RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 SCN9AQ15858 1988 aa9.75□□□□□ -0.85
VAT1-209ENST00000592388 EVI5O60447 810 aa9.74□□□□□ -0.85
VAT1-209ENST00000592388 ZBTB48P10074 688 aaPredicted RBP9.74□□□□□ -0.85
VAT1-209ENST00000592388 GIGYF2Q6Y7W6 1299 aaKnown RBP9.74□□□□□ -0.85
VAT1-209ENST00000592388 UBE2Q1Q7Z7E8 422 aa9.74□□□□□ -0.85
VAT1-209ENST00000592388 CELF1Q92879 486 aaKnown RBP9.74□□□□□ -0.85
VAT1-209ENST00000592388 PTPN18Q99952 460 aa9.74□□□□□ -0.85
VAT1-209ENST00000592388 ZC3H12CQ9C0D7 883 aaKnown RBP9.74□□□□□ -0.85
VAT1-209ENST00000592388 DDX60Q8IY21 1712 aaKnown RBP9.73□□□□□ -0.85
VAT1-209ENST00000592388 HTATSF1O43719 755 aaKnown RBP9.73□□□□□ -0.85
VAT1-209ENST00000592388 ECM2O94769 699 aaPredicted RBP9.73□□□□□ -0.85
VAT1-209ENST00000592388 TAF7Q15545 349 aaPredicted RBP9.73□□□□□ -0.85
VAT1-209ENST00000592388 NFE2L2Q16236 605 aa9.73□□□□□ -0.85
VAT1-209ENST00000592388 TBC1D16Q8TBP0 767 aa9.73□□□□□ -0.85
VAT1-209ENST00000592388 ZNF428Q96B54 188 aa9.73□□□□□ -0.85
VAT1-209ENST00000592388 GMLQ99445 158 aa9.73□□□□□ -0.85
VAT1-209ENST00000592388 ARHGAP39Q9C0H5 1083 aa9.73□□□□□ -0.85
VAT1-209ENST00000592388 WNT10BO00744 389 aa9.72□□□□□ -0.85
VAT1-209ENST00000592388 SASH1O94885 1247 aa9.72□□□□□ -0.85
VAT1-209ENST00000592388 GJA5P36382 358 aa9.72□□□□□ -0.85
VAT1-209ENST00000592388 NKX2-3Q8TAU0 364 aa9.72□□□□□ -0.85
VAT1-209ENST00000592388 NECTIN2Q92692 538 aa9.72□□□□□ -0.85
VAT1-209ENST00000592388 FARP2O94887 1054 aaPredicted RBP9.71□□□□□ -0.86
VAT1-209ENST00000592388 PLA2G5P39877 138 aa9.71□□□□□ -0.86
VAT1-209ENST00000592388 GJA8P48165 433 aa9.71□□□□□ -0.86
VAT1-209ENST00000592388 BCAMP50895 628 aa9.71□□□□□ -0.86
VAT1-209ENST00000592388 FAM122AQ96E09 287 aa9.71□□□□□ -0.86
VAT1-209ENST00000592388 RPTORQ8N122 1335 aa9.71□□□□□ -0.86
VAT1-209ENST00000592388 MAPK8IP3Q9UPT6 1336 aa9.71□□□□□ -0.86
VAT1-209ENST00000592388 MUC3AQ02505 3323 aa9.71□□□□□ -0.86
VAT1-209ENST00000592388 TTC28Q96AY4 2481 aa9.7□□□□□ -0.86
VAT1-209ENST00000592388 UFL1O94874 794 aa9.7□□□□□ -0.86
VAT1-209ENST00000592388 NEFMP07197 916 aa9.7□□□□□ -0.86
VAT1-209ENST00000592388 EIF4A1P60842 406 aaKnown RBP9.7□□□□□ -0.86
VAT1-209ENST00000592388 TAF1CQ15572 869 aaPredicted RBP9.7□□□□□ -0.86
VAT1-209ENST00000592388 GDF15Q99988 308 aa9.7□□□□□ -0.86
VAT1-209ENST00000592388 MXD3Q9BW11 206 aa9.7□□□□□ -0.86
VAT1-209ENST00000592388 RNF208Q9H0X6 261 aa9.7□□□□□ -0.86
VAT1-209ENST00000592388 ZFYVE28Q9HCC9 887 aa9.7□□□□□ -0.86
VAT1-209ENST00000592388 TRMT112Q9UI30 125 aaKnown RBP9.7□□□□□ -0.86
VAT1-209ENST00000592388 LRRC37AA6NMS7 1700 aa9.7□□□□□ -0.86
VAT1-209ENST00000592388 TESPA1A2RU30 521 aaPredicted RBP9.69□□□□□ -0.86
VAT1-209ENST00000592388 USP17L3A6NCW0 530 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 USP17L4A6NCW7 530 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 GJB1P08034 283 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 CCL5P13501 91 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 BMP8BP34820 402 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 KIF22Q14807 665 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 MAP3K11Q16584 847 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 LRIT3Q3SXY7 679 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 USP17L1Q7RTZ2 530 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 NLRP10Q86W26 655 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 APOBEC3FQ8IUX4 373 aaKnown RBP9.69□□□□□ -0.86
VAT1-209ENST00000592388 CCDC146Q8IYE0 955 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 OGFOD1Q8N543 542 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 SH3TC1Q8TE82 1336 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 FAM161BQ96MY7 647 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 GUCD1Q96NT3 240 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 SPEF2Q9C093 1822 aa9.69□□□□□ -0.86
VAT1-209ENST00000592388 EYSQ5T1H1 3165 aa9.68□□□□□ -0.86
VAT1-209ENST00000592388 IRS2Q9Y4H2 1338 aa9.68□□□□□ -0.86
VAT1-209ENST00000592388 PPP1R12BO60237 982 aaPredicted RBP9.68□□□□□ -0.86
VAT1-209ENST00000592388 ANXA1P04083 346 aa9.68□□□□□ -0.86
VAT1-209ENST00000592388 LACTBP83111 547 aaPredicted RBP9.68□□□□□ -0.86
VAT1-209ENST00000592388 DDX10Q13206 875 aaKnown RBP9.68□□□□□ -0.86
VAT1-209ENST00000592388 PROSER3Q2NL68 480 aa9.68□□□□□ -0.86
VAT1-209ENST00000592388 U2AF1L4Q8WU68 220 aaKnown RBP9.68□□□□□ -0.86
VAT1-209ENST00000592388 FBXW7Q969H0 707 aa9.68□□□□□ -0.86
VAT1-209ENST00000592388 ANKIB1Q9P2G1 1089 aa9.68□□□□□ -0.86
VAT1-209ENST00000592388 BIN2Q9UBW5 565 aaPredicted RBP9.68□□□□□ -0.86
VAT1-209ENST00000592388 TSPYL4Q9UJ04 414 aa9.68□□□□□ -0.86
VAT1-209ENST00000592388 GGA1Q9UJY5 639 aa9.68□□□□□ -0.86
VAT1-209ENST00000592388 ZMYND8Q9ULU4 1186 aaPredicted RBP9.68□□□□□ -0.86
VAT1-209ENST00000592388 ZSWIM8A7E2V4 1837 aa9.68□□□□□ -0.86
VAT1-209ENST00000592388 COL4A1P02462 1669 aa9.67□□□□□ -0.86
VAT1-209ENST00000592388 RIPK4P57078 832 aa9.67□□□□□ -0.86
VAT1-209ENST00000592388 KRT24Q2M2I5 525 aa9.67□□□□□ -0.86
VAT1-209ENST00000592388 LRP10Q7Z4F1 713 aa9.67□□□□□ -0.86
VAT1-209ENST00000592388 TDHQ8IZJ6 230 aa9.67□□□□□ -0.86
VAT1-209ENST00000592388 PNISRQ8TF01 805 aaKnown RBP9.67□□□□□ -0.86
VAT1-209ENST00000592388 BRI3BPQ8WY22 251 aa9.67□□□□□ -0.86
VAT1-209ENST00000592388 DEFB129Q9H1M3 183 aa9.67□□□□□ -0.86
VAT1-209ENST00000592388 MYBBP1AQ9BQG0 1328 aaKnown RBP9.66□□□□□ -0.86
VAT1-209ENST00000592388 CCL15-CCL14A0A0B4J2E2 113 aa9.66□□□□□ -0.86
VAT1-209ENST00000592388 EIF2S2P20042 333 aaKnown RBP9.66□□□□□ -0.86
VAT1-209ENST00000592388 HOXD11P31277 338 aaPredicted RBP9.66□□□□□ -0.86
VAT1-209ENST00000592388 GRK4P32298 578 aa9.66□□□□□ -0.86
VAT1-209ENST00000592388 TMPOP42166 694 aaKnown RBP9.66□□□□□ -0.86
VAT1-209ENST00000592388 RPS8P62241 208 aaKnown RBP9.66□□□□□ -0.86
VAT1-209ENST00000592388 RALBP1Q15311 655 aa9.66□□□□□ -0.86
VAT1-209ENST00000592388 CCL15Q16663 113 aa9.66□□□□□ -0.86
VAT1-209ENST00000592388 C7orf61Q8IZ16 206 aa9.66□□□□□ -0.86
VAT1-209ENST00000592388 FAM43AQ8N2R8 423 aa9.66□□□□□ -0.86
VAT1-209ENST00000592388 RAET1EQ8TD07 263 aa9.66□□□□□ -0.86
VAT1-209ENST00000592388 OPTNQ96CV9 577 aa9.66□□□□□ -0.86
VAT1-209ENST00000592388 MS4A4AQ96JQ5 239 aa9.66□□□□□ -0.86
VAT1-209ENST00000592388 ELP3Q9H9T3 547 aa9.66□□□□□ -0.86
VAT1-209ENST00000592388 PODXL2Q9NZ53 605 aa9.66□□□□□ -0.86
VAT1-209ENST00000592388 RIPOR2Q9Y4F9 1068 aa9.66□□□□□ -0.86
VAT1-209ENST00000592388 MYH3P11055 1940 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms