628857 CABP4P57796 275 aa5.55□□□□□ -1.52
CNOT1-223ENST00000628857 PIP4K2BP78356 416 aa5.55□□□□□ -1.52
CNOT1-223ENST00000628857 ORC1Q13415 861 aa5.55□□□□□ -1.52
CNOT1-223ENST00000628857 SETDB1Q15047 1291 aa5.55□□□□□ -1.52
CNOT1-223ENST00000628857 ENOX2Q16206 610 aaKnown RBP5.55□□□□□ -1.52
CNOT1-223ENST00000628857 SOX17Q9H6I2 414 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-223ENST00000628857 TRAK1Q9UPV9 953 aa5.55□□□□□ -1.52
CNOT1-223ENST00000628857 H3BRJ5 948 aa5.54□□□□□ -1.52
CNOT1-223ENST00000628857 TM4SF5O14894 197 aa5.54□□□□□ -1.52
CNOT1-223ENST00000628857 GIPC1O14908 333 aa5.54□□□□□ -1.52
CNOT1-223ENST00000628857 DEAF1O75398 565 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-223ENST00000628857 ALG1LQ6GMV1 187 aa5.54□□□□□ -1.52
CNOT1-223ENST00000628857 PRPF40BQ6NWY9 871 aaKnown RBP5.54□□□□□ -1.52
CNOT1-223ENST00000628857 CD163Q86VB7 1156 aa5.54□□□□□ -1.52
CNOT1-223ENST00000628857 FRMD6Q96NE9 622 aa5.54□□□□□ -1.52
CNOT1-223ENST00000628857 TCF12Q99081 682 aa5.54□□□□□ -1.52
CNOT1-223ENST00000628857 SRCIN1Q9C0H9 1055 aa5.54□□□□□ -1.52
CNOT1-223ENST00000628857 PPP4R2Q9NY27 417 aa5.54□□□□□ -1.52
CNOT1-223ENST00000628857 C1QTNF9BB2RNN3 333 aa5.53□□□□□ -1.52
CNOT1-223ENST00000628857 ITGB2P05107 769 aa5.53□□□□□ -1.52
CNOT1-223ENST00000628857 XRCC5P13010 732 aaKnown RBP5.53□□□□□ -1.52
CNOT1-223ENST00000628857 SELPP16109 830 aa5.53□□□□□ -1.52
CNOT1-223ENST00000628857 ITPKAP23677 461 aa5.53□□□□□ -1.52
CNOT1-223ENST00000628857 ADGRE1Q14246 886 aa5.53□□□□□ -1.52
CNOT1-223ENST00000628857 RPS26P11Q5JNZ5 115 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-223ENST00000628857 A0A096LPE4 126 aa5.52□□□□□ -1.53
CNOT1-223ENST00000628857 A0A1W2PPZ6 126 aa5.52□□□□□ -1.53
CNOT1-223ENST00000628857 MSTNO14793 375 aa5.52□□□□□ -1.53
CNOT1-223ENST00000628857 FSCN2O14926 492 aa5.52□□□□□ -1.53
CNOT1-223ENST00000628857 ACPPP15309 386 aa5.52□□□□□ -1.53
CNOT1-223ENST00000628857 ARL4DP49703 201 aa5.52□□□□□ -1.53
CNOT1-223ENST00000628857 SUZ12Q15022 739 aaKnown RBP5.52□□□□□ -1.53
CNOT1-223ENST00000628857 GRIK4Q16099 956 aa5.52□□□□□ -1.53
CNOT1-223ENST00000628857 USPL1Q5W0Q7 1092 aa5.52□□□□□ -1.53
CNOT1-223ENST00000628857 VN1R5Q7Z5H4 357 aa5.52□□□□□ -1.53
CNOT1-223ENST00000628857 LACRTQ9GZZ8 138 aa5.52□□□□□ -1.53
CNOT1-223ENST00000628857 MRPL18Q9H0U6 180 aaKnown RBP5.52□□□□□ -1.53
CNOT1-223ENST00000628857 LIN7BQ9HAP6 207 aa5.52□□□□□ -1.53
CNOT1-223ENST00000628857 SEC31BQ9NQW1 1179 aa5.52□□□□□ -1.53
CNOT1-223ENST00000628857 NLRP2Q9NX02 1062 aa5.52□□□□□ -1.53
CNOT1-223ENST00000628857 ZBTB7CA1YPR0 619 aa5.51□□□□□ -1.53
CNOT1-223ENST00000628857 LINC01387J3KSC0 135 aa5.51□□□□□ -1.53
CNOT1-223ENST00000628857 POLR3DP05423 398 aaPredicted RBP5.51□□□□□ -1.53
CNOT1-223ENST00000628857 EPHA1P21709 976 aa5.51□□□□□ -1.53
CNOT1-223ENST00000628857 CD68P34810 354 aaPredicted RBP5.51□□□□□ -1.53
CNOT1-223ENST00000628857 CHRNA4P43681 627 aa5.51□□□□□ -1.53
CNOT1-223ENST00000628857 ADAMTSL4Q6UY14 1074 aa5.51□□□□□ -1.53
CNOT1-223ENST00000628857 DNAJC14Q6Y2X3 702 aaPredicted RBP5.51□□□□□ -1.53
CNOT1-223ENST00000628857 ANKRD24Q8TF21 1146 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms