RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 EIF5BO60841 1220 aaKnown RBP16■□□□□ 0.15
VRK3-205ENST00000593919 SLC51AQ86UW1 340 aa16■□□□□ 0.15
VRK3-205ENST00000593919 RBM17Q96I25 401 aaKnown RBP16■□□□□ 0.15
VRK3-205ENST00000593919 PAG1Q9NWQ8 432 aa16■□□□□ 0.15
VRK3-205ENST00000593919 GOLIM4O00461 696 aa15.99■□□□□ 0.15
VRK3-205ENST00000593919 REC8O95072 547 aa15.99■□□□□ 0.15
VRK3-205ENST00000593919 HOXA10P31260 410 aaPredicted RBP15.99■□□□□ 0.15
VRK3-205ENST00000593919 MCAMP43121 646 aa15.99■□□□□ 0.15
VRK3-205ENST00000593919 ZNF512BQ96KM6 892 aaPredicted RBP15.99■□□□□ 0.15
VRK3-205ENST00000593919 DIAPH3Q9NSV4 1193 aa15.99■□□□□ 0.15
VRK3-205ENST00000593919 MYH13Q9UKX3 1938 aa15.99■□□□□ 0.15
VRK3-205ENST00000593919 ARID4AP29374 1257 aaPredicted RBP15.98■□□□□ 0.15
VRK3-205ENST00000593919 FKBP4Q02790 459 aaKnown RBP eCLIP15.98■□□□□ 0.15
VRK3-205ENST00000593919 UBE4AQ14139 1066 aa15.98■□□□□ 0.15
VRK3-205ENST00000593919 CWC27Q6UX04 472 aaKnown RBP15.98■□□□□ 0.15
VRK3-205ENST00000593919 PI16Q6UXB8 463 aa15.98■□□□□ 0.15
VRK3-205ENST00000593919 SNRKQ9NRH2 765 aa15.98■□□□□ 0.15
VRK3-205ENST00000593919 LRRC37AA6NMS7 1700 aa15.98■□□□□ 0.15
VRK3-205ENST00000593919 KBTBD3Q8NAB2 608 aa15.98■□□□□ 0.15
VRK3-205ENST00000593919 ANKRD2Q9GZV1 360 aa15.98■□□□□ 0.15
VRK3-205ENST00000593919 HIP1O00291 1037 aa15.97■□□□□ 0.15
VRK3-205ENST00000593919 SGSM2O43147 1006 aa15.97■□□□□ 0.15
VRK3-205ENST00000593919 SRGNP10124 158 aa15.97■□□□□ 0.15
VRK3-205ENST00000593919 PDE6BP35913 854 aa15.97■□□□□ 0.15
VRK3-205ENST00000593919 RBM25P49756 843 aaKnown RBP15.97■□□□□ 0.15
VRK3-205ENST00000593919 CRAMP1Q96RY5 1269 aa15.97■□□□□ 0.15
VRK3-205ENST00000593919 USP26Q9BXU7 913 aa15.97■□□□□ 0.15
VRK3-205ENST00000593919 ANTXR1Q9H6X2 564 aa15.97■□□□□ 0.15
VRK3-205ENST00000593919 RFX7Q2KHR2 1363 aa15.97■□□□□ 0.15
VRK3-205ENST00000593919 NPM3O75607 178 aaKnown RBP15.96■□□□□ 0.15
VRK3-205ENST00000593919 ZAP70P43403 619 aa15.96■□□□□ 0.15
VRK3-205ENST00000593919 BCAMP50895 628 aa15.96■□□□□ 0.15
VRK3-205ENST00000593919 SPRYD3Q8NCJ5 442 aa15.96■□□□□ 0.15
VRK3-205ENST00000593919 UPF1Q92900 1129 aaKnown RBP eCLIP15.96■□□□□ 0.15
VRK3-205ENST00000593919 FAM227BQ96M60 508 aa15.96■□□□□ 0.15
VRK3-205ENST00000593919 UQCRFS1P1P0C7P4 283 aa15.96■□□□□ 0.15
VRK3-205ENST00000593919 RUFY2Q8WXA3 655 aa15.96■□□□□ 0.15
VRK3-205ENST00000593919 ANO2Q9NQ90 1003 aa15.96■□□□□ 0.15
VRK3-205ENST00000593919 DOCK2Q92608 1830 aa15.95■□□□□ 0.14
VRK3-205ENST00000593919 NPR1P16066 1061 aa15.95■□□□□ 0.14
VRK3-205ENST00000593919 KCNJ4P48050 445 aa15.95■□□□□ 0.14
VRK3-205ENST00000593919 NMIQ13287 307 aaPredicted RBP15.95■□□□□ 0.14
VRK3-205ENST00000593919 RASGRF1Q13972 1273 aa15.95■□□□□ 0.14
VRK3-205ENST00000593919 SLC16A10Q8TF71 515 aa15.95■□□□□ 0.14
VRK3-205ENST00000593919 ANKIB1Q9P2G1 1089 aa15.95■□□□□ 0.14
VRK3-205ENST00000593919 ZNF804BA4D1E1 1349 aa15.95■□□□□ 0.14
VRK3-205ENST00000593919 A0A0D9SFI3 127 aa15.95■□□□□ 0.14
VRK3-205ENST00000593919 FRAT2O75474 233 aaPredicted RBP15.95■□□□□ 0.14
VRK3-205ENST00000593919 BBOX1O75936 387 aa15.95■□□□□ 0.14
VRK3-205ENST00000593919 CHGBP05060 677 aa15.95■□□□□ 0.14
VRK3-205ENST00000593919 KLRK1P26718 216 aa15.95■□□□□ 0.14
VRK3-205ENST00000593919 LTBP1Q14766 1721 aa15.94■□□□□ 0.14
VRK3-205ENST00000593919 XDHP47989 1333 aa15.94■□□□□ 0.14
VRK3-205ENST00000593919 GYG1P46976 350 aa15.94■□□□□ 0.14
VRK3-205ENST00000593919 HSCBQ8IWL3 235 aa15.94■□□□□ 0.14
VRK3-205ENST00000593919 HMG20BQ9P0W2 317 aa15.94■□□□□ 0.14
VRK3-205ENST00000593919 CYP2E1P05181 493 aaPredicted RBP15.93■□□□□ 0.14
VRK3-205ENST00000593919 SPATA5Q8NB90 893 aa15.93■□□□□ 0.14
VRK3-205ENST00000593919 RAD50Q92878 1312 aa15.93■□□□□ 0.14
VRK3-205ENST00000593919 PPEF1O14829 653 aaPredicted RBP15.93■□□□□ 0.14
VRK3-205ENST00000593919 CAVIN4Q5BKX8 364 aa15.93■□□□□ 0.14
VRK3-205ENST00000593919 MASTLQ96GX5 879 aa15.93■□□□□ 0.14
VRK3-205ENST00000593919 FAM84BQ96KN1 310 aaPredicted RBP15.93■□□□□ 0.14
VRK3-205ENST00000593919 MED23Q9ULK4 1368 aa15.92■□□□□ 0.14
VRK3-205ENST00000593919 GPSM2P81274 684 aa15.92■□□□□ 0.14
VRK3-205ENST00000593919 TMEM132AQ24JP5 1023 aa15.92■□□□□ 0.14
VRK3-205ENST00000593919 TICAM2Q86XR7 235 aa15.92■□□□□ 0.14
VRK3-205ENST00000593919 IQSEC3Q9UPP2 1182 aaPredicted RBP15.92■□□□□ 0.14
VRK3-205ENST00000593919 LEMD3Q9Y2U8 911 aa15.92■□□□□ 0.14
VRK3-205ENST00000593919 SLX4Q8IY92 1834 aa15.92■□□□□ 0.14
VRK3-205ENST00000593919 IRS2Q9Y4H2 1338 aa15.92■□□□□ 0.14
VRK3-205ENST00000593919 DLEC1Q9Y238 1755 aa15.91■□□□□ 0.14
VRK3-205ENST00000593919 ALDH1B1P30837 517 aa15.91■□□□□ 0.14
VRK3-205ENST00000593919 SLFNL1Q499Z3 407 aa15.91■□□□□ 0.14
VRK3-205ENST00000593919 C10orf71Q711Q0 1435 aa15.91■□□□□ 0.14
VRK3-205ENST00000593919 TMC4Q7Z404 712 aa15.91■□□□□ 0.14
VRK3-205ENST00000593919 VPS37DQ86XT2 251 aa15.91■□□□□ 0.14
VRK3-205ENST00000593919 C2CD5Q86YS7 1000 aa15.91■□□□□ 0.14
VRK3-205ENST00000593919 KIF2CQ99661 725 aa15.91■□□□□ 0.14
VRK3-205ENST00000593919 LSG1Q9H089 658 aaKnown RBP15.91■□□□□ 0.14
VRK3-205ENST00000593919 NSFL1CQ9UNZ2 370 aaKnown RBP15.91■□□□□ 0.14
VRK3-205ENST00000593919 KIF13BQ9NQT8 1826 aa15.91■□□□□ 0.14
VRK3-205ENST00000593919 COL1A1P02452 1464 aaPredicted RBP15.91■□□□□ 0.14
VRK3-205ENST00000593919 TTF1Q15361 905 aaPredicted RBP15.91■□□□□ 0.14
VRK3-205ENST00000593919 FBXO33Q7Z6M2 555 aa15.91■□□□□ 0.14
VRK3-205ENST00000593919 ZNF589Q86UQ0 364 aaPredicted RBP15.91■□□□□ 0.14
VRK3-205ENST00000593919 TXNRD3Q86VQ6 643 aa15.91■□□□□ 0.14
VRK3-205ENST00000593919 ZNF622Q969S3 477 aaKnown RBP eCLIP15.91■□□□□ 0.14
VRK3-205ENST00000593919 GNL3LQ9NVN8 582 aaKnown RBP15.91■□□□□ 0.14
VRK3-205ENST00000593919 H0YIN7 160 aa15.9■□□□□ 0.14
VRK3-205ENST00000593919 ZBTB7AO95365 584 aa15.9■□□□□ 0.14
VRK3-205ENST00000593919 KIAA1211Q6ZU35 1233 aa15.9■□□□□ 0.14
VRK3-205ENST00000593919 SP8Q8IXZ3 490 aa15.9■□□□□ 0.14
VRK3-205ENST00000593919 SEC62Q99442 399 aaKnown RBP15.9■□□□□ 0.14
VRK3-205ENST00000593919 PIH1D3Q9NQM4 214 aaKnown RBP15.9■□□□□ 0.14
VRK3-205ENST00000593919 ATP6V0A2Q9Y487 856 aa15.9■□□□□ 0.14
VRK3-205ENST00000593919 RNF113AO15541 343 aaKnown RBP15.89■□□□□ 0.13
VRK3-205ENST00000593919 EPB41L2O43491 1005 aaKnown RBP15.89■□□□□ 0.13
VRK3-205ENST00000593919 UFL1O94874 794 aa15.89■□□□□ 0.13
VRK3-205ENST00000593919 CHRNA5P30532 468 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms