RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 TRIM37O94972 964 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 CTSWP56202 376 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 SEPT12Q8IYM1 358 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 RTL9Q8NET4 1388 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 PCCAP05165 728 aaPredicted RBP10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 MCM4P33991 863 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 TNNT3P45378 269 aaPredicted RBP10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 TEX11Q8IYF3 940 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 CBFA2T2O43439 604 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 ZBTB38Q8NAP3 1195 aaPredicted RBP10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 DBNDD2Q9BQY9 259 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 GJA3Q9Y6H8 435 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 TTLL7Q6ZT98 887 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 DIP2BQ9P265 1576 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 MPNDQ8N594 471 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 SMTNL1A8MU46 457 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 PRC1O43663 620 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 MBD4O95243 580 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 MATR3P43243 847 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 KLHDC4Q8TBB5 520 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 TBC1D22AQ8WUA7 517 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 TBC1D2Q9BYX2 928 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 PDCL3Q9H2J4 239 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 JAG2Q9Y219 1238 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 E9PCH4 1651 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 MAP3K11Q16584 847 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 PPFIBP1Q86W92 1011 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 TCP11L1Q9NUJ3 509 aa10.93□□□□□ -0.66
CLTCL1-208ENST00000615606 ABCA6Q8N139 1617 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 PTCH1Q13635 1447 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 TRPM1Q7Z4N2 1603 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 STX6O43752 255 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 PPP1R12BO60237 982 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 CCDC24Q8N4L8 307 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 PYM1Q9BRP8 204 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 LUC7LQ9NQ29 371 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 ZFYVE27Q5T4F4 411 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 USPL1Q5W0Q7 1092 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 NIM1KQ8IY84 436 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 CCP110O43303 1012 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 KIF20AO95235 890 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 CHMLP26374 656 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 RAB11FIP4Q86YS3 637 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 SCLT1Q96NL6 688 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 SH2D4AQ9H788 454 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 ABCC4O15439 1325 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 TAF5LO75529 589 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 SSFA2P28290 1259 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 CERKQ8TCT0 537 aa10.92□□□□□ -0.66
CLTCL1-208ENST00000615606 LAMC1P11047 1609 aa10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 PPRC1Q5VV67 1664 aaKnown RBP10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 Q6ZUG5 572 aa10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 APPBP2Q92624 585 aa10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 CNKSR1Q969H4 720 aa10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 HOOK2Q96ED9 719 aa10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 SETBP1Q9Y6X0 1596 aa10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 AFF2P51816 1311 aa10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 BMP15O95972 392 aa10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 MSL1Q68DK7 614 aa10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 VSIG10Q8N0Z9 540 aa10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 CALML4Q96GE6 196 aa10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 ZSCAN16Q9H4T2 348 aaPredicted RBP10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 RBM25P49756 843 aaKnown RBP10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 GIGYF2Q6Y7W6 1299 aaKnown RBP10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 ZC3H13Q5T200 1668 aaKnown RBP10.91□□□□□ -0.66
CLTCL1-208ENST00000615606 PNMA6EA0A0J9YXQ4 647 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 CREB3L3Q68CJ9 461 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 TXLNBQ8N3L3 684 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 LRRC2Q9BYS8 371 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 ZBTB1Q9Y2K1 713 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 PTPRMP28827 1452 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 JCADQ9P266 1359 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 B4DLN1 442 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 MRPL12P52815 198 aaKnown RBP10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 BEND3Q5T5X7 828 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 C2CD5Q86YS7 1000 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 FBXO3Q9UK99 471 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 ATP2B4P23634 1241 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 CCDC173Q0VFZ6 552 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 TMX3Q96JJ7 454 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 TSG101Q99816 390 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 ALG1Q9BT22 464 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 CTAGE5O15320 804 aa10.9□□□□□ -0.66
CLTCL1-208ENST00000615606 NCAPD2Q15021 1401 aa10.9□□□□□ -0.67
CLTCL1-208ENST00000615606 AMPD3Q01432 767 aa10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 DHX32Q7L7V1 743 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 SPATA5Q8NB90 893 aa10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 USP44Q9H0E7 712 aa10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 C1orf167Q5SNV9 1468 aa10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 MADDQ8WXG6 1647 aa10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 PPIP5K2O43314 1243 aa10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 CHMP4BP1P59074 171 aa10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 KBTBD3Q8NAB2 608 aa10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 HEG1Q9ULI3 1381 aa10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 UBA7P41226 1012 aa10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 TCEANC2Q96MN5 208 aa10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 HEATR3Q7Z4Q2 680 aa10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 RRP36Q96EU6 259 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-208ENST00000615606 USP31Q70CQ4 1352 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms