RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 UBE2Q1Q7Z7E8 422 aa9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 AGBL3Q8NEM8 1001 aa9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 SHISA4Q96DD7 197 aa9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 GMLQ99445 158 aa9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 POLR3GLQ9BT43 218 aa9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 ZBTB3Q9H5J0 574 aa9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 PRDM6Q9NQX0 595 aa9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 NSFL1CQ9UNZ2 370 aaKnown RBP9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 RANBP2P49792 3224 aaKnown RBP9.63□□□□□ -0.87
PTCHD3P1-201ENST00000612350 ZBTB7BO15156 539 aaPredicted RBP9.62□□□□□ -0.87
PTCHD3P1-201ENST00000612350 SLC9C1Q4G0N8 1177 aa9.62□□□□□ -0.87
PTCHD3P1-201ENST00000612350 KIF6Q6ZMV9 814 aa9.62□□□□□ -0.87
PTCHD3P1-201ENST00000612350 DDX46Q7L014 1031 aaKnown RBP9.62□□□□□ -0.87
PTCHD3P1-201ENST00000612350 UTP14AQ9BVJ6 771 aaKnown RBP9.62□□□□□ -0.87
PTCHD3P1-201ENST00000612350 MYOZ2Q9NPC6 264 aa9.62□□□□□ -0.87
PTCHD3P1-201ENST00000612350 DDX60Q8IY21 1712 aaKnown RBP9.62□□□□□ -0.87
PTCHD3P1-201ENST00000612350 CENPFP49454 3210 aa9.61□□□□□ -0.87
PTCHD3P1-201ENST00000612350 ERBB4Q15303 1308 aa9.61□□□□□ -0.87
PTCHD3P1-201ENST00000612350 C6orf229H3BNL8 230 aa9.61□□□□□ -0.87
PTCHD3P1-201ENST00000612350 MYCP01106 439 aaPredicted RBP9.61□□□□□ -0.87
PTCHD3P1-201ENST00000612350 HCLS1P14317 486 aaPredicted RBP9.61□□□□□ -0.87
PTCHD3P1-201ENST00000612350 GPSM2P81274 684 aa9.61□□□□□ -0.87
PTCHD3P1-201ENST00000612350 NBPF9Q3BBW0 867 aa9.61□□□□□ -0.87
PTCHD3P1-201ENST00000612350 RSBN1LQ6PCB5 846 aaPredicted RBP9.61□□□□□ -0.87
PTCHD3P1-201ENST00000612350 ANKRD13DQ6ZTN6 518 aa9.61□□□□□ -0.87
PTCHD3P1-201ENST00000612350 ARMC9Q7Z3E5 817 aa9.61□□□□□ -0.87
PTCHD3P1-201ENST00000612350 PHACTR3Q96KR7 559 aa9.61□□□□□ -0.87
PTCHD3P1-201ENST00000612350 MTMR10Q9NXD2 777 aa9.61□□□□□ -0.87
PTCHD3P1-201ENST00000612350 RRP7AQ9Y3A4 280 aaKnown RBP9.61□□□□□ -0.87
PTCHD3P1-201ENST00000612350 LAMB4A4D0S4 1761 aa9.6□□□□□ -0.87
PTCHD3P1-201ENST00000612350 USP17L8P0C7I0 530 aa9.6□□□□□ -0.87
PTCHD3P1-201ENST00000612350 NF2P35240 595 aa9.6□□□□□ -0.87
PTCHD3P1-201ENST00000612350 PRKG1Q13976 671 aa9.6□□□□□ -0.87
PTCHD3P1-201ENST00000612350 Q7L0L9 218 aa9.6□□□□□ -0.87
PTCHD3P1-201ENST00000612350 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTCHD3P1-201ENST00000612350 DEFB123Q8N688 67 aa9.6□□□□□ -0.87
PTCHD3P1-201ENST00000612350 EYA3Q99504 573 aa9.6□□□□□ -0.87
PTCHD3P1-201ENST00000612350 PTPN18Q99952 460 aa9.6□□□□□ -0.87
PTCHD3P1-201ENST00000612350 ZNF646O15015 1829 aaPredicted RBP9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 PSME4Q14997 1843 aa9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 ZBTB48P10074 688 aaPredicted RBP9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 DCAF8Q5TAQ9 597 aa9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 MCM10Q7L590 875 aa9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 TBC1D16Q8TBP0 767 aa9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 SH3TC2Q8TF17 1288 aa9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 CELF1Q92879 486 aaKnown RBP9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 SLC10A4Q96EP9 437 aa9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 WNK4Q96J92 1243 aa9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 STAP2Q9UGK3 403 aa9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 ANGEL1Q9UNK9 670 aaKnown RBP9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 FZD1Q9UP38 647 aa9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 NR2E3Q9Y5X4 410 aa9.59□□□□□ -0.87
PTCHD3P1-201ENST00000612350 COL4A1P02462 1669 aa9.58□□□□□ -0.88
PTCHD3P1-201ENST00000612350 TESPA1A2RU30 521 aaPredicted RBP9.58□□□□□ -0.88
PTCHD3P1-201ENST00000612350 MYL6BP14649 208 aa9.58□□□□□ -0.88
PTCHD3P1-201ENST00000612350 MAP3K11Q16584 847 aa9.58□□□□□ -0.88
PTCHD3P1-201ENST00000612350 AMER1Q5JTC6 1135 aaPredicted RBP9.58□□□□□ -0.88
PTCHD3P1-201ENST00000612350 IER5LQ5T953 404 aa9.58□□□□□ -0.88
PTCHD3P1-201ENST00000612350 CLMNQ96JQ2 1002 aa9.58□□□□□ -0.88
PTCHD3P1-201ENST00000612350 HTATIP2Q9BUP3 242 aa9.58□□□□□ -0.88
PTCHD3P1-201ENST00000612350 SCUBE2Q9NQ36 999 aa9.58□□□□□ -0.88
PTCHD3P1-201ENST00000612350 WNT10BO00744 389 aa9.57□□□□□ -0.88
PTCHD3P1-201ENST00000612350 GJA5P36382 358 aa9.57□□□□□ -0.88
PTCHD3P1-201ENST00000612350 VASPP50552 380 aaPredicted RBP9.57□□□□□ -0.88
PTCHD3P1-201ENST00000612350 ARHGEF6Q15052 776 aa9.57□□□□□ -0.88
PTCHD3P1-201ENST00000612350 MTFR1Q15390 333 aa9.57□□□□□ -0.88
PTCHD3P1-201ENST00000612350 OTUD7BQ6GQQ9 843 aa9.57□□□□□ -0.88
PTCHD3P1-201ENST00000612350 LRP10Q7Z4F1 713 aa9.57□□□□□ -0.88
PTCHD3P1-201ENST00000612350 ZC3H12CQ9C0D7 883 aaKnown RBP9.57□□□□□ -0.88
PTCHD3P1-201ENST00000612350 MIS18AQ9NYP9 233 aa9.57□□□□□ -0.88
PTCHD3P1-201ENST00000612350 TRIM35Q9UPQ4 493 aa9.57□□□□□ -0.88
PTCHD3P1-201ENST00000612350 COL3A1P02461 1466 aaPredicted RBP9.57□□□□□ -0.88
PTCHD3P1-201ENST00000612350 U2SURPO15042 1029 aaKnown RBP9.56□□□□□ -0.88
PTCHD3P1-201ENST00000612350 SEC24BO95487 1268 aa9.56□□□□□ -0.88
PTCHD3P1-201ENST00000612350 COL9A1P20849 921 aa9.56□□□□□ -0.88
PTCHD3P1-201ENST00000612350 BMP8BP34820 402 aa9.56□□□□□ -0.88
PTCHD3P1-201ENST00000612350 GJA8P48165 433 aa9.56□□□□□ -0.88
PTCHD3P1-201ENST00000612350 DCTN1Q14203 1278 aa9.56□□□□□ -0.88
PTCHD3P1-201ENST00000612350 TAF7Q15545 349 aaPredicted RBP9.56□□□□□ -0.88
PTCHD3P1-201ENST00000612350 NLRP10Q86W26 655 aa9.56□□□□□ -0.88
PTCHD3P1-201ENST00000612350 PODXL2Q9NZ53 605 aa9.56□□□□□ -0.88
PTCHD3P1-201ENST00000612350 KNSTRNQ9Y448 316 aa9.56□□□□□ -0.88
PTCHD3P1-201ENST00000612350 SH3TC1Q8TE82 1336 aa9.56□□□□□ -0.88
PTCHD3P1-201ENST00000612350 ZSWIM8A7E2V4 1837 aa9.55□□□□□ -0.88
PTCHD3P1-201ENST00000612350 ZEB1P37275 1124 aaPredicted RBP9.55□□□□□ -0.88
PTCHD3P1-201ENST00000612350 SF3B3Q15393 1217 aaKnown RBP9.55□□□□□ -0.88
PTCHD3P1-201ENST00000612350 NKX2-3Q8TAU0 364 aa9.55□□□□□ -0.88
PTCHD3P1-201ENST00000612350 GDF15Q99988 308 aa9.55□□□□□ -0.88
PTCHD3P1-201ENST00000612350 ARHGAP39Q9C0H5 1083 aa9.55□□□□□ -0.88
PTCHD3P1-201ENST00000612350 LAMA3Q16787 3333 aa9.54□□□□□ -0.88
PTCHD3P1-201ENST00000612350 UNCXA6NJT0 531 aa9.54□□□□□ -0.88
PTCHD3P1-201ENST00000612350 GJB1P08034 283 aa9.54□□□□□ -0.88
PTCHD3P1-201ENST00000612350 PRKAR2BP31323 418 aa9.54□□□□□ -0.88
PTCHD3P1-201ENST00000612350 EIF4A1P60842 406 aaKnown RBP9.54□□□□□ -0.88
PTCHD3P1-201ENST00000612350 PDIA6Q15084 440 aa9.54□□□□□ -0.88
PTCHD3P1-201ENST00000612350 LRIT3Q3SXY7 679 aa9.54□□□□□ -0.88
PTCHD3P1-201ENST00000612350 RTF1Q92541 710 aaKnown RBP9.54□□□□□ -0.88
PTCHD3P1-201ENST00000612350 MS4A4AQ96JQ5 239 aa9.54□□□□□ -0.88
PTCHD3P1-201ENST00000612350 THUMPD2Q9BTF0 503 aaKnown RBP9.54□□□□□ -0.88
PTCHD3P1-201ENST00000612350 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms