RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 TPM1P09493 284 aa14.55□□□□□ -0.08
MSH6-213ENST00000614496 SYKP43405 635 aa14.55□□□□□ -0.08
MSH6-213ENST00000614496 IFIT5Q13325 482 aaKnown RBP14.55□□□□□ -0.08
MSH6-213ENST00000614496 KCNF1Q9H3M0 494 aa14.55□□□□□ -0.08
MSH6-213ENST00000614496 RNF113AO15541 343 aaKnown RBP14.55□□□□□ -0.08
MSH6-213ENST00000614496 NCOA7Q8NI08 942 aa14.55□□□□□ -0.08
MSH6-213ENST00000614496 CPLX3Q8WVH0 158 aa14.55□□□□□ -0.08
MSH6-213ENST00000614496 AIDAQ96BJ3 306 aa14.55□□□□□ -0.08
MSH6-213ENST00000614496 PGBD1Q96JS3 809 aa14.55□□□□□ -0.08
MSH6-213ENST00000614496 CBFA2T2O43439 604 aa14.54□□□□□ -0.08
MSH6-213ENST00000614496 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.54□□□□□ -0.08
MSH6-213ENST00000614496 DDX17Q92841 729 aaKnown RBP14.54□□□□□ -0.08
MSH6-213ENST00000614496 ALG1Q9BT22 464 aa14.54□□□□□ -0.08
MSH6-213ENST00000614496 ADCY9O60503 1353 aa14.54□□□□□ -0.08
MSH6-213ENST00000614496 A0A1B0GUL7 405 aa14.54□□□□□ -0.08
MSH6-213ENST00000614496 KIF2AO00139 706 aaPredicted RBP14.54□□□□□ -0.08
MSH6-213ENST00000614496 IL15P40933 162 aaPredicted RBP14.54□□□□□ -0.08
MSH6-213ENST00000614496 UBASH3AP57075 661 aa14.54□□□□□ -0.08
MSH6-213ENST00000614496 ZSWIM4Q9H7M6 989 aa14.54□□□□□ -0.08
MSH6-213ENST00000614496 CDKL5O76039 1030 aa14.54□□□□□ -0.08
MSH6-213ENST00000614496 SLU7O95391 586 aaKnown RBP14.54□□□□□ -0.08
MSH6-213ENST00000614496 TNNT3P45378 269 aaPredicted RBP14.54□□□□□ -0.08
MSH6-213ENST00000614496 METAP2P50579 478 aaKnown RBP eCLIP14.54□□□□□ -0.08
MSH6-213ENST00000614496 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
MSH6-213ENST00000614496 ELF2Q15723 593 aa14.54□□□□□ -0.08
MSH6-213ENST00000614496 LDHAL6AQ6ZMR3 332 aa14.54□□□□□ -0.08
MSH6-213ENST00000614496 AKAP2Q9Y2D5 859 aa14.54□□□□□ -0.08
MSH6-213ENST00000614496 E7EWF7 191 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 GTF2E1P29083 439 aaPredicted RBP14.53□□□□□ -0.08
MSH6-213ENST00000614496 TRIM22Q8IYM9 498 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 KCNG4Q8TDN1 519 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 PREX1Q8TCU6 1659 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 DLC1Q96QB1 1528 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 USP31Q70CQ4 1352 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 PLEKHG1Q9ULL1 1385 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 AP5Z1O43299 807 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 CCP110O43303 1012 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 KAT6BQ8WYB5 2073 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 ELP1O95163 1332 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 SIGLEC1Q9BZZ2 1709 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 GOLGA8AA7E2F4 631 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 A1BGP04217 495 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 IGKV5-2P06315 115 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 TDO2P48775 406 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 SART3Q15020 963 aaKnown RBP14.53□□□□□ -0.08
MSH6-213ENST00000614496 TMCO3Q6UWJ1 677 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 SLC52A2Q9HAB3 445 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 ZNF215Q9UL58 517 aaPredicted RBP14.53□□□□□ -0.08
MSH6-213ENST00000614496 MYO5BQ9ULV0 1848 aa14.53□□□□□ -0.08
MSH6-213ENST00000614496 SLC26A6Q9BXS9 759 aa14.52□□□□□ -0.08
MSH6-213ENST00000614496 IARSP41252 1262 aaKnown RBP14.52□□□□□ -0.08
MSH6-213ENST00000614496 ATP2B3Q16720 1220 aa14.52□□□□□ -0.08
MSH6-213ENST00000614496 KRT222Q8N1A0 295 aa14.52□□□□□ -0.08
MSH6-213ENST00000614496 IFIT3O14879 490 aaKnown RBP14.52□□□□□ -0.09
MSH6-213ENST00000614496 LRRC8AQ8IWT6 810 aa14.52□□□□□ -0.09
MSH6-213ENST00000614496 TDRD7Q8NHU6 1098 aaKnown RBP14.52□□□□□ -0.09
MSH6-213ENST00000614496 CCDC66A2RUB6 948 aa14.52□□□□□ -0.09
MSH6-213ENST00000614496 GPHNQ9NQX3 736 aaPredicted RBP14.52□□□□□ -0.09
MSH6-213ENST00000614496 RESTQ13127 1097 aa14.51□□□□□ -0.09
MSH6-213ENST00000614496 PTPN21Q16825 1174 aa14.51□□□□□ -0.09
MSH6-213ENST00000614496 TMEM67Q5HYA8 995 aa14.51□□□□□ -0.09
MSH6-213ENST00000614496 CCDC150Q8NCX0 1101 aa14.51□□□□□ -0.09
MSH6-213ENST00000614496 LLPHQ9BRT6 129 aaKnown RBP14.51□□□□□ -0.09
MSH6-213ENST00000614496 XPO4Q9C0E2 1151 aaKnown RBP14.51□□□□□ -0.09
MSH6-213ENST00000614496 NAPBQ9H115 298 aa14.51□□□□□ -0.09
MSH6-213ENST00000614496 OGFRQ9NZT2 677 aa14.51□□□□□ -0.09
MSH6-213ENST00000614496 CEP170BQ9Y4F5 1589 aaPredicted RBP14.51□□□□□ -0.09
MSH6-213ENST00000614496 MTX1Q13505 466 aa14.51□□□□□ -0.09
MSH6-213ENST00000614496 SLC9C2Q5TAH2 1124 aa14.51□□□□□ -0.09
MSH6-213ENST00000614496 VPS37DQ86XT2 251 aa14.51□□□□□ -0.09
MSH6-213ENST00000614496 GNG11P61952 73 aa14.5□□□□□ -0.09
MSH6-213ENST00000614496 CCDC144BQ3MJ40 725 aa14.5□□□□□ -0.09
MSH6-213ENST00000614496 LRRC24Q50LG9 513 aa14.5□□□□□ -0.09
MSH6-213ENST00000614496 SPECC1Q5M775 1068 aa14.5□□□□□ -0.09
MSH6-213ENST00000614496 NAA16Q6N069 864 aaPredicted RBP14.5□□□□□ -0.09
MSH6-213ENST00000614496 PPFIBP1Q86W92 1011 aa14.5□□□□□ -0.09
MSH6-213ENST00000614496 NSUN7Q8NE18 718 aaKnown RBP14.5□□□□□ -0.09
MSH6-213ENST00000614496 PCMTD1Q96MG8 357 aaPredicted RBP14.5□□□□□ -0.09
MSH6-213ENST00000614496 PCDHA7Q9UN72 937 aa14.5□□□□□ -0.09
MSH6-213ENST00000614496 MINDY4BA8MYZ0 360 aa14.5□□□□□ -0.09
MSH6-213ENST00000614496 PFKFB2O60825 505 aa14.5□□□□□ -0.09
MSH6-213ENST00000614496 TSR1Q2NL82 804 aaKnown RBP14.5□□□□□ -0.09
MSH6-213ENST00000614496 ZNF397Q8NF99 534 aaPredicted RBP14.5□□□□□ -0.09
MSH6-213ENST00000614496 GTPBP4Q9BZE4 634 aaKnown RBP14.5□□□□□ -0.09
MSH6-213ENST00000614496 HELLSQ9NRZ9 838 aa14.5□□□□□ -0.09
MSH6-213ENST00000614496 SLC12A7Q9Y666 1083 aa14.5□□□□□ -0.09
MSH6-213ENST00000614496 HSPD1P10809 573 aaKnown RBP14.5□□□□□ -0.09
MSH6-213ENST00000614496 FAM89AQ96GI7 184 aa14.5□□□□□ -0.09
MSH6-213ENST00000614496 EYA2O00167 538 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 PTPN12Q05209 780 aaKnown RBP14.49□□□□□ -0.09
MSH6-213ENST00000614496 ARHGAP29Q52LW3 1261 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 CCDC102BQ68D86 513 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 HELBQ8NG08 1087 aaPredicted RBP14.49□□□□□ -0.09
MSH6-213ENST00000614496 HAUS7Q99871 368 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 UTP14AQ9BVJ6 771 aaKnown RBP14.49□□□□□ -0.09
MSH6-213ENST00000614496 COPRSQ9NQ92 184 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 GJB4Q9NTQ9 266 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 SPTLC3Q9NUV7 552 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 ZNF202O95125 648 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 SKIDA1Q1XH10 827 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms