RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 CAVIN4Q5BKX8 364 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 SLC12A7Q9Y666 1083 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 EVCP57679 992 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 CCDC102BQ68D86 513 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 GSTA5Q7RTV2 222 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 DDX12PQ92771 950 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 TRIM7Q9C029 511 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 KDM5BQ9UGL1 1544 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 AFMP43652 599 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 PPP2R3AQ06190 1150 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 NEDD9Q14511 834 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 TMEM266Q2M3C6 531 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 RRAGBQ5VZM2 374 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 DZIP1Q86YF9 867 aaKnown RBP11.22□□□□□ -0.61
COL4A6-210ENST00000621266 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
COL4A6-210ENST00000621266 MYCBPQ99417 103 aaPredicted RBP11.22□□□□□ -0.61
COL4A6-210ENST00000621266 WDR7Q9Y4E6 1490 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 GOLGA8AA7E2F4 631 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 RPAINQ86UA6 219 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
COL4A6-210ENST00000621266 TBC1D32Q96NH3 1257 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 PARP3Q9Y6F1 533 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 PLCH2O75038 1416 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 UHRF1BP1Q6BDS2 1440 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 ZSCAN22P10073 491 aaPredicted RBP11.22□□□□□ -0.61
COL4A6-210ENST00000621266 GJC1P36383 396 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 CCDC170Q8IYT3 715 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.22□□□□□ -0.61
COL4A6-210ENST00000621266 ACEP12821 1306 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 TTC21BQ7Z4L5 1316 aa11.22□□□□□ -0.61
COL4A6-210ENST00000621266 F8W031 263 aaPredicted RBP11.21□□□□□ -0.61
COL4A6-210ENST00000621266 RIOK3O14730 519 aaKnown RBP11.21□□□□□ -0.61
COL4A6-210ENST00000621266 PEX19P40855 299 aa11.21□□□□□ -0.61
COL4A6-210ENST00000621266 CEP128Q6ZU80 1094 aa11.21□□□□□ -0.61
COL4A6-210ENST00000621266 FRMD3A2A2Y4 597 aa11.21□□□□□ -0.61
COL4A6-210ENST00000621266 CAVIN2O95810 425 aa11.21□□□□□ -0.61
COL4A6-210ENST00000621266 SYKP43405 635 aa11.21□□□□□ -0.61
COL4A6-210ENST00000621266 TRMT1LQ7Z2T5 733 aaKnown RBP11.21□□□□□ -0.61
COL4A6-210ENST00000621266 WHAMMQ8TF30 809 aa11.21□□□□□ -0.61
COL4A6-210ENST00000621266 IFT74Q96LB3 600 aa11.21□□□□□ -0.61
COL4A6-210ENST00000621266 BTG4Q9NY30 223 aa11.21□□□□□ -0.61
COL4A6-210ENST00000621266 GLRX3O76003 335 aaKnown RBP11.21□□□□□ -0.62
COL4A6-210ENST00000621266 FBLN1P23142 703 aa11.21□□□□□ -0.62
COL4A6-210ENST00000621266 CTCFLQ8NI51 663 aaPredicted RBP11.21□□□□□ -0.62
COL4A6-210ENST00000621266 VCX3BQ9H321 246 aa11.21□□□□□ -0.62
COL4A6-210ENST00000621266 RABGAP1Q9Y3P9 1069 aa11.21□□□□□ -0.62
COL4A6-210ENST00000621266 ARID5AQ03989 594 aa11.21□□□□□ -0.62
COL4A6-210ENST00000621266 KIF1BPQ96EK5 621 aa11.21□□□□□ -0.62
COL4A6-210ENST00000621266 NBPF6Q5VWK0 638 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 AP1ARQ63HQ0 302 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 NBPF5PQ86XG9 351 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-210ENST00000621266 NBPF4Q96M43 638 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 CETN1Q12798 172 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 PNMA8AQ86V59 439 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-210ENST00000621266 ARFGAP2Q8N6H7 521 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 SSH1Q8WYL5 1049 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 EIF4G3O43432 1585 aaKnown RBP11.2□□□□□ -0.62
COL4A6-210ENST00000621266 CCDC194A0A1B0GVG4 234 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 TXNDC9O14530 226 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 CA8P35219 290 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 RARSP54136 660 aaKnown RBP11.2□□□□□ -0.62
COL4A6-210ENST00000621266 TSNAXIP1Q2TAA8 658 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 FMNL3Q8IVF7 1028 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 CCDC50Q8IVM0 306 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 PPP1R9BQ96SB3 815 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 TACO1Q9BSH4 297 aaKnown RBP11.2□□□□□ -0.62
COL4A6-210ENST00000621266 ATP10BO94823 1461 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 FAM98CQ17RN3 349 aaKnown RBP11.2□□□□□ -0.62
COL4A6-210ENST00000621266 NECAB1Q8N987 351 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 MICAL1Q8TDZ2 1067 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 ARHGEF2Q92974 986 aaKnown RBP11.2□□□□□ -0.62
COL4A6-210ENST00000621266 CALML4Q96GE6 196 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 CTAGE1Q96RT6 745 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 HMGB1P09429 215 aaKnown RBP11.2□□□□□ -0.62
COL4A6-210ENST00000621266 LMOD1P29536 600 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-210ENST00000621266 RAB34Q9BZG1 259 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 DACT1Q9NYF0 836 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 TPX2Q9ULW0 747 aaKnown RBP11.2□□□□□ -0.62
COL4A6-210ENST00000621266 VAV2P52735 878 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 GABPB1Q06547 395 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-210ENST00000621266 ELF2Q15723 593 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 ZCRB1Q8TBF4 217 aaKnown RBP11.2□□□□□ -0.62
COL4A6-210ENST00000621266 TMX3Q96JJ7 454 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 VCXQ9H320 206 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 GJA3Q9Y6H8 435 aa11.2□□□□□ -0.62
COL4A6-210ENST00000621266 CCDC196A0A1B0GTZ2 297 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 AMPD3Q01432 767 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 TNIP1Q15025 636 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 GKAP1Q5VSY0 366 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-210ENST00000621266 KANK3Q6NY19 840 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 MORC4Q8TE76 937 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 NPHP3Q7Z494 1330 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 EXOC1Q9NV70 894 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 USP21Q9UK80 565 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 ERO1AQ96HE7 468 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 UTP14AQ9BVJ6 771 aaKnown RBP11.19□□□□□ -0.62
COL4A6-210ENST00000621266 CCDC8Q9H0W5 538 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-210ENST00000621266 MKRN1Q9UHC7 482 aaKnown RBP11.19□□□□□ -0.62
COL4A6-210ENST00000621266 PABPN1LA6NDY0 278 aaKnown RBP11.19□□□□□ -0.62
COL4A6-210ENST00000621266 RANBP6O60518 1105 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 200.7 ms