RNA–Protein interactions for RNA: ENST00000615024.4

RDM1-217, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 617 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-217ENST00000615024 NKX2-3Q8TAU0 364 aa5.35□□□□□ -1.55
RDM1-217ENST00000615024 KLRG1Q96E93 195 aa5.35□□□□□ -1.55
RDM1-217ENST00000615024 TEX13AQ9BXU3 409 aaPredicted RBP5.35□□□□□ -1.55
RDM1-217ENST00000615024 IRX2Q9BZI1 471 aaPredicted RBP5.35□□□□□ -1.55
RDM1-217ENST00000615024 NMRK2Q9NPI5 230 aa5.35□□□□□ -1.55
RDM1-217ENST00000615024 USP42Q9H9J4 1324 aaKnown RBP5.34□□□□□ -1.55
RDM1-217ENST00000615024 IQCA1LA6NCM1 817 aa5.34□□□□□ -1.55
RDM1-217ENST00000615024 GYS1P13807 737 aa5.34□□□□□ -1.55
RDM1-217ENST00000615024 PDE6BP35913 854 aa5.34□□□□□ -1.55
RDM1-217ENST00000615024 SERPINB4P48594 390 aa5.34□□□□□ -1.55
RDM1-217ENST00000615024 MARSP56192 900 aaKnown RBP5.34□□□□□ -1.55
RDM1-217ENST00000615024 SEMA3FQ13275 785 aa5.34□□□□□ -1.55
RDM1-217ENST00000615024 ITPK1Q13572 414 aa5.34□□□□□ -1.55
RDM1-217ENST00000615024 EIF4A2Q14240 407 aaKnown RBP5.34□□□□□ -1.55
RDM1-217ENST00000615024 AKAP4Q5JQC9 854 aa5.34□□□□□ -1.55
RDM1-217ENST00000615024 PPP1R18Q6NYC8 613 aa5.34□□□□□ -1.55
RDM1-217ENST00000615024 ZNF622Q969S3 477 aaKnown RBP eCLIP5.34□□□□□ -1.55
RDM1-217ENST00000615024 RRAGCQ9HB90 399 aa5.34□□□□□ -1.55
RDM1-217ENST00000615024 POLKQ9UBT6 870 aa5.34□□□□□ -1.55
RDM1-217ENST00000615024 ZNF652Q9Y2D9 606 aa5.34□□□□□ -1.55
RDM1-217ENST00000615024 COL5A3P25940 1745 aaPredicted RBP5.34□□□□□ -1.56
RDM1-217ENST00000615024 KCPQ6ZWJ8 1503 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 NCAPD2Q15021 1401 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 CLSPNQ9HAW4 1339 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 ANKRD33BA6NCL7 494 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L3A6NCW0 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L4A6NCW7 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L15C9J2P7 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L10C9JJH3 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L13C9JLJ4 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L12C9JPN9 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L11C9JVI0 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L21D6R901 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L18D6R9N7 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L22D6RA61 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L17D6RBQ6 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L19D6RCP7 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L20D6RJB6 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 GTF2E1P29083 439 aaPredicted RBP5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L24Q0WX57 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 KMT5BQ4FZB7 885 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 CRTC2Q53ET0 693 aaPredicted RBP5.33□□□□□ -1.56
RDM1-217ENST00000615024 USPL1Q5W0Q7 1092 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 SULT6B1Q6IMI4 303 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L2Q6R6M4 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 USP17L1Q7RTZ2 530 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 C2CD5Q86YS7 1000 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 HELBQ8NG08 1087 aaPredicted RBP5.33□□□□□ -1.56
RDM1-217ENST00000615024 HLA-CQ95604 372 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 CNKSR1Q969H4 720 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 CFAP53Q96M91 514 aa5.33□□□□□ -1.56
RDM1-217ENST00000615024 KDRP35968 1356 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 COL15A1P39059 1388 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 GLTPD2A6NH11 291 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 SMARCA5O60264 1052 aaPredicted RBP5.32□□□□□ -1.56
RDM1-217ENST00000615024 COPS2P61201 443 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 GUCA2AQ02747 115 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 FUT2Q10981 343 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 PTK7Q13308 1070 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 MTMR2Q13614 643 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 ERFEQ4G0M1 354 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 CNBD1Q8NA66 436 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 GAS2L2Q8NHY3 880 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 C1orf216Q8TAB5 229 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 UBXN4Q92575 508 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 TAOK3Q9H2K8 898 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 NARFQ9UHQ1 456 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 BRCA1P38398 1863 aaKnown RBP5.32□□□□□ -1.56
RDM1-217ENST00000615024 SCN11AQ9UI33 1791 aa5.32□□□□□ -1.56
RDM1-217ENST00000615024 CARMIL3Q8ND23 1372 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 USP17L5A8MUK1 530 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 SERPINB2P05120 415 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 HSPA1AP0DMV8 641 aaKnown RBP5.31□□□□□ -1.56
RDM1-217ENST00000615024 HSPA1BP0DMV9 641 aaKnown RBP5.31□□□□□ -1.56
RDM1-217ENST00000615024 CHRNA5P30532 468 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 PRELPP51888 382 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 NR6A1Q15406 480 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 GRIPAP1Q4V328 841 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 BICDL1Q6ZP65 573 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 JMYQ8N9B5 988 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 FAM174AQ8TBP5 190 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 RTF1Q92541 710 aaKnown RBP5.31□□□□□ -1.56
RDM1-217ENST00000615024 SETDB2Q96T68 719 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 PRR14Q9BWN1 585 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 CARD14Q9BXL6 1004 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 PCGF6Q9BYE7 350 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 SLC52A2Q9HAB3 445 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.31□□□□□ -1.56
RDM1-217ENST00000615024 SRP68Q9UHB9 627 aaKnown RBP5.31□□□□□ -1.56
RDM1-217ENST00000615024 NUDCQ9Y266 331 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 TIAM2Q8IVF5 1701 aa5.31□□□□□ -1.56
RDM1-217ENST00000615024 SBF1O95248 1867 aa5.3□□□□□ -1.56
RDM1-217ENST00000615024 CCDC88AQ3V6T2 1871 aa5.3□□□□□ -1.56
RDM1-217ENST00000615024 POLRMTO00411 1230 aaKnown RBP5.3□□□□□ -1.56
RDM1-217ENST00000615024 LCE2BO14633 110 aa5.3□□□□□ -1.56
RDM1-217ENST00000615024 U2SURPO15042 1029 aaKnown RBP5.3□□□□□ -1.56
RDM1-217ENST00000615024 ACTN4O43707 911 aaKnown RBP5.3□□□□□ -1.56
RDM1-217ENST00000615024 DIAPH1O60610 1272 aaKnown RBP5.3□□□□□ -1.56
RDM1-217ENST00000615024 TAGLNQ01995 201 aaKnown RBP5.3□□□□□ -1.56
RDM1-217ENST00000615024 NR1H3Q13133 447 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms