RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 MYO1BO43795 1136 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 SLC7A5Q01650 507 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 SAFB2Q14151 953 aaKnown RBP eCLIP8.33□□□□□ -1.08
TUBE1-207ENST00000604689 ALKBH2Q6NS38 261 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 IQCF2Q8IXL9 164 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 NEUROD4Q9HD90 331 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 SWAP70Q9UH65 585 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 EID1Q9Y6B2 187 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 CARMIL1Q5VZK9 1371 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 HECW2Q9P2P5 1572 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 DDX11L8A8MPP1 907 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 KINO60870 393 aaKnown RBP8.33□□□□□ -1.08
TUBE1-207ENST00000604689 DHX8Q14562 1220 aaKnown RBP8.33□□□□□ -1.08
TUBE1-207ENST00000604689 NUTM1Q86Y26 1132 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 TMCO5AQ8N6Q1 288 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 NGDNQ8NEJ9 315 aaKnown RBP8.33□□□□□ -1.08
TUBE1-207ENST00000604689 TRIM6Q9C030 488 aaPredicted RBP8.33□□□□□ -1.08
TUBE1-207ENST00000604689 MKS1Q9NXB0 559 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 DCTN4Q9UJW0 460 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 DNMT3AQ9Y6K1 912 aaPredicted RBP8.33□□□□□ -1.08
TUBE1-207ENST00000604689 TMEM131LA2VDJ0 1609 aa8.32□□□□□ -1.08
TUBE1-207ENST00000604689 PDGFRBP09619 1106 aa8.32□□□□□ -1.08
TUBE1-207ENST00000604689 GOLGA2Q08379 1002 aa8.32□□□□□ -1.08
TUBE1-207ENST00000604689 FXNQ16595 210 aa8.32□□□□□ -1.08
TUBE1-207ENST00000604689 NAIF1Q69YI7 327 aaPredicted RBP8.32□□□□□ -1.08
TUBE1-207ENST00000604689 WWC2Q6AWC2 1192 aa8.32□□□□□ -1.08
TUBE1-207ENST00000604689 TTLL5Q6EMB2 1281 aa8.32□□□□□ -1.08
TUBE1-207ENST00000604689 USP48Q86UV5 1035 aa8.32□□□□□ -1.08
TUBE1-207ENST00000604689 ZNF644Q9H582 1327 aaPredicted RBP8.32□□□□□ -1.08
TUBE1-207ENST00000604689 ADD2P35612 726 aa8.32□□□□□ -1.08
TUBE1-207ENST00000604689 PTK7Q13308 1070 aa8.32□□□□□ -1.08
TUBE1-207ENST00000604689 PPP2R5BQ15173 497 aa8.32□□□□□ -1.08
TUBE1-207ENST00000604689 SRPK1Q96SB4 655 aaKnown RBP8.32□□□□□ -1.08
TUBE1-207ENST00000604689 FEZ1Q99689 392 aa8.32□□□□□ -1.08
TUBE1-207ENST00000604689 EMILIN1Q9Y6C2 1016 aa8.32□□□□□ -1.08
TUBE1-207ENST00000604689 TTC37Q6PGP7 1564 aa8.32□□□□□ -1.08
TUBE1-207ENST00000604689 C2orf72A6NCS6 295 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 EXOC5O00471 708 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 HSD3B2P26439 372 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 TTC39BQ5VTQ0 682 aaPredicted RBP8.31□□□□□ -1.08
TUBE1-207ENST00000604689 NLRP13Q86W25 1043 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 ZNF579Q8NAF0 562 aaKnown RBP8.31□□□□□ -1.08
TUBE1-207ENST00000604689 C17orf50Q8WW18 174 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 GBP4Q96PP9 640 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 GJA3Q9Y6H8 435 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 TSPY2A6NKD2 308 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 FMNL1O95466 1100 aaPredicted RBP8.31□□□□□ -1.08
TUBE1-207ENST00000604689 TSPY3P0CV98 308 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 TSPY8P0CW00 308 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 SESN3P58005 492 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 TSPY1Q01534 308 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 TMC7Q7Z402 723 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 RNF214Q8ND24 703 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 TDRD7Q8NHU6 1098 aaKnown RBP8.31□□□□□ -1.08
TUBE1-207ENST00000604689 CERKQ8TCT0 537 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 TBC1D31Q96DN5 1066 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.31□□□□□ -1.084e-13■■□□□ 13.6
TUBE1-207ENST00000604689 CD248Q9HCU0 757 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 KIF15Q9NS87 1388 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 TRIM64CA6NLI5 447 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 RDXP35241 583 aaKnown RBP8.31□□□□□ -1.08
TUBE1-207ENST00000604689 JAMLQ86YT9 394 aa8.31□□□□□ -1.08
TUBE1-207ENST00000604689 CFAP69A5D8W1 941 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 ECM1Q16610 540 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 C21orf62-AS1Q17RA5 79 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 PADI6Q6TGC4 694 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 ZSCAN29Q8IWY8 852 aaPredicted RBP8.3□□□□□ -1.08
TUBE1-207ENST00000604689 PXYLP1Q8TE99 480 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 BICD1Q96G01 975 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 INO80BQ9C086 356 aaPredicted RBP8.3□□□□□ -1.08
TUBE1-207ENST00000604689 NACA2Q9H009 215 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 FANCLQ9NW38 375 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 JRKLQ9Y4A0 524 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 PIK3C2BO00750 1634 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 PLEKHH1Q9ULM0 1364 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 AGLP35573 1532 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 PPFIA2O75334 1257 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 GNL2Q13823 731 aaKnown RBP8.3□□□□□ -1.08
TUBE1-207ENST00000604689 UBE2Q1Q7Z7E8 422 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 SUGP1Q8IWZ8 645 aaKnown RBP8.3□□□□□ -1.08
TUBE1-207ENST00000604689 SMCR8Q8TEV9 937 aaPredicted RBP8.3□□□□□ -1.08
TUBE1-207ENST00000604689 FAM81BQ96LP2 452 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 PURBQ96QR8 312 aaKnown RBP8.3□□□□□ -1.08
TUBE1-207ENST00000604689 SPTLC1O15269 473 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 SORBS3O60504 671 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 ICMTO60725 284 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 HDGFL2Q7Z4V5 671 aaPredicted RBP8.3□□□□□ -1.08
TUBE1-207ENST00000604689 NAP1L4Q99733 375 aaKnown RBP8.3□□□□□ -1.08
TUBE1-207ENST00000604689 TGIF2Q9GZN2 237 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.3□□□□□ -1.08
TUBE1-207ENST00000604689 BRD4O60885 1362 aaPredicted RBP8.3□□□□□ -1.08
TUBE1-207ENST00000604689 USP54Q70EL1 1684 aa8.3□□□□□ -1.08
TUBE1-207ENST00000604689 F6X3S4 739 aa8.29□□□□□ -1.08
TUBE1-207ENST00000604689 EIF3JO75822 258 aaKnown RBP8.29□□□□□ -1.08
TUBE1-207ENST00000604689 HCLS1P14317 486 aaPredicted RBP8.29□□□□□ -1.08
TUBE1-207ENST00000604689 KIF11P52732 1056 aa8.29□□□□□ -1.08
TUBE1-207ENST00000604689 ZNF131P52739 623 aa8.29□□□□□ -1.08
TUBE1-207ENST00000604689 PIP4K2BP78356 416 aa8.29□□□□□ -1.08
TUBE1-207ENST00000604689 GRM1Q13255 1194 aa8.29□□□□□ -1.08
TUBE1-207ENST00000604689 SEZ6LQ9BYH1 1024 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms