RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 BRD8Q9H0E9 1235 aa8.47□□□□□ -1.05
LINC00347-202ENST00000594461 RSPH9Q9H1X1 276 aaPredicted RBP8.47□□□□□ -1.05
LINC00347-202ENST00000594461 RTEL1Q9NZ71 1219 aa8.47□□□□□ -1.05
LINC00347-202ENST00000594461 MIA2Q96PC5 1412 aa8.46□□□□□ -1.05
LINC00347-202ENST00000594461 FRMD3A2A2Y4 597 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 M0R2C6 588 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 ROR2Q01974 943 aaKnown RBP8.46□□□□□ -1.06
LINC00347-202ENST00000594461 SLC4A8Q2Y0W8 1093 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 SMYD1Q8NB12 490 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 VPS37AQ8NEZ2 397 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 ERMNQ8TAM6 284 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 RSRC1Q96IZ7 334 aaKnown RBP8.46□□□□□ -1.06
LINC00347-202ENST00000594461 ALS2CR12Q96Q35 445 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.46□□□□□ -1.06
LINC00347-202ENST00000594461 EXOC1Q9NV70 894 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 PTPRGP23470 1445 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 SENP3-EIF4A1A0A087X0R7 540 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 BOLA2-SMG1P6H3BVE0 249 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 PABPC4Q13310 644 aaKnown RBP eCLIP8.46□□□□□ -1.06
LINC00347-202ENST00000594461 CLPPQ16740 277 aaPredicted RBP8.46□□□□□ -1.06
LINC00347-202ENST00000594461 DUSP27Q5VZP5 1158 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 CYB5RLQ6IPT4 315 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 DZIP1Q86YF9 867 aaKnown RBP8.46□□□□□ -1.06
LINC00347-202ENST00000594461 CLASRPQ8N2M8 674 aaKnown RBP8.46□□□□□ -1.06
LINC00347-202ENST00000594461 SLC43A3Q8NBI5 491 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 CUL5Q93034 780 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 JAKMIP2Q96AA8 810 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 CORO1BQ9BR76 489 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 CD248Q9HCU0 757 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 HOXC10Q9NYD6 342 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 PCDHGC5Q9Y5F6 944 aa8.46□□□□□ -1.06
LINC00347-202ENST00000594461 ELP1O95163 1332 aa8.45□□□□□ -1.06
LINC00347-202ENST00000594461 CEP104O60308 925 aa8.45□□□□□ -1.06
LINC00347-202ENST00000594461 SLC4A2P04920 1241 aa8.45□□□□□ -1.06
LINC00347-202ENST00000594461 HDAC4P56524 1084 aa8.45□□□□□ -1.06
LINC00347-202ENST00000594461 TLDC1Q6P9B6 456 aa8.45□□□□□ -1.06
LINC00347-202ENST00000594461 RPAP2Q8IXW5 612 aaPredicted RBP8.45□□□□□ -1.06
LINC00347-202ENST00000594461 FAM76AQ8TAV0 307 aa8.45□□□□□ -1.06
LINC00347-202ENST00000594461 SLC7A5P2Q9GIP4 190 aa8.45□□□□□ -1.06
LINC00347-202ENST00000594461 GINM1Q9NU53 330 aa8.45□□□□□ -1.06
LINC00347-202ENST00000594461 IFT57Q9NWB7 429 aa8.45□□□□□ -1.06
LINC00347-202ENST00000594461 ZNF510Q9Y2H8 683 aa8.45□□□□□ -1.06
LINC00347-202ENST00000594461 NCOA1Q15788 1441 aa8.45□□□□□ -1.06
LINC00347-202ENST00000594461 TRIM64CA6NLI5 447 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 ZEB2O60315 1214 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 PRPF40AO75400 957 aaKnown RBP8.44□□□□□ -1.06
LINC00347-202ENST00000594461 RNF8O76064 485 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 TGFB3P10600 412 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 TRIM21P19474 475 aaKnown RBP8.44□□□□□ -1.06
LINC00347-202ENST00000594461 YY1P25490 414 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 PAPOLAP51003 745 aaKnown RBP8.44□□□□□ -1.06
LINC00347-202ENST00000594461 MAP3K9P80192 1104 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 TAF7Q15545 349 aaPredicted RBP8.44□□□□□ -1.06
LINC00347-202ENST00000594461 HOOK3Q86VS8 718 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 PEX5LQ8IYB4 626 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 RNF168Q8IYW5 571 aaPredicted RBP8.44□□□□□ -1.06
LINC00347-202ENST00000594461 CCDC150Q8NCX0 1101 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 SPIRE2Q8WWL2 714 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 DTNBP1Q96EV8 351 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 ACBD3Q9H3P7 528 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 CASTP20810 708 aaKnown RBP8.44□□□□□ -1.06
LINC00347-202ENST00000594461 ZNF132P52740 706 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 TPD52L1Q16890 204 aaPredicted RBP8.44□□□□□ -1.06
LINC00347-202ENST00000594461 CEP57L1Q8IYX8 460 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 CENPOQ9BU64 300 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 LRRC27Q9C0I9 530 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 DIS3Q9Y2L1 958 aaKnown RBP8.44□□□□□ -1.06
LINC00347-202ENST00000594461 SHROOM2Q13796 1616 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 LRRIQ1Q96JM4 1722 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 EVC2Q86UK5 1308 aa8.44□□□□□ -1.06
LINC00347-202ENST00000594461 FMN1Q68DA7 1419 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 SETD5Q9C0A6 1442 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 BICDL2A1A5D9 508 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 WDHD1O75717 1129 aaPredicted RBP8.43□□□□□ -1.06
LINC00347-202ENST00000594461 TRIM37O94972 964 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 FOSL1P15407 271 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 EIF4G2P78344 907 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC00347-202ENST00000594461 PDE4BQ07343 736 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 ERCC6LQ2NKX8 1250 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 SMUG1Q53HV7 270 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 CAPRIN2Q6IMN6 1127 aaKnown RBP8.43□□□□□ -1.06
LINC00347-202ENST00000594461 MTHFD1LQ6UB35 978 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 TTLL7Q6ZT98 887 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 SLF2Q8IX21 1173 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 C1orf131Q8NDD1 294 aaKnown RBP8.43□□□□□ -1.06
LINC00347-202ENST00000594461 GORASP1Q9BQQ3 440 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 SLC39A3Q9BRY0 314 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 ATP6V0A4Q9HBG4 840 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 TRMT1Q9NXH9 659 aaKnown RBP8.43□□□□□ -1.06
LINC00347-202ENST00000594461 MBD4O95243 580 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 EZRP15311 586 aaKnown RBP8.43□□□□□ -1.06
LINC00347-202ENST00000594461 ENPP1P22413 925 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 MYBPC3Q14896 1274 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 ZNF662Q6ZS27 426 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 FNBP4Q8N3X1 1017 aaPredicted RBP8.43□□□□□ -1.06
LINC00347-202ENST00000594461 USP33Q8TEY7 942 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 DDX12PQ92771 950 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 PMM1Q92871 262 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 TMX3Q96JJ7 454 aa8.43□□□□□ -1.06
LINC00347-202ENST00000594461 SPOCK3Q9BQ16 436 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms