RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 MTIF2P46199 727 aaKnown RBP15.82■□□□□ 0.12
GGA3-220ENST00000613421 ACSBG1Q96GR2 724 aa15.82■□□□□ 0.12
GGA3-220ENST00000613421 AATKQ6ZMQ8 1374 aa15.82■□□□□ 0.12
GGA3-220ENST00000613421 GNAT2P19087 354 aa15.82■□□□□ 0.12
GGA3-220ENST00000613421 NAA16Q6N069 864 aaPredicted RBP15.82■□□□□ 0.12
GGA3-220ENST00000613421 DBNDD2Q9BQY9 259 aa15.82■□□□□ 0.12
GGA3-220ENST00000613421 SLC52A2Q9HAB3 445 aa15.82■□□□□ 0.12
GGA3-220ENST00000613421 FAM227BQ96M60 508 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 TMX1Q9H3N1 280 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 KIF20AO95235 890 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 PPP1R1BQ9UD71 204 aaPredicted RBP15.81■□□□□ 0.12
GGA3-220ENST00000613421 GSTO1P78417 241 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 CCDC129Q6ZRS4 1044 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 BRAPQ7Z569 592 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 ZCCHC11Q5TAX3 1644 aaKnown RBP15.81■□□□□ 0.12
GGA3-220ENST00000613421 TIMM10P62072 90 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 TSPYL1Q9H0U9 437 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 RBSNQ9H1K0 784 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 VAT1LQ9HCJ6 419 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 CDC42BPAQ5VT25 1732 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 A0A1B0GUL7 405 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 HELBQ8NG08 1087 aaPredicted RBP15.81■□□□□ 0.12
GGA3-220ENST00000613421 CRACR2AQ9BSW2 395 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 STX8Q9UNK0 236 aa15.81■□□□□ 0.12
GGA3-220ENST00000613421 ATP7BP35670 1465 aa15.8■□□□□ 0.12
GGA3-220ENST00000613421 USO1O60763 962 aaKnown RBP15.8■□□□□ 0.12
GGA3-220ENST00000613421 HSPA4P34932 840 aa15.8■□□□□ 0.12
GGA3-220ENST00000613421 JAKMIP3Q5VZ66 844 aa15.8■□□□□ 0.12
GGA3-220ENST00000613421 SF3B2Q13435 895 aaKnown RBP15.8■□□□□ 0.12
GGA3-220ENST00000613421 RFC4P35249 363 aa15.8■□□□□ 0.12
GGA3-220ENST00000613421 SMARCC1Q92922 1105 aaPredicted RBP15.8■□□□□ 0.12
GGA3-220ENST00000613421 CENPHQ9H3R5 247 aa15.8■□□□□ 0.12
GGA3-220ENST00000613421 RMND1Q9NWS8 449 aa15.8■□□□□ 0.12
GGA3-220ENST00000613421 MLH3Q9UHC1 1453 aa15.8■□□□□ 0.12
GGA3-220ENST00000613421 MAGEB6P1A0A0J9YX57 407 aa15.8■□□□□ 0.12
GGA3-220ENST00000613421 AFMP43652 599 aa15.8■□□□□ 0.12
GGA3-220ENST00000613421 DDB1Q16531 1140 aa15.8■□□□□ 0.12
GGA3-220ENST00000613421 ATL3Q6DD88 541 aa15.8■□□□□ 0.12
GGA3-220ENST00000613421 MAGEB6Q8N7X4 407 aa15.8■□□□□ 0.12
GGA3-220ENST00000613421 IQGAP3Q86VI3 1631 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 ADCY10Q96PN6 1610 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 IDEP14735 1019 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 MAP9Q49MG5 647 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 UBA5Q9GZZ9 404 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 N4BP3O15049 544 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 GCKRQ14397 625 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 CCDC178Q5BJE1 867 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 FAM114A1Q8IWE2 563 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 NLRP3Q96P20 1036 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 LTKP29376 864 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 CCDC191Q8NCU4 936 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 SETDB2Q96T68 719 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 USP44Q9H0E7 712 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 GNG11P61952 73 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 PPP4R3BQ5MIZ7 849 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 IL17REQ8NFR9 667 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 SSH3Q8TE77 659 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 CUL5Q93034 780 aa15.79■□□□□ 0.12
GGA3-220ENST00000613421 RTL9Q8NET4 1388 aa15.78■□□□□ 0.12
GGA3-220ENST00000613421 ERICH4A6NGS2 130 aa15.78■□□□□ 0.12
GGA3-220ENST00000613421 TSPY3P0CV98 308 aa15.78■□□□□ 0.12
GGA3-220ENST00000613421 TSPY8P0CW00 308 aa15.78■□□□□ 0.12
GGA3-220ENST00000613421 MCM3P25205 808 aa15.78■□□□□ 0.12
GGA3-220ENST00000613421 ZNF445P59923 1031 aa15.78■□□□□ 0.12
GGA3-220ENST00000613421 TNIP1Q15025 636 aa15.78■□□□□ 0.12
GGA3-220ENST00000613421 TDRD12Q587J7 1177 aaKnown RBP15.78■□□□□ 0.12
GGA3-220ENST00000613421 TRIM75PA6NK02 468 aa15.78■□□□□ 0.12
GGA3-220ENST00000613421 RRAGBQ5VZM2 374 aa15.78■□□□□ 0.12
GGA3-220ENST00000613421 FAM89AQ96GI7 184 aa15.78■□□□□ 0.12
GGA3-220ENST00000613421 TET3O43151 1660 aa15.78■□□□□ 0.12
GGA3-220ENST00000613421 VPS36Q86VN1 386 aa15.78■□□□□ 0.12
GGA3-220ENST00000613421 TRPM1Q7Z4N2 1603 aa15.77■□□□□ 0.12
GGA3-220ENST00000613421 HSP90AA4PQ58FG1 418 aa15.77■□□□□ 0.12
GGA3-220ENST00000613421 CTAGE1Q96RT6 745 aa15.77■□□□□ 0.12
GGA3-220ENST00000613421 LMBRD1Q9NUN5 540 aa15.77■□□□□ 0.12
GGA3-220ENST00000613421 GNAQP50148 359 aa15.77■□□□□ 0.12
GGA3-220ENST00000613421 MIGA1Q8NAN2 632 aa15.77■□□□□ 0.12
GGA3-220ENST00000613421 TRIM47Q96LD4 638 aa15.77■□□□□ 0.12
GGA3-220ENST00000613421 PRDM10Q9NQV6 1147 aa15.77■□□□□ 0.12
GGA3-220ENST00000613421 METP08581 1390 aa15.77■□□□□ 0.12
GGA3-220ENST00000613421 SSH2Q76I76 1423 aa15.77■□□□□ 0.11
GGA3-220ENST00000613421 CALM1P0DP23 149 aa15.77■□□□□ 0.11
GGA3-220ENST00000613421 CALM2P0DP24 149 aa15.77■□□□□ 0.11
GGA3-220ENST00000613421 CALM3P0DP25 149 aa15.77■□□□□ 0.11
GGA3-220ENST00000613421 LUZP1Q86V48 1076 aa15.77■□□□□ 0.11
GGA3-220ENST00000613421 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.77■□□□□ 0.112e-10■■■□□ 18.4
GGA3-220ENST00000613421 EFCAB6Q5THR3 1501 aa15.77■□□□□ 0.11
GGA3-220ENST00000613421 KIAA0754O94854 1291 aa15.77■□□□□ 0.11
GGA3-220ENST00000613421 LMOD1P29536 600 aaPredicted RBP15.77■□□□□ 0.11
GGA3-220ENST00000613421 LLPHQ9BRT6 129 aaKnown RBP15.77■□□□□ 0.11
GGA3-220ENST00000613421 POTEB2H3BUK9 544 aa15.76■□□□□ 0.11
GGA3-220ENST00000613421 PTGS1P23219 599 aa15.76■□□□□ 0.11
GGA3-220ENST00000613421 BCORL1Q5H9F3 1711 aa15.76■□□□□ 0.11
GGA3-220ENST00000613421 STAT6P42226 847 aa15.76■□□□□ 0.11
GGA3-220ENST00000613421 KBTBD3Q8NAB2 608 aa15.76■□□□□ 0.11
GGA3-220ENST00000613421 HLA-DOAP06340 250 aa15.76■□□□□ 0.11
GGA3-220ENST00000613421 RXRAP19793 462 aa15.76■□□□□ 0.11
GGA3-220ENST00000613421 CCDC40Q4G0X9 1142 aa15.76■□□□□ 0.11
GGA3-220ENST00000613421 SPAG1Q07617 926 aa15.76■□□□□ 0.11
GGA3-220ENST00000613421 EXOC1Q9NV70 894 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms