RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 LEO1Q8WVC0 666 aaPredicted RBP17.04■□□□□ 0.32
PRKD1-209ENST00000616995 MYL10Q9BUA6 226 aa17.04■□□□□ 0.32
PRKD1-209ENST00000616995 ZBTB1Q9Y2K1 713 aa17.04■□□□□ 0.32
PRKD1-209ENST00000616995 SYNE3Q6ZMZ3 975 aa17.04■□□□□ 0.32
PRKD1-209ENST00000616995 PIBF1Q8WXW3 757 aa17.04■□□□□ 0.32
PRKD1-209ENST00000616995 AKAP2Q9Y2D5 859 aa17.04■□□□□ 0.32
PRKD1-209ENST00000616995 NFAT5O94916 1531 aa17.04■□□□□ 0.32
PRKD1-209ENST00000616995 TYRO3Q06418 890 aa17.04■□□□□ 0.32
PRKD1-209ENST00000616995 LRRFIP1Q32MZ4 808 aaKnown RBP17.04■□□□□ 0.32
PRKD1-209ENST00000616995 FILIP1Q7Z7B0 1213 aa17.04■□□□□ 0.32
PRKD1-209ENST00000616995 GTF3C6Q969F1 213 aa17.04■□□□□ 0.32
PRKD1-209ENST00000616995 NCAPD2Q15021 1401 aa17.03■□□□□ 0.32
PRKD1-209ENST00000616995 SMIM5Q71RC9 77 aa17.03■□□□□ 0.32
PRKD1-209ENST00000616995 DZIP3Q86Y13 1208 aaKnown RBP17.03■□□□□ 0.32
PRKD1-209ENST00000616995 CCAR1Q8IX12 1150 aaKnown RBP17.03■□□□□ 0.32
PRKD1-209ENST00000616995 INCENPQ9NQS7 918 aa17.03■□□□□ 0.32
PRKD1-209ENST00000616995 USP42Q9H9J4 1324 aaKnown RBP17.03■□□□□ 0.32
PRKD1-209ENST00000616995 NALCNQ8IZF0 1738 aa17.03■□□□□ 0.32
PRKD1-209ENST00000616995 PRC1O43663 620 aa17.03■□□□□ 0.32
PRKD1-209ENST00000616995 MAST3O60307 1309 aa17.03■□□□□ 0.32
PRKD1-209ENST00000616995 AIDAQ96BJ3 306 aa17.03■□□□□ 0.32
PRKD1-209ENST00000616995 NOL7Q9UMY1 257 aaKnown RBP17.03■□□□□ 0.32
PRKD1-209ENST00000616995 ZKSCAN3Q9BRR0 538 aa17.02■□□□□ 0.32
PRKD1-209ENST00000616995 ORC3Q9UBD5 711 aaPredicted RBP17.02■□□□□ 0.32
PRKD1-209ENST00000616995 TCHHQ07283 1943 aa17.02■□□□□ 0.32
PRKD1-209ENST00000616995 ZNF165P49910 485 aa17.02■□□□□ 0.32
PRKD1-209ENST00000616995 NUP133Q8WUM0 1156 aa17.02■□□□□ 0.32
PRKD1-209ENST00000616995 C8orf76Q96K31 380 aa17.02■□□□□ 0.32
PRKD1-209ENST00000616995 PUS7LQ9H0K6 701 aaKnown RBP17.02■□□□□ 0.32
PRKD1-209ENST00000616995 ZNF609O15014 1411 aa17.02■□□□□ 0.31
PRKD1-209ENST00000616995 ERVV-2B6SEH9 535 aa17.02■□□□□ 0.31
PRKD1-209ENST00000616995 VPS37DQ86XT2 251 aa17.02■□□□□ 0.31
PRKD1-209ENST00000616995 FSIP1Q8NA03 581 aa17.02■□□□□ 0.31
PRKD1-209ENST00000616995 MIGA1Q8NAN2 632 aa17.02■□□□□ 0.31
PRKD1-209ENST00000616995 CFAP45Q9UL16 551 aa17.02■□□□□ 0.31
PRKD1-209ENST00000616995 MARCKSP29966 332 aaPredicted RBP17.01■□□□□ 0.31
PRKD1-209ENST00000616995 JAG2Q9Y219 1238 aa17.01■□□□□ 0.31
PRKD1-209ENST00000616995 GPAA1O43292 621 aa17.01■□□□□ 0.31
PRKD1-209ENST00000616995 FGAP02671 866 aa17.01■□□□□ 0.31
PRKD1-209ENST00000616995 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.01■□□□□ 0.31
PRKD1-209ENST00000616995 MINDY4BA8MYZ0 360 aa17.01■□□□□ 0.31
PRKD1-209ENST00000616995 GOLGA6L6A8MZA4 724 aa17.01■□□□□ 0.31
PRKD1-209ENST00000616995 EPB41L2O43491 1005 aaKnown RBP17■□□□□ 0.31
PRKD1-209ENST00000616995 UTYO14607 1347 aa17■□□□□ 0.31
PRKD1-209ENST00000616995 A0A1B0GVL5 298 aa17■□□□□ 0.31
PRKD1-209ENST00000616995 LRP2BPQ9P2M1 347 aa17■□□□□ 0.31
PRKD1-209ENST00000616995 CTNNA3Q9UI47 895 aa17■□□□□ 0.31
PRKD1-209ENST00000616995 DENND2AQ9ULE3 1009 aa17■□□□□ 0.31
PRKD1-209ENST00000616995 B4E1Z4 1266 aa16.99■□□□□ 0.31
PRKD1-209ENST00000616995 ATP6V1AP38606 617 aa16.99■□□□□ 0.31
PRKD1-209ENST00000616995 RABL6Q3YEC7 729 aaPredicted RBP16.99■□□□□ 0.31
PRKD1-209ENST00000616995 USP28Q96RU2 1077 aa16.99■□□□□ 0.31
PRKD1-209ENST00000616995 XRN1Q8IZH2 1706 aaKnown RBP16.99■□□□□ 0.31
PRKD1-209ENST00000616995 PTGS1P23219 599 aa16.99■□□□□ 0.31
PRKD1-209ENST00000616995 TDO2P48775 406 aa16.99■□□□□ 0.31
PRKD1-209ENST00000616995 PHKBQ93100 1093 aa16.99■□□□□ 0.31
PRKD1-209ENST00000616995 HMGB1P09429 215 aaKnown RBP16.98■□□□□ 0.31
PRKD1-209ENST00000616995 PHKA1P46020 1223 aa16.98■□□□□ 0.31
PRKD1-209ENST00000616995 GLIPR1L2Q4G1C9 344 aa16.98■□□□□ 0.31
PRKD1-209ENST00000616995 HSP90AA4PQ58FG1 418 aa16.98■□□□□ 0.31
PRKD1-209ENST00000616995 CARD10Q9BWT7 1032 aa16.98■□□□□ 0.31
PRKD1-209ENST00000616995 TNS3Q68CZ2 1445 aa16.98■□□□□ 0.31
PRKD1-209ENST00000616995 CHAF1AQ13111 956 aaPredicted RBP16.98■□□□□ 0.31
PRKD1-209ENST00000616995 CCDC186Q7Z3E2 898 aa16.98■□□□□ 0.31
PRKD1-209ENST00000616995 PKNOX2Q96KN3 472 aa16.98■□□□□ 0.31
PRKD1-209ENST00000616995 HELLSQ9NRZ9 838 aa16.98■□□□□ 0.31
PRKD1-209ENST00000616995 COL15A1P39059 1388 aa16.98■□□□□ 0.31
PRKD1-209ENST00000616995 OFD1O75665 1012 aa16.98■□□□□ 0.31
PRKD1-209ENST00000616995 ZMYM1Q5SVZ6 1142 aa16.98■□□□□ 0.31
PRKD1-209ENST00000616995 CREBRFQ8IUR6 639 aa16.98■□□□□ 0.31
PRKD1-209ENST00000616995 CMTR1Q8N1G2 835 aaKnown RBP16.98■□□□□ 0.31
PRKD1-209ENST00000616995 SEC31BQ9NQW1 1179 aa16.98■□□□□ 0.31
PRKD1-209ENST00000616995 FAM208AQ9UK61 1670 aaKnown RBP16.98■□□□□ 0.31
PRKD1-209ENST00000616995 ZNF396Q96N95 335 aaPredicted RBP16.97■□□□□ 0.31
PRKD1-209ENST00000616995 AIFM3Q96NN9 605 aa16.97■□□□□ 0.31
PRKD1-209ENST00000616995 MCM5P33992 734 aa16.97■□□□□ 0.31
PRKD1-209ENST00000616995 MAGEB6Q8N7X4 407 aa16.97■□□□□ 0.31
PRKD1-209ENST00000616995 NAPBQ9H115 298 aa16.97■□□□□ 0.31
PRKD1-209ENST00000616995 ATG3Q9NT62 314 aa16.97■□□□□ 0.31
PRKD1-209ENST00000616995 ADD1P35611 737 aaKnown RBP16.97■□□□□ 0.31
PRKD1-209ENST00000616995 NCOA7Q8NI08 942 aa16.97■□□□□ 0.31
PRKD1-209ENST00000616995 RAI14Q9P0K7 980 aa16.97■□□□□ 0.31
PRKD1-209ENST00000616995 MST1RQ04912 1400 aa16.96■□□□□ 0.31
PRKD1-209ENST00000616995 TRIM29Q14134 588 aa16.96■□□□□ 0.31
PRKD1-209ENST00000616995 CPLX2Q6PUV4 134 aaKnown RBP16.96■□□□□ 0.31
PRKD1-209ENST00000616995 LRP10Q7Z4F1 713 aa16.96■□□□□ 0.31
PRKD1-209ENST00000616995 FAM200AQ8TCP9 573 aa16.96■□□□□ 0.31
PRKD1-209ENST00000616995 PGBD1Q96JS3 809 aa16.96■□□□□ 0.31
PRKD1-209ENST00000616995 PDIA3P30101 505 aaKnown RBP16.96■□□□□ 0.31
PRKD1-209ENST00000616995 CTDSPL2Q05D32 466 aa16.96■□□□□ 0.31
PRKD1-209ENST00000616995 NSUN7Q8NE18 718 aaKnown RBP16.96■□□□□ 0.31
PRKD1-209ENST00000616995 CBX8Q9HC52 389 aa16.96■□□□□ 0.31
PRKD1-209ENST00000616995 NIP7Q9Y221 180 aaKnown RBP eCLIP16.96■□□□□ 0.31
PRKD1-209ENST00000616995 HMGN5P82970 282 aaKnown RBP16.95■□□□□ 0.3
PRKD1-209ENST00000616995 NOLC1Q14978 699 aaKnown RBP eCLIP16.95■□□□□ 0.3
PRKD1-209ENST00000616995 ARMT1Q9H993 441 aa16.95■□□□□ 0.3
PRKD1-209ENST00000616995 NRBP1Q9UHY1 535 aa16.95■□□□□ 0.3
PRKD1-209ENST00000616995 MED23Q9ULK4 1368 aa16.95■□□□□ 0.3
PRKD1-209ENST00000616995 CASP7P55210 303 aa16.95■□□□□ 0.3
PRKD1-209ENST00000616995 LRMPQ12912 555 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms