RNA–Protein interactions for RNA: ENST00000620040.4

DMD-230, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-230ENST00000620040 ATP8B1O43520 1251 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 ZSCAN22P10073 491 aaPredicted RBP4.75□□□□□ -1.65
DMD-230ENST00000620040 MTIF2P46199 727 aaKnown RBP4.75□□□□□ -1.65
DMD-230ENST00000620040 EVCP57679 992 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 CHMP4BP1P59074 171 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 SNCBQ16143 134 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 ATL3Q6DD88 541 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 GEMIN8Q9NWZ8 242 aaKnown RBP4.75□□□□□ -1.65
DMD-230ENST00000620040 AKR1B10O60218 316 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 BRD3Q15059 726 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 SPAG5Q96R06 1193 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 MPHOSPH8Q99549 860 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 TTF2Q9UNY4 1162 aaKnown RBP4.75□□□□□ -1.65
DMD-230ENST00000620040 A0A087WZG4 1122 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 MATR3P43243 847 aaKnown RBP eCLIP4.75□□□□□ -1.65
DMD-230ENST00000620040 PSMC4P43686 418 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 CFAP157Q5JU67 520 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 PRPF4BQ13523 1007 aaKnown RBP4.75□□□□□ -1.65
DMD-230ENST00000620040 SLC4A8Q2Y0W8 1093 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 USP37Q86T82 979 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 EIF4G3O43432 1585 aaKnown RBP4.75□□□□□ -1.65
DMD-230ENST00000620040 ACTN4O43707 911 aaKnown RBP4.75□□□□□ -1.65
DMD-230ENST00000620040 PRR16Q569H4 304 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 GOLGA6BA6NDN3 693 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 HDAC1Q13547 482 aaPredicted RBP4.75□□□□□ -1.65
DMD-230ENST00000620040 TNIP1Q15025 636 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 CCDC26Q8TAB7 109 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 NT5C2P49902 561 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 IFT20Q8IY31 132 aa4.75□□□□□ -1.65
DMD-230ENST00000620040 NUCKS1Q9H1E3 243 aaKnown RBP4.75□□□□□ -1.65
DMD-230ENST00000620040 RAPGEF6Q8TEU7 1601 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 EVI5O60447 810 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 PPP2R1AP30153 589 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 WHAMMQ8TF30 809 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 NOP2P46087 812 aaKnown RBP4.74□□□□□ -1.65
DMD-230ENST00000620040 RUFY3Q7L099 469 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 ARMC9Q7Z3E5 817 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 KDM5BQ9UGL1 1544 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 GKAP1Q5VSY0 366 aaPredicted RBP4.74□□□□□ -1.65
DMD-230ENST00000620040 CNPY4Q8N129 248 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 FAF1Q9UNN5 650 aaPredicted RBP4.74□□□□□ -1.65
DMD-230ENST00000620040 N4BP3O15049 544 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 COG7P83436 770 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 SMARCC2Q8TAQ2 1214 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 DTNBP1Q96EV8 351 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 CAPZA3Q96KX2 299 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 SEC63Q9UGP8 760 aaKnown RBP4.74□□□□□ -1.65
DMD-230ENST00000620040 MYH13Q9UKX3 1938 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 KDM4AO75164 1064 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 SMIM24O75264 130 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 PDE1CQ14123 709 aaPredicted RBP4.74□□□□□ -1.65
DMD-230ENST00000620040 DUSP27Q5VZP5 1158 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 TSKSQ9UJT2 592 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 SSX2IPQ9Y2D8 614 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 GJB2P29033 226 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 EXOSC9Q06265 439 aaKnown RBP4.74□□□□□ -1.65
DMD-230ENST00000620040 CALCOCO2Q13137 446 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 CWC27Q6UX04 472 aaKnown RBP4.74□□□□□ -1.65
DMD-230ENST00000620040 AFAP1L2Q8N4X5 818 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 SMC1BQ8NDV3 1235 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 CCDC68Q9H2F9 335 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 ZSWIM4Q9H7M6 989 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 OAS2P29728 719 aaKnown RBP4.74□□□□□ -1.65
DMD-230ENST00000620040 PPP4R3AQ6IN85 833 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 SSBP05455 408 aaKnown RBP eCLIP4.74□□□□□ -1.65
DMD-230ENST00000620040 SPTY2D1Q68D10 685 aaPredicted RBP4.74□□□□□ -1.65
DMD-230ENST00000620040 GOLGA8KD6RF30 607 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 DYNC1I2Q13409 638 aaKnown RBP4.74□□□□□ -1.65
DMD-230ENST00000620040 RBM26Q5T8P6 1007 aaKnown RBP4.74□□□□□ -1.65
DMD-230ENST00000620040 CALML4Q96GE6 196 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 ANKRD36BQ8N2N9 1353 aa4.74□□□□□ -1.65
DMD-230ENST00000620040 PSMD7P51665 324 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 NAPGQ99747 312 aaPredicted RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 KIAA1210Q9ULL0 1709 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 MRPS27Q92552 414 aaKnown RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 ADCY10Q96PN6 1610 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 APBA1Q02410 837 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 AMOTQ4VCS5 1084 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 CSRNP2Q9H175 543 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 CREB3O43889 395 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 ZSCAN20P17040 1043 aaPredicted RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 PAK2Q13177 524 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 APBB1IPQ7Z5R6 666 aaPredicted RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 FAM71BQ8TC56 605 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 KIF1BPQ96EK5 621 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 SH3GL3Q99963 347 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 SERPINA10Q9UK55 444 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 PDCD2Q16342 344 aaPredicted RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 FERMT3Q86UX7 667 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 CPLX3Q8WVH0 158 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 IQCDQ96DY2 449 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 TCP11L1Q9NUJ3 509 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 RTL1A6NKG5 1358 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 NPHP3Q7Z494 1330 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 BCAR3O75815 825 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 KRT13P13646 458 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 DNA2P51530 1060 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 AACSQ86V21 672 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 GFM2Q969S9 779 aaKnown RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 BICDL2A1A5D9 508 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms