RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 LRRFIP1Q32MZ4 808 aaKnown RBP9.14□□□□□ -0.95
PTP4A1-206ENST00000627002 CRY2Q49AN0 593 aa9.14□□□□□ -0.95
PTP4A1-206ENST00000627002 RPGRQ92834 1020 aaKnown RBP9.14□□□□□ -0.95
PTP4A1-206ENST00000627002 ANKRD2Q9GZV1 360 aa9.14□□□□□ -0.95
PTP4A1-206ENST00000627002 PARP3Q9Y6F1 533 aa9.14□□□□□ -0.95
PTP4A1-206ENST00000627002 KLRG2A4D1S0 409 aaPredicted RBP9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 MMP10P09238 476 aa9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 UQCRFS1P1P0C7P4 283 aa9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 ADORA1P30542 326 aa9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 GRAPQ13588 217 aa9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 UBE4AQ14139 1066 aa9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 CCDC24Q8N4L8 307 aa9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 GRAPLQ8TC17 118 aaPredicted RBP9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 CELF1Q92879 486 aaKnown RBP9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 RBM17Q96I25 401 aaKnown RBP9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 IPO9Q96P70 1041 aaKnown RBP9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 DNAJC2Q99543 621 aaKnown RBP9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 FSD1Q9BTV5 496 aa9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 BRIP1Q9BX63 1249 aa9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 ANO8Q9HCE9 1232 aaPredicted RBP9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 PAG1Q9NWQ8 432 aa9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 MINPP1Q9UNW1 487 aa9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 FARP1Q9Y4F1 1045 aaPredicted RBP9.13□□□□□ -0.95
PTP4A1-206ENST00000627002 RAD50Q92878 1312 aa9.12□□□□□ -0.95
PTP4A1-206ENST00000627002 SGSM2O43147 1006 aa9.12□□□□□ -0.95
PTP4A1-206ENST00000627002 MCCP23508 829 aa9.12□□□□□ -0.95
PTP4A1-206ENST00000627002 ARID4AP29374 1257 aaPredicted RBP9.12□□□□□ -0.95
PTP4A1-206ENST00000627002 PDE6BP35913 854 aa9.12□□□□□ -0.95
PTP4A1-206ENST00000627002 KIAA1211Q6ZU35 1233 aa9.12□□□□□ -0.95
PTP4A1-206ENST00000627002 TMC4Q7Z404 712 aa9.12□□□□□ -0.95
PTP4A1-206ENST00000627002 KBTBD3Q8NAB2 608 aa9.12□□□□□ -0.95
PTP4A1-206ENST00000627002 HELBQ8NG08 1087 aaPredicted RBP9.12□□□□□ -0.95
PTP4A1-206ENST00000627002 CRAMP1Q96RY5 1269 aa9.12□□□□□ -0.95
PTP4A1-206ENST00000627002 USP26Q9BXU7 913 aa9.12□□□□□ -0.95
PTP4A1-206ENST00000627002 TUBGCP6Q96RT7 1819 aa9.11□□□□□ -0.95
PTP4A1-206ENST00000627002 GOLIM4O00461 696 aa9.11□□□□□ -0.95
PTP4A1-206ENST00000627002 TAF5LO75529 589 aa9.11□□□□□ -0.95
PTP4A1-206ENST00000627002 BBOX1O75936 387 aa9.11□□□□□ -0.95
PTP4A1-206ENST00000627002 HOXA10P31260 410 aaPredicted RBP9.11□□□□□ -0.95
PTP4A1-206ENST00000627002 TTF1Q15361 905 aaPredicted RBP9.11□□□□□ -0.95
PTP4A1-206ENST00000627002 CCDC102BQ68D86 513 aa9.11□□□□□ -0.95
PTP4A1-206ENST00000627002 ZNF784Q8NCA9 323 aaPredicted RBP9.11□□□□□ -0.95
PTP4A1-206ENST00000627002 ANO2Q9NQ90 1003 aa9.11□□□□□ -0.95
PTP4A1-206ENST00000627002 ZFYP08048 801 aaPredicted RBP9.1□□□□□ -0.95
PTP4A1-206ENST00000627002 KCNJ4P48050 445 aa9.1□□□□□ -0.95
PTP4A1-206ENST00000627002 FKBP4Q02790 459 aaKnown RBP eCLIP9.1□□□□□ -0.95
PTP4A1-206ENST00000627002 CAVIN4Q5BKX8 364 aa9.1□□□□□ -0.95
PTP4A1-206ENST00000627002 MSL1Q68DK7 614 aa9.1□□□□□ -0.95
PTP4A1-206ENST00000627002 CWC27Q6UX04 472 aaKnown RBP9.1□□□□□ -0.95
PTP4A1-206ENST00000627002 SLC16A10Q8TF71 515 aa9.1□□□□□ -0.95
PTP4A1-206ENST00000627002 SNRKQ9NRH2 765 aa9.1□□□□□ -0.95
PTP4A1-206ENST00000627002 GNL3LQ9NVN8 582 aaKnown RBP9.1□□□□□ -0.95
PTP4A1-206ENST00000627002 DAXXQ9UER7 740 aaPredicted RBP9.1□□□□□ -0.95
PTP4A1-206ENST00000627002 LEMD3Q9Y2U8 911 aa9.1□□□□□ -0.95
PTP4A1-206ENST00000627002 TNRC6CQ9HCJ0 1690 aaKnown RBP9.1□□□□□ -0.95
PTP4A1-206ENST00000627002 QSER1Q2KHR3 1735 aa9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 ZBTB7AO95365 584 aa9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 NPR1P16066 1061 aa9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 ALDH1B1P30837 517 aa9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 MCAMP43121 646 aa9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 ZAP70P43403 619 aa9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 PHKA1P46020 1223 aa9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 NMIQ13287 307 aaPredicted RBP9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 BECN1Q14457 450 aa9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 ZSCAN25Q6NSZ9 544 aa9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 IL27Q8NEV9 243 aa9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 EDC3Q96F86 508 aaKnown RBP9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 HELLSQ9NRZ9 838 aa9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 SPEF2Q9C093 1822 aa9.09□□□□□ -0.95
PTP4A1-206ENST00000627002 NRXN2Q9P2S2 1712 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 ZNF804BA4D1E1 1349 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 XDHP47989 1333 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 SNAP23O00161 211 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 SEMA3EO15041 775 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 RNF113AO15541 343 aaKnown RBP9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 SRGNP10124 158 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 ANAPC15P60006 121 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 C1QTNF8P60827 252 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 SCARF1Q14162 830 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 RABEP1Q15276 862 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 MCMDC2Q4G0Z9 681 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 VPS37DQ86XT2 251 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 SPATA5Q8NB90 893 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 MASTLQ96GX5 879 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 FAM227BQ96M60 508 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 LSG1Q9H089 658 aaKnown RBP9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 ANKIB1Q9P2G1 1089 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 NDUFB9Q9Y6M9 179 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 ARAP2Q8WZ64 1704 aa9.08□□□□□ -0.96
PTP4A1-206ENST00000627002 PDS5AQ29RF7 1337 aaKnown RBP9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 COL4A1P02462 1669 aa9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 A0A0D9SFI3 127 aa9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 PPEF1O14829 653 aaPredicted RBP9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 ATP2B4P23634 1241 aa9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 MNX1P50219 401 aaPredicted RBP9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 BCAMP50895 628 aa9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 RASGRF1Q13972 1273 aa9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 ZMYM1Q5SVZ6 1142 aa9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 STYK1Q6J9G0 422 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms