RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 FAM109BQ6ICB4 259 aaPredicted RBP6.06□□□□□ -1.44
HERC3-213ENST00000598772 CLEC4GQ6UXB4 293 aa6.06□□□□□ -1.44
HERC3-213ENST00000598772 AEBP1Q8IUX7 1158 aa6.06□□□□□ -1.44
HERC3-213ENST00000598772 ADAMTS19Q8TE59 1207 aa6.06□□□□□ -1.44
HERC3-213ENST00000598772 U2AF1L4Q8WU68 220 aaKnown RBP6.06□□□□□ -1.44
HERC3-213ENST00000598772 PAWRQ96IZ0 340 aaKnown RBP6.06□□□□□ -1.44
HERC3-213ENST00000598772 CRAMP1Q96RY5 1269 aa6.06□□□□□ -1.44
HERC3-213ENST00000598772 UHRF1Q96T88 793 aaPredicted RBP6.06□□□□□ -1.44
HERC3-213ENST00000598772 LRFN3Q9BTN0 628 aa6.06□□□□□ -1.44
HERC3-213ENST00000598772 SEMA6BQ9H3T3 888 aa6.06□□□□□ -1.44
HERC3-213ENST00000598772 RGL2O15211 777 aa6.05□□□□□ -1.44
HERC3-213ENST00000598772 RNMTO43148 476 aaKnown RBP6.05□□□□□ -1.44
HERC3-213ENST00000598772 GPTP24298 496 aa6.05□□□□□ -1.44
HERC3-213ENST00000598772 RPS12P25398 132 aaKnown RBP6.05□□□□□ -1.44
HERC3-213ENST00000598772 UBXN2AP68543 259 aa6.05□□□□□ -1.44
HERC3-213ENST00000598772 TAF1CQ15572 869 aaPredicted RBP6.05□□□□□ -1.44
HERC3-213ENST00000598772 WASHC4Q2M389 1173 aa6.05□□□□□ -1.44
HERC3-213ENST00000598772 UBE2Q1Q7Z7E8 422 aa6.05□□□□□ -1.44
HERC3-213ENST00000598772 ZNF496Q96IT1 587 aaPredicted RBP6.05□□□□□ -1.44
HERC3-213ENST00000598772 WNK4Q96J92 1243 aa6.05□□□□□ -1.44
HERC3-213ENST00000598772 CLMNQ96JQ2 1002 aa6.05□□□□□ -1.44
HERC3-213ENST00000598772 NYXQ9GZU5 481 aa6.05□□□□□ -1.44
HERC3-213ENST00000598772 ZFYVE28Q9HCC9 887 aa6.05□□□□□ -1.44
HERC3-213ENST00000598772 SNED1Q8TER0 1413 aa6.05□□□□□ -1.44
HERC3-213ENST00000598772 MUC3AQ02505 3323 aa6.05□□□□□ -1.44
HERC3-213ENST00000598772 KIF24Q5T7B8 1368 aa6.05□□□□□ -1.44
HERC3-213ENST00000598772 NCOR1O75376 2440 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 ECE2O60344 883 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 WDHD1O75717 1129 aaPredicted RBP6.04□□□□□ -1.44
HERC3-213ENST00000598772 FMNL1O95466 1100 aaPredicted RBP6.04□□□□□ -1.44
HERC3-213ENST00000598772 SGPL1O95470 568 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 GRK4P32298 578 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 HLFQ16534 295 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 CRY2Q49AN0 593 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 SULT6B1Q6IMI4 303 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 NECAB2Q7Z6G3 386 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 L3MBTL2Q969R5 705 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 TRIM47Q96LD4 638 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 DEFB118Q96PH6 123 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 CARD11Q9BXL7 1154 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 TMEM121BQ9BXQ6 578 aaPredicted RBP6.04□□□□□ -1.44
HERC3-213ENST00000598772 RTFDC1Q9BY42 306 aaPredicted RBP6.04□□□□□ -1.44
HERC3-213ENST00000598772 UNC93B1Q9H1C4 597 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 RIPOR2Q9Y4F9 1068 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 ABCC12Q96J65 1359 aa6.04□□□□□ -1.44
HERC3-213ENST00000598772 NCAPD2Q15021 1401 aa6.03□□□□□ -1.44
HERC3-213ENST00000598772 NBPF26B4DH59 902 aa6.03□□□□□ -1.44
HERC3-213ENST00000598772 NBPF9Q3BBW0 867 aa6.03□□□□□ -1.44
HERC3-213ENST00000598772 TMEM31Q5JXX7 168 aa6.03□□□□□ -1.44
HERC3-213ENST00000598772 C3orf67Q6ZVT6 689 aa6.03□□□□□ -1.44
HERC3-213ENST00000598772 SP8Q8IXZ3 490 aa6.03□□□□□ -1.44
HERC3-213ENST00000598772 USP38Q8NB14 1042 aa6.03□□□□□ -1.44
HERC3-213ENST00000598772 NLRP3Q96P20 1036 aa6.03□□□□□ -1.44
HERC3-213ENST00000598772 NECAB3Q96P71 396 aaPredicted RBP6.03□□□□□ -1.44
HERC3-213ENST00000598772 PTPN18Q99952 460 aa6.03□□□□□ -1.44
HERC3-213ENST00000598772 MYOZ2Q9NPC6 264 aa6.03□□□□□ -1.44
HERC3-213ENST00000598772 POLKQ9UBT6 870 aa6.03□□□□□ -1.44
HERC3-213ENST00000598772 NSFL1CQ9UNZ2 370 aaKnown RBP6.03□□□□□ -1.44
HERC3-213ENST00000598772 ARIH1Q9Y4X5 557 aaPredicted RBP6.03□□□□□ -1.44
HERC3-213ENST00000598772 FAM86C2PA6NEL3 165 aa6.02□□□□□ -1.45
HERC3-213ENST00000598772 BBOX1O75936 387 aa6.02□□□□□ -1.45
HERC3-213ENST00000598772 ZBTB48P10074 688 aaPredicted RBP6.02□□□□□ -1.45
HERC3-213ENST00000598772 HOXD10P28358 340 aa6.02□□□□□ -1.45
HERC3-213ENST00000598772 PSMC4P43686 418 aa6.02□□□□□ -1.45
HERC3-213ENST00000598772 LDLRAD1Q5T700 205 aa6.02□□□□□ -1.45
HERC3-213ENST00000598772 PODNQ7Z5L7 613 aa6.02□□□□□ -1.45
HERC3-213ENST00000598772 DIS3LQ8TF46 1054 aaKnown RBP6.02□□□□□ -1.45
HERC3-213ENST00000598772 FBXW7Q969H0 707 aa6.02□□□□□ -1.45
HERC3-213ENST00000598772 UIMC1Q96RL1 719 aa6.02□□□□□ -1.45
HERC3-213ENST00000598772 EPHX3Q9H6B9 360 aa6.02□□□□□ -1.45
HERC3-213ENST00000598772 TAOK2Q9UL54 1235 aa6.02□□□□□ -1.45
HERC3-213ENST00000598772 ABCC4O15439 1325 aa6.01□□□□□ -1.45
HERC3-213ENST00000598772 KIF7Q2M1P5 1343 aa6.01□□□□□ -1.45
HERC3-213ENST00000598772 PPP1R12BO60237 982 aaPredicted RBP6.01□□□□□ -1.45
HERC3-213ENST00000598772 USP17L8P0C7I0 530 aa6.01□□□□□ -1.45
HERC3-213ENST00000598772 PRMT2P55345 433 aa6.01□□□□□ -1.45
HERC3-213ENST00000598772 LACTBP83111 547 aaPredicted RBP6.01□□□□□ -1.45
HERC3-213ENST00000598772 TEFQ10587 303 aa6.01□□□□□ -1.45
HERC3-213ENST00000598772 CCDC85BQ15834 202 aaPredicted RBP6.01□□□□□ -1.45
HERC3-213ENST00000598772 DDX46Q7L014 1031 aaKnown RBP6.01□□□□□ -1.45
HERC3-213ENST00000598772 FMNL2Q96PY5 1086 aa6.01□□□□□ -1.45
HERC3-213ENST00000598772 ASB2Q96Q27 587 aa6.01□□□□□ -1.45
HERC3-213ENST00000598772 LBHD1Q9BQE6 289 aaPredicted RBP6.01□□□□□ -1.45
HERC3-213ENST00000598772 USP16Q9Y5T5 823 aa6.01□□□□□ -1.45
HERC3-213ENST00000598772 HEG1Q9ULI3 1381 aa6.01□□□□□ -1.45
HERC3-213ENST00000598772 CCL15-CCL14A0A0B4J2E2 113 aa6□□□□□ -1.45
HERC3-213ENST00000598772 VIL1P09327 827 aaKnown RBP6□□□□□ -1.45
HERC3-213ENST00000598772 GJA5P36382 358 aa6□□□□□ -1.45
HERC3-213ENST00000598772 MRPS5P82675 430 aaKnown RBP6□□□□□ -1.45
HERC3-213ENST00000598772 NEUROD1Q13562 356 aa6□□□□□ -1.45
HERC3-213ENST00000598772 CCL15Q16663 113 aa6□□□□□ -1.45
HERC3-213ENST00000598772 SUSD4Q5VX71 490 aa6□□□□□ -1.45
HERC3-213ENST00000598772 ZNF790Q6PG37 636 aa6□□□□□ -1.45
HERC3-213ENST00000598772 ATXN2LQ8WWM7 1075 aaKnown RBP6□□□□□ -1.45
HERC3-213ENST00000598772 ZC3H12CQ9C0D7 883 aaKnown RBP6□□□□□ -1.45
HERC3-213ENST00000598772 ELP3Q9H9T3 547 aa6□□□□□ -1.45
HERC3-213ENST00000598772 SRRDQ9UH36 339 aa6□□□□□ -1.45
HERC3-213ENST00000598772 RTL9Q8NET4 1388 aa6□□□□□ -1.45
HERC3-213ENST00000598772 SCN7AQ01118 1682 aa6□□□□□ -1.45
HERC3-213ENST00000598772 MYPNQ86TC9 1320 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms