RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 ATP8B2P98198 1209 aa12.45□□□□□ -0.42
CPEB1-215ENST00000617958 BICD2Q8TD16 824 aa12.45□□□□□ -0.42
CPEB1-215ENST00000617958 CARD10Q9BWT7 1032 aa12.45□□□□□ -0.42
CPEB1-215ENST00000617958 GOLGA6L9A6NEM1 432 aa12.45□□□□□ -0.42
CPEB1-215ENST00000617958 MYCNP04198 464 aaPredicted RBP12.45□□□□□ -0.42
CPEB1-215ENST00000617958 HOXC9P31274 260 aa12.45□□□□□ -0.42
CPEB1-215ENST00000617958 ADCY9O60503 1353 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 ME3Q16798 604 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 TSHZ3Q63HK5 1081 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 ARMCX5Q6P1M9 558 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 HOMER1Q86YM7 354 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 UTP14AQ9BVJ6 771 aaKnown RBP12.44□□□□□ -0.42
CPEB1-215ENST00000617958 CHMP3Q9Y3E7 222 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 USP31Q70CQ4 1352 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 POTEB2H3BUK9 544 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 EIF3JO75822 258 aaKnown RBP12.44□□□□□ -0.42
CPEB1-215ENST00000617958 MAP3K9P80192 1104 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 TRDNQ13061 729 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 ANKRD1Q15327 319 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 EYA1Q99502 592 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 CARD6Q9BX69 1037 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 CFAP45Q9UL16 551 aa12.44□□□□□ -0.42
CPEB1-215ENST00000617958 A0A087WUV0 522 aaPredicted RBP12.43□□□□□ -0.42
CPEB1-215ENST00000617958 CHL1O00533 1208 aa12.43□□□□□ -0.42
CPEB1-215ENST00000617958 SRGAP3O43295 1099 aa12.43□□□□□ -0.42
CPEB1-215ENST00000617958 RAB11FIP3O75154 756 aa12.43□□□□□ -0.42
CPEB1-215ENST00000617958 ATP6V1AP38606 617 aa12.43□□□□□ -0.42
CPEB1-215ENST00000617958 APOBRQ0VD83 1088 aa12.43□□□□□ -0.42
CPEB1-215ENST00000617958 CNTROBQ8N137 903 aa12.43□□□□□ -0.42
CPEB1-215ENST00000617958 SOS1Q07889 1333 aaPredicted RBP12.43□□□□□ -0.42
CPEB1-215ENST00000617958 LTBP4Q8N2S1 1624 aa12.43□□□□□ -0.42
CPEB1-215ENST00000617958 H3BQF6 201 aa12.43□□□□□ -0.42
CPEB1-215ENST00000617958 USP5P45974 858 aa12.43□□□□□ -0.42
CPEB1-215ENST00000617958 EIF5P55010 431 aaKnown RBP12.43□□□□□ -0.42
CPEB1-215ENST00000617958 SATB1Q01826 763 aa12.43□□□□□ -0.42
CPEB1-215ENST00000617958 LONRF2Q1L5Z9 754 aa12.43□□□□□ -0.42
CPEB1-215ENST00000617958 RUFY2Q8WXA3 655 aa12.43□□□□□ -0.42
CPEB1-215ENST00000617958 ZSCAN12O43309 604 aa12.42□□□□□ -0.42
CPEB1-215ENST00000617958 USP8P40818 1118 aa12.42□□□□□ -0.42
CPEB1-215ENST00000617958 TOMM22Q9NS69 142 aa12.42□□□□□ -0.42
CPEB1-215ENST00000617958 USP42Q9H9J4 1324 aaKnown RBP12.42□□□□□ -0.42
CPEB1-215ENST00000617958 URI1O94763 535 aaPredicted RBP12.42□□□□□ -0.42
CPEB1-215ENST00000617958 TXLNAP40222 546 aa12.42□□□□□ -0.42
CPEB1-215ENST00000617958 ATL3Q6DD88 541 aa12.42□□□□□ -0.42
CPEB1-215ENST00000617958 TADA2BQ86TJ2 420 aa12.42□□□□□ -0.42
CPEB1-215ENST00000617958 PI4K2BQ8TCG2 481 aa12.42□□□□□ -0.42
CPEB1-215ENST00000617958 GOLGA1Q92805 767 aa12.42□□□□□ -0.42
CPEB1-215ENST00000617958 CCDC34Q96HJ3 373 aa12.42□□□□□ -0.42
CPEB1-215ENST00000617958 PARD6BQ9BYG5 372 aa12.42□□□□□ -0.42
CPEB1-215ENST00000617958 MRFAP1Q9Y605 127 aa12.42□□□□□ -0.42
CPEB1-215ENST00000617958 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
CPEB1-215ENST00000617958 HDXQ7Z353 690 aa12.41□□□□□ -0.42
CPEB1-215ENST00000617958 GPATCH11Q8N954 259 aa12.41□□□□□ -0.42
CPEB1-215ENST00000617958 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
CPEB1-215ENST00000617958 SPATA31A3Q5VYP0 1347 aa12.41□□□□□ -0.42
CPEB1-215ENST00000617958 PPFIA4O75335 1185 aa12.41□□□□□ -0.42
CPEB1-215ENST00000617958 ANKRD20A12PQ8NF67 263 aa12.41□□□□□ -0.42
CPEB1-215ENST00000617958 JAKMIP1Q96N16 626 aaKnown RBP12.41□□□□□ -0.42
CPEB1-215ENST00000617958 MED1Q15648 1581 aaPredicted RBP12.41□□□□□ -0.42
CPEB1-215ENST00000617958 PXDNLA1KZ92 1463 aa12.41□□□□□ -0.42
CPEB1-215ENST00000617958 TUBBP07437 444 aa12.41□□□□□ -0.42
CPEB1-215ENST00000617958 PSMA5P28066 241 aa12.41□□□□□ -0.42
CPEB1-215ENST00000617958 MAP2K2P36507 400 aa12.41□□□□□ -0.42
CPEB1-215ENST00000617958 RAB21Q9UL25 225 aa12.41□□□□□ -0.42
CPEB1-215ENST00000617958 MYH15Q9Y2K3 1946 aa12.4□□□□□ -0.42
CPEB1-215ENST00000617958 PXDNQ92626 1479 aa12.4□□□□□ -0.42
CPEB1-215ENST00000617958 UBAP1LF5GYI3 381 aa12.4□□□□□ -0.42
CPEB1-215ENST00000617958 PPP2R3AQ06190 1150 aa12.4□□□□□ -0.42
CPEB1-215ENST00000617958 RESTQ13127 1097 aa12.4□□□□□ -0.42
CPEB1-215ENST00000617958 GORABQ5T7V8 394 aa12.4□□□□□ -0.42
CPEB1-215ENST00000617958 FERMT3Q86UX7 667 aa12.4□□□□□ -0.42
CPEB1-215ENST00000617958 FAM71BQ8TC56 605 aa12.4□□□□□ -0.42
CPEB1-215ENST00000617958 A1CFQ9NQ94 594 aaKnown RBP12.4□□□□□ -0.42
CPEB1-215ENST00000617958 MAP3K5Q99683 1374 aa12.4□□□□□ -0.42
CPEB1-215ENST00000617958 ARHGEF25Q86VW2 580 aa12.4□□□□□ -0.43
CPEB1-215ENST00000617958 ERC1Q8IUD2 1116 aa12.4□□□□□ -0.43
CPEB1-215ENST00000617958 AOPEPQ8N6M6 819 aa12.4□□□□□ -0.43
CPEB1-215ENST00000617958 RCOR1Q9UKL0 485 aa12.4□□□□□ -0.43
CPEB1-215ENST00000617958 TPCN1Q9ULQ1 816 aa12.4□□□□□ -0.43
CPEB1-215ENST00000617958 TRPM3Q9HCF6 1732 aaPredicted RBP12.4□□□□□ -0.43
CPEB1-215ENST00000617958 DCCP43146 1447 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 ZKSCAN1P17029 563 aaPredicted RBP12.39□□□□□ -0.43
CPEB1-215ENST00000617958 TMC6Q7Z403 805 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 VPS18Q9P253 973 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 TFIP11Q9UBB9 837 aaKnown RBP12.39□□□□□ -0.43
CPEB1-215ENST00000617958 FANCGO15287 622 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 ERLIN1O75477 346 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 FAM160A1Q05DH4 1040 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 TUBB2AQ13885 445 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 SART3Q15020 963 aaKnown RBP12.39□□□□□ -0.43
CPEB1-215ENST00000617958 NECTIN1Q15223 517 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 DNAJC21Q5F1R6 531 aaKnown RBP12.39□□□□□ -0.43
CPEB1-215ENST00000617958 BEND6Q5SZJ8 279 aaPredicted RBP12.39□□□□□ -0.43
CPEB1-215ENST00000617958 FAM173BQ6P4H8 233 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 CCDC73Q6ZRK6 1079 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 ENGASEQ8NFI3 743 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 STAG1Q8WVM7 1258 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 LARP6Q9BRS8 491 aaKnown RBP12.39□□□□□ -0.43
CPEB1-215ENST00000617958 TUBB2BQ9BVA1 445 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms