RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 GALNT12Q8IXK2 581 aa9.29□□□□□ -0.92
SCAMP1-205ENST00000614488 IL22RA1Q8N6P7 574 aa9.29□□□□□ -0.92
SCAMP1-205ENST00000614488 TMEM102Q8N9M5 508 aaPredicted RBP9.29□□□□□ -0.92
SCAMP1-205ENST00000614488 CDC27P30260 824 aa9.28□□□□□ -0.92
SCAMP1-205ENST00000614488 ORC1Q13415 861 aa9.28□□□□□ -0.92
SCAMP1-205ENST00000614488 MAP4K3Q8IVH8 894 aa9.28□□□□□ -0.92
SCAMP1-205ENST00000614488 NACC1Q96RE7 527 aa9.28□□□□□ -0.92
SCAMP1-205ENST00000614488 OSMRQ99650 979 aa9.28□□□□□ -0.92
SCAMP1-205ENST00000614488 ZKSCAN3Q9BRR0 538 aa9.28□□□□□ -0.92
SCAMP1-205ENST00000614488 NIF3L1Q9GZT8 377 aa9.28□□□□□ -0.92
SCAMP1-205ENST00000614488 ADAM19Q9H013 955 aa9.28□□□□□ -0.92
SCAMP1-205ENST00000614488 PDE2AO00408 941 aaPredicted RBP9.27□□□□□ -0.93
SCAMP1-205ENST00000614488 APBA3O96018 575 aa9.27□□□□□ -0.93
SCAMP1-205ENST00000614488 PEAR1Q5VY43 1037 aaPredicted RBP9.27□□□□□ -0.93
SCAMP1-205ENST00000614488 FBXO11Q86XK2 927 aa9.27□□□□□ -0.93
SCAMP1-205ENST00000614488 ZSCAN29Q8IWY8 852 aaPredicted RBP9.27□□□□□ -0.93
SCAMP1-205ENST00000614488 DCAF11Q8TEB1 546 aa9.27□□□□□ -0.93
SCAMP1-205ENST00000614488 POP1Q99575 1024 aaKnown RBP9.27□□□□□ -0.93
SCAMP1-205ENST00000614488 LACRTQ9GZZ8 138 aa9.27□□□□□ -0.93
SCAMP1-205ENST00000614488 PPME1Q9Y570 386 aa9.27□□□□□ -0.93
SCAMP1-205ENST00000614488 FAM177BA6PVY3 158 aa9.26□□□□□ -0.93
SCAMP1-205ENST00000614488 EIF1AYO14602 144 aaKnown RBP9.26□□□□□ -0.93
SCAMP1-205ENST00000614488 TREHO43280 583 aa9.26□□□□□ -0.93
SCAMP1-205ENST00000614488 IGHA1P01876 353 aa9.26□□□□□ -0.93
SCAMP1-205ENST00000614488 ITGB2P05107 769 aa9.26□□□□□ -0.93
SCAMP1-205ENST00000614488 DSC3Q14574 896 aa9.26□□□□□ -0.93
SCAMP1-205ENST00000614488 ASB16Q96NS5 453 aa9.26□□□□□ -0.93
SCAMP1-205ENST00000614488 CSRNP1Q96S65 589 aa9.26□□□□□ -0.93
SCAMP1-205ENST00000614488 BHLHE41Q9C0J9 482 aaPredicted RBP9.26□□□□□ -0.93
SCAMP1-205ENST00000614488 POLR3DP05423 398 aaPredicted RBP9.25□□□□□ -0.93
SCAMP1-205ENST00000614488 USPL1Q5W0Q7 1092 aa9.25□□□□□ -0.93
SCAMP1-205ENST00000614488 NXPE3Q969Y0 559 aa9.25□□□□□ -0.93
SCAMP1-205ENST00000614488 LATS2Q9NRM7 1088 aa9.25□□□□□ -0.93
SCAMP1-205ENST00000614488 DEAF1O75398 565 aaPredicted RBP9.24□□□□□ -0.93
SCAMP1-205ENST00000614488 CHRNA4P43681 627 aa9.24□□□□□ -0.93
SCAMP1-205ENST00000614488 ADAMTSL4Q6UY14 1074 aa9.24□□□□□ -0.93
SCAMP1-205ENST00000614488 CD163Q86VB7 1156 aa9.24□□□□□ -0.93
SCAMP1-205ENST00000614488 HOMEZQ8IX15 550 aa9.24□□□□□ -0.93
SCAMP1-205ENST00000614488 HHIPQ96QV1 700 aa9.24□□□□□ -0.93
SCAMP1-205ENST00000614488 A0A1W2PP55 124 aa9.23□□□□□ -0.93
SCAMP1-205ENST00000614488 C1QTNF9BB2RNN3 333 aa9.23□□□□□ -0.93
SCAMP1-205ENST00000614488 TRPA1O75762 1119 aa9.23□□□□□ -0.93
SCAMP1-205ENST00000614488 SETDB1Q15047 1291 aa9.23□□□□□ -0.93
SCAMP1-205ENST00000614488 GRIK4Q16099 956 aa9.23□□□□□ -0.93
SCAMP1-205ENST00000614488 KIAA0319Q5VV43 1072 aa9.23□□□□□ -0.93
SCAMP1-205ENST00000614488 CCDC74AQ96AQ1 378 aa9.23□□□□□ -0.93
SCAMP1-205ENST00000614488 SOX13Q9UN79 622 aa9.23□□□□□ -0.93
SCAMP1-205ENST00000614488 C9orf172C9J069 976 aa9.22□□□□□ -0.93
SCAMP1-205ENST00000614488 H3BRJ5 948 aa9.22□□□□□ -0.93
SCAMP1-205ENST00000614488 DLL1O00548 723 aa9.22□□□□□ -0.93
SCAMP1-205ENST00000614488 EPHA1P21709 976 aa9.22□□□□□ -0.93
SCAMP1-205ENST00000614488 CABP4P57796 275 aa9.22□□□□□ -0.93
SCAMP1-205ENST00000614488 PLCB3Q01970 1234 aa9.22□□□□□ -0.93
SCAMP1-205ENST00000614488 FMR1Q06787 632 aaKnown RBP eCLIP9.22□□□□□ -0.93
SCAMP1-205ENST00000614488 GPAT2Q6NUI2 795 aa9.22□□□□□ -0.93
SCAMP1-205ENST00000614488 FAM117BQ6P1L5 589 aa9.22□□□□□ -0.93
SCAMP1-205ENST00000614488 BSNDQ8WZ55 320 aa9.22□□□□□ -0.93
SCAMP1-205ENST00000614488 LENG1Q96BZ8 264 aaPredicted RBP9.22□□□□□ -0.93
SCAMP1-205ENST00000614488 NPHS2Q9NP85 383 aa9.22□□□□□ -0.93
SCAMP1-205ENST00000614488 SELPP16109 830 aa9.21□□□□□ -0.94
SCAMP1-205ENST00000614488 NRG1Q02297 640 aaPredicted RBP9.21□□□□□ -0.94
SCAMP1-205ENST00000614488 CCNJLQ8IV13 435 aa9.21□□□□□ -0.94
SCAMP1-205ENST00000614488 WNT8BQ93098 351 aa9.21□□□□□ -0.94
SCAMP1-205ENST00000614488 SH2B1Q9NRF2 756 aaPredicted RBP9.21□□□□□ -0.94
SCAMP1-205ENST00000614488 LINC01387J3KSC0 135 aa9.2□□□□□ -0.94
SCAMP1-205ENST00000614488 MSTNO14793 375 aa9.2□□□□□ -0.94
SCAMP1-205ENST00000614488 ENOX2Q16206 610 aaKnown RBP9.2□□□□□ -0.94
SCAMP1-205ENST00000614488 IGF2-ASQ6U949 168 aa9.2□□□□□ -0.94
SCAMP1-205ENST00000614488 SPOCK3Q9BQ16 436 aa9.2□□□□□ -0.94
SCAMP1-205ENST00000614488 LIN7BQ9HAP6 207 aa9.2□□□□□ -0.94
SCAMP1-205ENST00000614488 FSCN2O14926 492 aa9.19□□□□□ -0.94
SCAMP1-205ENST00000614488 PROCP04070 461 aa9.19□□□□□ -0.94
SCAMP1-205ENST00000614488 PIP4K2BP78356 416 aa9.19□□□□□ -0.94
SCAMP1-205ENST00000614488 ADGRE1Q14246 886 aa9.19□□□□□ -0.94
SCAMP1-205ENST00000614488 SHISA2Q6UWI4 295 aa9.19□□□□□ -0.94
SCAMP1-205ENST00000614488 KLHL23Q8NBE8 558 aa9.19□□□□□ -0.94
SCAMP1-205ENST00000614488 TCF12Q99081 682 aa9.19□□□□□ -0.94
SCAMP1-205ENST00000614488 PNMA6FA0A0J9YX94 578 aa9.18□□□□□ -0.94
SCAMP1-205ENST00000614488 PRPF40BQ6NWY9 871 aaKnown RBP9.18□□□□□ -0.94
SCAMP1-205ENST00000614488 TXNDC11Q6PKC3 985 aa9.18□□□□□ -0.94
SCAMP1-205ENST00000614488 ASAP3Q8TDY4 903 aa9.18□□□□□ -0.94
SCAMP1-205ENST00000614488 EHD4Q9H223 541 aa9.18□□□□□ -0.94
SCAMP1-205ENST00000614488 OSGEPQ9NPF4 335 aa9.18□□□□□ -0.94
SCAMP1-205ENST00000614488 TM4SF5O14894 197 aa9.17□□□□□ -0.94
SCAMP1-205ENST00000614488 MBTPS1Q14703 1052 aa9.17□□□□□ -0.94
SCAMP1-205ENST00000614488 VN1R5Q7Z5H4 357 aa9.17□□□□□ -0.94
SCAMP1-205ENST00000614488 GALNT11Q8NCW6 608 aa9.17□□□□□ -0.94
SCAMP1-205ENST00000614488 FBF1Q8TES7 1133 aa9.17□□□□□ -0.94
SCAMP1-205ENST00000614488 MRPL18Q9H0U6 180 aaKnown RBP9.17□□□□□ -0.94
SCAMP1-205ENST00000614488 SEC31BQ9NQW1 1179 aa9.17□□□□□ -0.94
SCAMP1-205ENST00000614488 USP21Q9UK80 565 aa9.17□□□□□ -0.94
SCAMP1-205ENST00000614488 TRAK1Q9UPV9 953 aa9.17□□□□□ -0.94
SCAMP1-205ENST00000614488 A0A096LPE4 126 aa9.16□□□□□ -0.94
SCAMP1-205ENST00000614488 A0A1W2PPZ6 126 aa9.16□□□□□ -0.94
SCAMP1-205ENST00000614488 GADD45BO75293 160 aaPredicted RBP9.16□□□□□ -0.94
SCAMP1-205ENST00000614488 GATA4P43694 442 aa9.16□□□□□ -0.94
SCAMP1-205ENST00000614488 COL19A1Q14993 1142 aa9.16□□□□□ -0.94
SCAMP1-205ENST00000614488 METTL12A8MUP2 240 aa9.15□□□□□ -0.94
SCAMP1-205ENST00000614488 CDC25BP30305 580 aa9.15□□□□□ -0.94
SCAMP1-205ENST00000614488 CD68P34810 354 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms