RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 CTAGE5O15320 804 aa11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 PCCAP05165 728 aaPredicted RBP11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 ZFYP08048 801 aaPredicted RBP11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 IL2RBP14784 551 aa11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 RGS22Q8NE09 1264 aa11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 MYRIPQ8NFW9 859 aa11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 KIAA1524Q8TCG1 905 aa11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 ZNF396Q96N95 335 aaPredicted RBP11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 ZNF830Q96NB3 372 aaPredicted RBP11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 TTC12Q9H892 705 aaPredicted RBP11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 CTNNA3Q9UI47 895 aa11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 AKAP2Q9Y2D5 859 aa11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 MYH7P12883 1935 aa11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 SOS2Q07890 1332 aaPredicted RBP11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 PTPDC1A2A3K4 754 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 CSF1RP07333 972 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 PDIA3P30101 505 aaKnown RBP11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 CDC25BP30305 580 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 FGD1P98174 961 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 APOBRQ0VD83 1088 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 ANO6Q4KMQ2 910 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 TOM1L2Q6ZVM7 507 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 BRINP3Q76B58 766 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 MTERF4Q7Z6M4 381 aaKnown RBP11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 PLA2G4DQ86XP0 818 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 BICD2Q8TD16 824 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 ZNF594Q96JF6 807 aaPredicted RBP11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 TEX13AQ9BXU3 409 aaPredicted RBP11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 PUS3Q9BZE2 481 aaKnown RBP11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 KCNF1Q9H3M0 494 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 ZBTB3Q9H5J0 574 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 PRDM11Q9NQV5 511 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 WDR19Q8NEZ3 1342 aa11.31□□□□□ -0.6
IGHV3-54-201ENST00000622166 M0R2C6 588 aa11.3□□□□□ -0.6
IGHV3-54-201ENST00000622166 NR1I2O75469 434 aa11.3□□□□□ -0.6
IGHV3-54-201ENST00000622166 GTF2F1P35269 517 aaKnown RBP eCLIP11.3□□□□□ -0.6
IGHV3-54-201ENST00000622166 ZNF75DP51815 510 aa11.3□□□□□ -0.6
IGHV3-54-201ENST00000622166 CAMK4Q16566 473 aa11.3□□□□□ -0.6
IGHV3-54-201ENST00000622166 GLIPR1L2Q4G1C9 344 aa11.3□□□□□ -0.6
IGHV3-54-201ENST00000622166 CCDC158Q5M9N0 1113 aa11.3□□□□□ -0.6
IGHV3-54-201ENST00000622166 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
IGHV3-54-201ENST00000622166 DDX11Q96FC9 970 aa11.3□□□□□ -0.6
IGHV3-54-201ENST00000622166 LRRC2Q9BYS8 371 aa11.3□□□□□ -0.6
IGHV3-54-201ENST00000622166 CDHR2Q9BYE9 1310 aa11.3□□□□□ -0.6
IGHV3-54-201ENST00000622166 ANKRD36CQ5JPF3 1778 aa11.29□□□□□ -0.6
IGHV3-54-201ENST00000622166 CCDC57Q2TAC2 916 aa11.29□□□□□ -0.6
IGHV3-54-201ENST00000622166 SLFNL1Q499Z3 407 aa11.29□□□□□ -0.6
IGHV3-54-201ENST00000622166 TTC39AQ5SRH9 613 aa11.29□□□□□ -0.6
IGHV3-54-201ENST00000622166 SARM1Q6SZW1 724 aa11.29□□□□□ -0.6
IGHV3-54-201ENST00000622166 LUZP1Q86V48 1076 aa11.29□□□□□ -0.6
IGHV3-54-201ENST00000622166 CKAP2LQ8IYA6 745 aa11.29□□□□□ -0.6
IGHV3-54-201ENST00000622166 ENGASEQ8NFI3 743 aa11.29□□□□□ -0.6
IGHV3-54-201ENST00000622166 OSBP2Q969R2 916 aa11.29□□□□□ -0.6
IGHV3-54-201ENST00000622166 A0A0G2JLW4 131 aa11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 FOXP2O15409 715 aa11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 ZNF165P49910 485 aa11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 IQCB1Q15051 598 aa11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 CCAR1Q8IX12 1150 aaKnown RBP11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 MPNDQ8N594 471 aa11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 APPBP2Q92624 585 aa11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 XAGE2Q96GT9 111 aa11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 ZNF512BQ96KM6 892 aaPredicted RBP11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 RTEL1Q9NZ71 1219 aa11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 PYCARDQ9ULZ3 195 aa11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 CCDC9Q9Y3X0 531 aaKnown RBP11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 AKAP11Q9UKA4 1901 aa11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 CARMIL3Q8ND23 1372 aa11.28□□□□□ -0.6
IGHV3-54-201ENST00000622166 RIC1Q4ADV7 1423 aa11.27□□□□□ -0.6
IGHV3-54-201ENST00000622166 C4AP0C0L4 1744 aa11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 C4BP0C0L5 1744 aa11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 A0A1W2PQ27 194 aa11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 A0A1W2PQ64 194 aa11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 A0A1W2PQD8 194 aa11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 PRKCSHP14314 528 aaPredicted RBP11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 FDPSP14324 419 aaKnown RBP11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 ADORA1P30542 326 aa11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 CCT2P78371 535 aaKnown RBP11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 STX1AQ16623 288 aa11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 IMMTQ16891 758 aaKnown RBP11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 DNTTIP2Q5QJE6 756 aaKnown RBP11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 TTLL5Q6EMB2 1281 aa11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 CCDC73Q6ZRK6 1079 aa11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 ILDR1Q86SU0 546 aaPredicted RBP11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 MB21D2Q8IYB1 491 aaPredicted RBP11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 ZBTB38Q8NAP3 1195 aaPredicted RBP11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 USP28Q96RU2 1077 aa11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 ITGB4P16144 1822 aa11.27□□□□□ -0.61
IGHV3-54-201ENST00000622166 ATRNO75882 1429 aa11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 PTGS1P23219 599 aa11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 RBM10P98175 930 aaKnown RBP11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 FAM160A1Q05DH4 1040 aa11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 SNW1Q13573 536 aaKnown RBP11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 GORABQ5T7V8 394 aa11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 KIF6Q6ZMV9 814 aa11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 C17orf53Q8N3J3 647 aaPredicted RBP11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 SPC24Q8NBT2 197 aa11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 DNAJC25Q9H1X3 360 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms