RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 USP17L3A6NCW0 530 aa17.17■□□□□ 0.34
IRF3-218ENST00000597369 USP17L4A6NCW7 530 aa17.17■□□□□ 0.34
IRF3-218ENST00000597369 ZBTB7BO15156 539 aaPredicted RBP17.17■□□□□ 0.34
IRF3-218ENST00000597369 MMP14P50281 582 aa17.17■□□□□ 0.34
IRF3-218ENST00000597369 USP17L1Q7RTZ2 530 aa17.17■□□□□ 0.34
IRF3-218ENST00000597369 PODNQ7Z5L7 613 aa17.17■□□□□ 0.34
IRF3-218ENST00000597369 UBE2Q1Q7Z7E8 422 aa17.17■□□□□ 0.34
IRF3-218ENST00000597369 SHISA4Q96DD7 197 aa17.17■□□□□ 0.34
IRF3-218ENST00000597369 RPS8P62241 208 aaKnown RBP17.16■□□□□ 0.34
IRF3-218ENST00000597369 PDIA6Q15084 440 aa17.16■□□□□ 0.34
IRF3-218ENST00000597369 PTPN18Q99952 460 aa17.16■□□□□ 0.34
IRF3-218ENST00000597369 COL4A1P02462 1669 aa17.16■□□□□ 0.34
IRF3-218ENST00000597369 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
IRF3-218ENST00000597369 EIF4G2P78344 907 aaKnown RBP eCLIP17.15■□□□□ 0.34
IRF3-218ENST00000597369 APOBEC3FQ8IUX4 373 aaKnown RBP17.15■□□□□ 0.34
IRF3-218ENST00000597369 OGFOD1Q8N543 542 aa17.15■□□□□ 0.34
IRF3-218ENST00000597369 NKX2-3Q8TAU0 364 aa17.15■□□□□ 0.34
IRF3-218ENST00000597369 UFL1O94874 794 aa17.14■□□□□ 0.33
IRF3-218ENST00000597369 MYCP01106 439 aaPredicted RBP17.14■□□□□ 0.33
IRF3-218ENST00000597369 SH3TC2Q8TF17 1288 aa17.14■□□□□ 0.33
IRF3-218ENST00000597369 CLMNQ96JQ2 1002 aa17.14■□□□□ 0.33
IRF3-218ENST00000597369 THUMPD2Q9BTF0 503 aaKnown RBP17.14■□□□□ 0.33
IRF3-218ENST00000597369 GGA1Q9UJY5 639 aa17.14■□□□□ 0.33
IRF3-218ENST00000597369 COL1A1P02452 1464 aaPredicted RBP17.13■□□□□ 0.33
IRF3-218ENST00000597369 DEFB123Q8N688 67 aa17.13■□□□□ 0.33
IRF3-218ENST00000597369 PPP1R12BO60237 982 aaPredicted RBP17.12■□□□□ 0.33
IRF3-218ENST00000597369 HSPA5P11021 654 aaKnown RBP17.12■□□□□ 0.33
IRF3-218ENST00000597369 PRDM6Q9NQX0 595 aa17.12■□□□□ 0.33
IRF3-218ENST00000597369 ANKIB1Q9P2G1 1089 aa17.12■□□□□ 0.33
IRF3-218ENST00000597369 FZD1Q9UP38 647 aa17.12■□□□□ 0.33
IRF3-218ENST00000597369 MUC3AQ02505 3323 aa17.11■□□□□ 0.33
IRF3-218ENST00000597369 GNRH1P01148 92 aa17.11■□□□□ 0.33
IRF3-218ENST00000597369 CC2D1BQ5T0F9 858 aaKnown RBP17.11■□□□□ 0.33
IRF3-218ENST00000597369 MYO3BQ8WXR4 1341 aa17.11■□□□□ 0.33
IRF3-218ENST00000597369 DLG5Q8TDM6 1919 aa17.1■□□□□ 0.33
IRF3-218ENST00000597369 GJA5P36382 358 aa17.1■□□□□ 0.33
IRF3-218ENST00000597369 GJA8P48165 433 aa17.1■□□□□ 0.33
IRF3-218ENST00000597369 PRMT2P55345 433 aa17.1■□□□□ 0.33
IRF3-218ENST00000597369 DACT2Q5SW24 774 aa17.1■□□□□ 0.33
IRF3-218ENST00000597369 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.1■□□□□ 0.33
IRF3-218ENST00000597369 ZBED3Q96IU2 234 aaPredicted RBP17.1■□□□□ 0.33
IRF3-218ENST00000597369 ZFYVE28Q9HCC9 887 aa17.1■□□□□ 0.33
IRF3-218ENST00000597369 MTMR10Q9NXD2 777 aa17.1■□□□□ 0.33
IRF3-218ENST00000597369 MTFR1Q15390 333 aa17.09■□□□□ 0.33
IRF3-218ENST00000597369 PROSER3Q2NL68 480 aa17.09■□□□□ 0.33
IRF3-218ENST00000597369 COPS6Q7L5N1 327 aa17.09■□□□□ 0.33
IRF3-218ENST00000597369 DEFB129Q9H1M3 183 aa17.09■□□□□ 0.33
IRF3-218ENST00000597369 TTC28Q96AY4 2481 aa17.09■□□□□ 0.33
IRF3-218ENST00000597369 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.32
IRF3-218ENST00000597369 SASH1O94885 1247 aa17.08■□□□□ 0.32
IRF3-218ENST00000597369 GJB1P08034 283 aa17.08■□□□□ 0.32
IRF3-218ENST00000597369 BMP8BP34820 402 aa17.08■□□□□ 0.32
IRF3-218ENST00000597369 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
IRF3-218ENST00000597369 MS4A4AQ96JQ5 239 aa17.08■□□□□ 0.32
IRF3-218ENST00000597369 STAP2Q9UGK3 403 aa17.08■□□□□ 0.32
IRF3-218ENST00000597369 NUDCQ9Y266 331 aa17.08■□□□□ 0.32
IRF3-218ENST00000597369 SSC5DA1L4H1 1573 aa17.07■□□□□ 0.32
IRF3-218ENST00000597369 STRIP1Q5VSL9 837 aa17.07■□□□□ 0.32
IRF3-218ENST00000597369 PPP2R3BQ9Y5P8 575 aa17.07■□□□□ 0.32
IRF3-218ENST00000597369 EYSQ5T1H1 3165 aa17.06■□□□□ 0.32
IRF3-218ENST00000597369 ZSWIM8A7E2V4 1837 aa17.06■□□□□ 0.32
IRF3-218ENST00000597369 ECM29Q5VYK3 1845 aa17.06■□□□□ 0.32
IRF3-218ENST00000597369 ANXA1P04083 346 aa17.06■□□□□ 0.32
IRF3-218ENST00000597369 TAF1CQ15572 869 aaPredicted RBP17.06■□□□□ 0.32
IRF3-218ENST00000597369 LRIT3Q3SXY7 679 aa17.06■□□□□ 0.32
IRF3-218ENST00000597369 Q7L0L9 218 aa17.06■□□□□ 0.32
IRF3-218ENST00000597369 ANKRD13AQ8IZ07 590 aa17.06■□□□□ 0.32
IRF3-218ENST00000597369 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.06■□□□□ 0.32
IRF3-218ENST00000597369 XDHP47989 1333 aa17.05■□□□□ 0.32
IRF3-218ENST00000597369 EVI5O60447 810 aa17.05■□□□□ 0.32
IRF3-218ENST00000597369 U2AF1L5P0DN76 240 aaPredicted RBP17.05■□□□□ 0.32
IRF3-218ENST00000597369 EIF2S2P20042 333 aaKnown RBP17.05■□□□□ 0.32
IRF3-218ENST00000597369 IREB2P48200 963 aaKnown RBP17.05■□□□□ 0.32
IRF3-218ENST00000597369 LACTBP83111 547 aaPredicted RBP17.05■□□□□ 0.32
IRF3-218ENST00000597369 U2AF1Q01081 240 aaKnown RBP eCLIP17.05■□□□□ 0.32
IRF3-218ENST00000597369 AIMP1Q12904 312 aaKnown RBP17.05■□□□□ 0.32
IRF3-218ENST00000597369 KIF22Q14807 665 aa17.05■□□□□ 0.32
IRF3-218ENST00000597369 SUPT20HL1Q3ZLR7 823 aa17.05■□□□□ 0.32
IRF3-218ENST00000597369 XAGE3Q8WTP9 111 aa17.05■□□□□ 0.32
IRF3-218ENST00000597369 CFAP53Q96M91 514 aa17.05■□□□□ 0.32
IRF3-218ENST00000597369 MXD3Q9BW11 206 aa17.05■□□□□ 0.32
IRF3-218ENST00000597369 USP2O75604 605 aaPredicted RBP17.04■□□□□ 0.32
IRF3-218ENST00000597369 ATP2B4P23634 1241 aa17.04■□□□□ 0.32
IRF3-218ENST00000597369 GDF15Q99988 308 aa17.04■□□□□ 0.32
IRF3-218ENST00000597369 ISCA1Q9BUE6 129 aa17.04■□□□□ 0.32
IRF3-218ENST00000597369 ARHGAP39Q9C0H5 1083 aa17.04■□□□□ 0.32
IRF3-218ENST00000597369 TLR2O60603 784 aa17.03■□□□□ 0.32
IRF3-218ENST00000597369 CAPN2P17655 700 aa17.03■□□□□ 0.32
IRF3-218ENST00000597369 BRI3BPQ8WY22 251 aa17.03■□□□□ 0.32
IRF3-218ENST00000597369 SEC31BQ9NQW1 1179 aa17.03■□□□□ 0.32
IRF3-218ENST00000597369 PRUNE2Q8WUY3 3088 aa17.02■□□□□ 0.32
IRF3-218ENST00000597369 IRS4O14654 1257 aaPredicted RBP17.02■□□□□ 0.32
IRF3-218ENST00000597369 OPTNQ96CV9 577 aa17.02■□□□□ 0.32
IRF3-218ENST00000597369 LAMA2P24043 3122 aaKnown RBP17.02■□□□□ 0.31
IRF3-218ENST00000597369 OTOFQ9HC10 1997 aa17.02■□□□□ 0.31
IRF3-218ENST00000597369 ALPK3Q96L96 1907 aa17.02■□□□□ 0.31
IRF3-218ENST00000597369 MED23Q9ULK4 1368 aa17.02■□□□□ 0.31
IRF3-218ENST00000597369 WDHD1O75717 1129 aaPredicted RBP17.01■□□□□ 0.31
IRF3-218ENST00000597369 FARP2O94887 1054 aaPredicted RBP17.01■□□□□ 0.31
IRF3-218ENST00000597369 CCL5P13501 91 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms