RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 INTS8Q75QN2 995 aaKnown RBP9.85□□□□□ -0.83
CSMD1-216ENST00000602557 KCNH5Q8NCM2 988 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 VAT1LQ9HCJ6 419 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 SYKP43405 635 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 TRIM47Q96LD4 638 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 SMC6Q96SB8 1091 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 STK38LQ9Y2H1 464 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 IKBKGQ9Y6K9 419 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 SPATS2LQ9NUQ6 558 aaKnown RBP9.85□□□□□ -0.83
CSMD1-216ENST00000602557 PPM1FP49593 454 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-216ENST00000602557 NECAB1Q8N987 351 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 TBC1D31Q96DN5 1066 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 LRRC2Q9BYS8 371 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 PFDN1O60925 122 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 CFAP58Q5T655 872 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 MMRN2Q9H8L6 949 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 SAMM50Q9Y512 469 aa9.85□□□□□ -0.83
CSMD1-216ENST00000602557 TLDC2A0PJX2 215 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 UBA7P41226 1012 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 CCDC38Q502W7 563 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 PPFIBP2Q8ND30 876 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 EHMT1Q9H9B1 1298 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 MKRN1Q9UHC7 482 aaKnown RBP9.84□□□□□ -0.83
CSMD1-216ENST00000602557 RRP15Q9Y3B9 282 aaKnown RBP9.84□□□□□ -0.83
CSMD1-216ENST00000602557 CTTNBP2Q8WZ74 1663 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 AMOTQ4VCS5 1084 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 MAGI1Q96QZ7 1491 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-216ENST00000602557 TACC1O75410 805 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 BIRC2Q13490 618 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 PPP1R42Q7Z4L9 355 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 CAVIN2O95810 425 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 CCDC102BQ68D86 513 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 BAIAP2L1Q9UHR4 511 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 POGZQ7Z3K3 1410 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 DNM1Q05193 864 aaKnown RBP9.84□□□□□ -0.83
CSMD1-216ENST00000602557 LONRF3Q496Y0 759 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 UTP14CQ5TAP6 766 aaKnown RBP9.84□□□□□ -0.83
CSMD1-216ENST00000602557 CCDC25Q86WR0 208 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 CCDC170Q8IYT3 715 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 TTLL12Q14166 644 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-216ENST00000602557 DBN1Q16643 649 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 GBP7Q8N8V2 638 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-216ENST00000602557 IFT74Q96LB3 600 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 DBF4Q9UBU7 674 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-216ENST00000602557 ANAPC4Q9UJX5 808 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 IFT140Q96RY7 1462 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 CACNA2D3Q8IZS8 1091 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 PRC1O43663 620 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 AKR1B10O60218 316 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 IARSP41252 1262 aaKnown RBP9.84□□□□□ -0.83
CSMD1-216ENST00000602557 TTC16Q8NEE8 873 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 TMX3Q96JJ7 454 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 ZBTB3Q9H5J0 574 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 LOC102724159A0A0B4J2E5 919 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 PWP2Q15269 919 aaKnown RBP9.84□□□□□ -0.83
CSMD1-216ENST00000602557 HMG20BQ9P0W2 317 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 RABGAP1Q9Y3P9 1069 aa9.84□□□□□ -0.83
CSMD1-216ENST00000602557 SETDB1Q15047 1291 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 ATP5J2-PTCD1G3V325 749 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 AFMP43652 599 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 ABTB1Q969K4 478 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-216ENST00000602557 CARD6Q9BX69 1037 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 LRRC43Q8N309 656 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 RASAL2Q9UJF2 1139 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 NCOA1Q15788 1441 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 CCDC172P0C7W6 258 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 AMPD3Q01432 767 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 MBIPQ9NS73 344 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 ZNF219Q9P2Y4 722 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-216ENST00000602557 FAM83GA6ND36 823 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 TXNDC9O14530 226 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 TBCAO75347 108 aaKnown RBP9.83□□□□□ -0.84
CSMD1-216ENST00000602557 KRT13P13646 458 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 TTF1Q15361 905 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-216ENST00000602557 PIK3R4Q99570 1358 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 BICD1Q96G01 975 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 SYNCQ9H7C4 482 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 SLF2Q8IX21 1173 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 JARID2Q92833 1246 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-216ENST00000602557 GDAP1L1Q96MZ0 367 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 SESN3P58005 492 aa9.83□□□□□ -0.84
CSMD1-216ENST00000602557 TMEM110-MUSTN1A8MSY1 372 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 SEC24BO95487 1268 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 PDE4BQ07343 736 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 STMN4Q9H169 189 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-216ENST00000602557 KAT14Q9H8E8 782 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.82□□□□□ -0.84
CSMD1-216ENST00000602557 STAT6P42226 847 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 DACT1Q9NYF0 836 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 DISP3Q9P2K9 1392 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 ARHGAP25P42331 645 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 PSMC4P43686 418 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 NCOA7Q8NI08 942 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 TBC1D5Q92609 795 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 TTC21AQ8NDW8 1320 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 RRAGBQ5VZM2 374 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 VEZTQ9HBM0 779 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 CETN3O15182 167 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 SNCBQ16143 134 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 ZGPATQ8N5A5 531 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms