RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 ERCC6L2Q5T890 1561 aa5.72□□□□□ -1.49
CDKL5-208ENST00000624953 POLA1P09884 1462 aaPredicted RBP5.72□□□□□ -1.49
CDKL5-208ENST00000624953 PATL2C9JE40 543 aaKnown RBP5.72□□□□□ -1.49
CDKL5-208ENST00000624953 LILRB5O75023 590 aa5.72□□□□□ -1.49
CDKL5-208ENST00000624953 PEAR1Q5VY43 1037 aaPredicted RBP5.72□□□□□ -1.49
CDKL5-208ENST00000624953 ZNF438Q7Z4V0 828 aa5.72□□□□□ -1.49
CDKL5-208ENST00000624953 FAM35AQ86V20 835 aa5.72□□□□□ -1.49
CDKL5-208ENST00000624953 CD163Q86VB7 1156 aa5.72□□□□□ -1.49
CDKL5-208ENST00000624953 PIK3R2O00459 728 aa5.71□□□□□ -1.5
CDKL5-208ENST00000624953 MLLT1Q03111 559 aaPredicted RBP5.71□□□□□ -1.5
CDKL5-208ENST00000624953 HYAL2Q12891 473 aa5.71□□□□□ -1.5
CDKL5-208ENST00000624953 PLD4Q96BZ4 506 aa5.71□□□□□ -1.5
CDKL5-208ENST00000624953 ADAM19Q9H013 955 aa5.71□□□□□ -1.5
CDKL5-208ENST00000624953 ZFYVE28Q9HCC9 887 aa5.71□□□□□ -1.5
CDKL5-208ENST00000624953 NOP53Q9NZM5 478 aaKnown RBP5.71□□□□□ -1.5
CDKL5-208ENST00000624953 FOXD3Q9UJU5 478 aaPredicted RBP5.71□□□□□ -1.5
CDKL5-208ENST00000624953 RAD54L2Q9Y4B4 1467 aa5.71□□□□□ -1.5
CDKL5-208ENST00000624953 J3QW42 95 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 NDUFB5O43674 189 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 CPB1P15086 417 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 PCSK2P16519 638 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 TTC39BQ5VTQ0 682 aaPredicted RBP5.7□□□□□ -1.5
CDKL5-208ENST00000624953 MSL1Q68DK7 614 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 TMC7Q7Z402 723 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 GALNT12Q8IXK2 581 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 CACTIN-AS1Q8N1I8 211 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 DTWD1Q8N5C7 304 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 PMEPA1Q969W9 287 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 NSUN5Q96P11 429 aaKnown RBP5.7□□□□□ -1.5
CDKL5-208ENST00000624953 PLVAPQ9BX97 442 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 DZANK1Q9NVP4 752 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 DCTN4Q9UJW0 460 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 BRPF3Q9ULD4 1205 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 SNAPC4Q5SXM2 1469 aa5.7□□□□□ -1.5
CDKL5-208ENST00000624953 SYNJ1O43426 1573 aa5.69□□□□□ -1.5
CDKL5-208ENST00000624953 EREGO14944 169 aa5.69□□□□□ -1.5
CDKL5-208ENST00000624953 TREHO43280 583 aa5.69□□□□□ -1.5
CDKL5-208ENST00000624953 RGS9O75916 674 aaPredicted RBP5.69□□□□□ -1.5
CDKL5-208ENST00000624953 ATP11AP98196 1134 aa5.69□□□□□ -1.5
CDKL5-208ENST00000624953 DOC2BQ14184 412 aa5.69□□□□□ -1.5
CDKL5-208ENST00000624953 HFE2Q6ZVN8 426 aa5.69□□□□□ -1.5
CDKL5-208ENST00000624953 DMRTB1Q96MA1 342 aa5.69□□□□□ -1.5
CDKL5-208ENST00000624953 PBX4Q9BYU1 374 aa5.69□□□□□ -1.5
CDKL5-208ENST00000624953 BHLHE41Q9C0J9 482 aaPredicted RBP5.69□□□□□ -1.5
CDKL5-208ENST00000624953 SMG9Q9H0W8 520 aaKnown RBP5.69□□□□□ -1.5
CDKL5-208ENST00000624953 JPH1Q9HDC5 661 aaPredicted RBP5.69□□□□□ -1.5
CDKL5-208ENST00000624953 ABCC8Q09428 1581 aa5.68□□□□□ -1.5
CDKL5-208ENST00000624953 A0A0A0MRY4 1105 aa5.68□□□□□ -1.5
CDKL5-208ENST00000624953 DEAF1O75398 565 aaPredicted RBP5.68□□□□□ -1.5
CDKL5-208ENST00000624953 SPATA31C1P0DKV0 1188 aa5.68□□□□□ -1.5
CDKL5-208ENST00000624953 ACPPP15309 386 aa5.68□□□□□ -1.5
CDKL5-208ENST00000624953 EIF2AK2P19525 551 aaKnown RBP5.68□□□□□ -1.5
CDKL5-208ENST00000624953 PDE3BQ13370 1112 aa5.68□□□□□ -1.5
CDKL5-208ENST00000624953 C8orf34Q49A92 452 aa5.68□□□□□ -1.5
CDKL5-208ENST00000624953 KIAA0319Q5VV43 1072 aa5.68□□□□□ -1.5
CDKL5-208ENST00000624953 FMR1NBQ8N0W7 255 aaPredicted RBP5.68□□□□□ -1.5
CDKL5-208ENST00000624953 TMEM102Q8N9M5 508 aaPredicted RBP5.68□□□□□ -1.5
CDKL5-208ENST00000624953 NUDT8Q8WV74 236 aa5.68□□□□□ -1.5
CDKL5-208ENST00000624953 DNAJC25Q9H1X3 360 aa5.68□□□□□ -1.5
CDKL5-208ENST00000624953 RASSF4Q9H2L5 321 aa5.68□□□□□ -1.5
CDKL5-208ENST00000624953 ABCA5Q8WWZ7 1642 aa5.67□□□□□ -1.5
CDKL5-208ENST00000624953 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
CDKL5-208ENST00000624953 PHACTR2O75167 634 aa5.67□□□□□ -1.5
CDKL5-208ENST00000624953 PDIA4P13667 645 aaKnown RBP5.67□□□□□ -1.5
CDKL5-208ENST00000624953 FMR1Q06787 632 aaKnown RBP eCLIP5.67□□□□□ -1.5
CDKL5-208ENST00000624953 TBC1D8BQ0IIM8 1120 aa5.67□□□□□ -1.5
CDKL5-208ENST00000624953 ELMSAN1Q6PJG2 1045 aa5.67□□□□□ -1.5
CDKL5-208ENST00000624953 DNAJC14Q6Y2X3 702 aaPredicted RBP5.67□□□□□ -1.5
CDKL5-208ENST00000624953 SND1Q7KZF4 910 aaKnown RBP eCLIP5.67□□□□□ -1.5
CDKL5-208ENST00000624953 FBXO11Q86XK2 927 aa5.67□□□□□ -1.5
CDKL5-208ENST00000624953 ASB16Q96NS5 453 aa5.67□□□□□ -1.5
CDKL5-208ENST00000624953 HHIPQ96QV1 700 aa5.67□□□□□ -1.5
CDKL5-208ENST00000624953 POP1Q99575 1024 aaKnown RBP5.67□□□□□ -1.5
CDKL5-208ENST00000624953 SRA1Q9HD15 236 aaKnown RBP5.67□□□□□ -1.5
CDKL5-208ENST00000624953 KANSL3Q9P2N6 904 aa5.67□□□□□ -1.5
CDKL5-208ENST00000624953 SOX13Q9UN79 622 aa5.67□□□□□ -1.5
CDKL5-208ENST00000624953 TRIM33Q9UPN9 1127 aa5.67□□□□□ -1.5
CDKL5-208ENST00000624953 AMOTL2Q9Y2J4 779 aa5.67□□□□□ -1.5
CDKL5-208ENST00000624953 SHROOM2Q13796 1616 aa5.66□□□□□ -1.5
CDKL5-208ENST00000624953 CUX1P39880 1505 aa5.66□□□□□ -1.5
CDKL5-208ENST00000624953 SPDYE3A6NKU9 549 aa5.66□□□□□ -1.5
CDKL5-208ENST00000624953 DLL1O00548 723 aa5.66□□□□□ -1.5
CDKL5-208ENST00000624953 CES1P23141 567 aa5.66□□□□□ -1.5
CDKL5-208ENST00000624953 USPL1Q5W0Q7 1092 aa5.66□□□□□ -1.5
CDKL5-208ENST00000624953 NXPE3Q969Y0 559 aa5.66□□□□□ -1.5
CDKL5-208ENST00000624953 TCF12Q99081 682 aa5.66□□□□□ -1.5
CDKL5-208ENST00000624953 ZKSCAN3Q9BRR0 538 aa5.66□□□□□ -1.5
CDKL5-208ENST00000624953 KRTAP9-2Q9BYQ4 174 aa5.66□□□□□ -1.5
CDKL5-208ENST00000624953 IGFLR1Q9H665 355 aa5.66□□□□□ -1.5
CDKL5-208ENST00000624953 FGD5Q6ZNL6 1462 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 MAGI1Q96QZ7 1491 aaPredicted RBP5.65□□□□□ -1.5
CDKL5-208ENST00000624953 CEP170Q5SW79 1584 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 A0A1W2PP55 124 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 GHRHP01286 108 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 EDN3P14138 238 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 ELNP15502 786 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 SELPP16109 830 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 ORC1Q13415 861 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 SETDB1Q15047 1291 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 ENOX2Q16206 610 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms