RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 SLC16A10Q8TF71 515 aa8.14□□□□□ -1.11
VPS4B-205ENST00000591383 SSH1Q8WYL5 1049 aa8.14□□□□□ -1.11
VPS4B-205ENST00000591383 NIP7Q9Y221 180 aaKnown RBP eCLIP8.14□□□□□ -1.11
VPS4B-205ENST00000591383 CACNA1SQ13698 1873 aa8.14□□□□□ -1.11
VPS4B-205ENST00000591383 ANKRD31Q8N7Z5 1873 aa8.14□□□□□ -1.11
VPS4B-205ENST00000591383 C10orf71Q711Q0 1435 aa8.13□□□□□ -1.11
VPS4B-205ENST00000591383 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.13□□□□□ -1.11
VPS4B-205ENST00000591383 CFAP99D6REC4 459 aa8.13□□□□□ -1.11
VPS4B-205ENST00000591383 DDR1Q08345 913 aa8.13□□□□□ -1.11
VPS4B-205ENST00000591383 NFIXQ14938 502 aa8.13□□□□□ -1.11
VPS4B-205ENST00000591383 HLFQ16534 295 aa8.13□□□□□ -1.11
VPS4B-205ENST00000591383 ALDH1L2Q3SY69 923 aa8.13□□□□□ -1.11
VPS4B-205ENST00000591383 TBC1D9BQ66K14 1250 aa8.13□□□□□ -1.11
VPS4B-205ENST00000591383 HELBQ8NG08 1087 aaPredicted RBP8.13□□□□□ -1.11
VPS4B-205ENST00000591383 SP7Q8TDD2 431 aaPredicted RBP8.13□□□□□ -1.11
VPS4B-205ENST00000591383 MYD88Q99836 296 aa8.13□□□□□ -1.11
VPS4B-205ENST00000591383 ZBED2Q9BTP6 218 aa8.13□□□□□ -1.11
VPS4B-205ENST00000591383 PPP1R12CQ9BZL4 782 aa8.13□□□□□ -1.11
VPS4B-205ENST00000591383 MAP3K2Q9Y2U5 619 aa8.13□□□□□ -1.11
VPS4B-205ENST00000591383 PARP3Q9Y6F1 533 aa8.13□□□□□ -1.11
VPS4B-205ENST00000591383 KIF13BQ9NQT8 1826 aa8.13□□□□□ -1.11
VPS4B-205ENST00000591383 DDX60Q8IY21 1712 aaKnown RBP8.12□□□□□ -1.11
VPS4B-205ENST00000591383 KIAA1551Q9HCM1 1747 aa8.12□□□□□ -1.11
VPS4B-205ENST00000591383 UBN2Q6ZU65 1347 aa8.12□□□□□ -1.11
VPS4B-205ENST00000591383 RARSP54136 660 aaKnown RBP8.12□□□□□ -1.11
VPS4B-205ENST00000591383 HSP90AB3PQ58FF7 597 aa8.12□□□□□ -1.11
VPS4B-205ENST00000591383 TMCO4Q5TGY1 634 aa8.12□□□□□ -1.11
VPS4B-205ENST00000591383 SLC4A10Q6U841 1118 aa8.12□□□□□ -1.11
VPS4B-205ENST00000591383 ANKRD13DQ6ZTN6 518 aa8.12□□□□□ -1.11
VPS4B-205ENST00000591383 NBPF5PQ86XG9 351 aaPredicted RBP8.12□□□□□ -1.11
VPS4B-205ENST00000591383 NLGN1Q8N2Q7 840 aa8.12□□□□□ -1.11
VPS4B-205ENST00000591383 MRPL50Q8N5N7 158 aaKnown RBP8.12□□□□□ -1.11
VPS4B-205ENST00000591383 CNBD1Q8NA66 436 aa8.12□□□□□ -1.11
VPS4B-205ENST00000591383 PLBD2Q8NHP8 589 aa8.12□□□□□ -1.11
VPS4B-205ENST00000591383 TSC1Q92574 1164 aa8.12□□□□□ -1.11
VPS4B-205ENST00000591383 FRAT1Q92837 279 aaPredicted RBP8.12□□□□□ -1.11
VPS4B-205ENST00000591383 SETDB2Q96T68 719 aa8.12□□□□□ -1.11
VPS4B-205ENST00000591383 ALG2Q9H553 416 aa8.12□□□□□ -1.11
VPS4B-205ENST00000591383 DLEC1Q9Y238 1755 aa8.12□□□□□ -1.11
VPS4B-205ENST00000591383 MYH3P11055 1940 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 ABCC12Q96J65 1359 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 IBTKQ9P2D0 1353 aaPredicted RBP8.11□□□□□ -1.11
VPS4B-205ENST00000591383 PTPRCP08575 1304 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 PI4KAP2A4QPH2 592 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 ERVV-1B6SEH8 477 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 F6X3S4 739 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 ATP5J2-PTCD1G3V325 749 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 POLRMTO00411 1230 aaKnown RBP8.11□□□□□ -1.11
VPS4B-205ENST00000591383 BCAR3O75815 825 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 NEXNQ0ZGT2 675 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 PI4KAP1Q8N8J0 262 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 RGS22Q8NE09 1264 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 EPS8L1Q8TE68 723 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 DNAAF4Q8WXU2 420 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 SCUBE2Q9NQ36 999 aa8.11□□□□□ -1.11
VPS4B-205ENST00000591383 SPEF2Q9C093 1822 aa8.1□□□□□ -1.11
VPS4B-205ENST00000591383 C6orf229H3BNL8 230 aa8.1□□□□□ -1.11
VPS4B-205ENST00000591383 GTF2E1P29083 439 aaPredicted RBP8.1□□□□□ -1.11
VPS4B-205ENST00000591383 ST5P78524 1137 aa8.1□□□□□ -1.11
VPS4B-205ENST00000591383 POTEHQ6S545 545 aa8.1□□□□□ -1.11
VPS4B-205ENST00000591383 CLEC4GQ6UXB4 293 aa8.1□□□□□ -1.11
VPS4B-205ENST00000591383 KSR2Q6VAB6 950 aa8.1□□□□□ -1.11
VPS4B-205ENST00000591383 CCDC24Q8N4L8 307 aa8.1□□□□□ -1.11
VPS4B-205ENST00000591383 RCAN3Q9UKA8 241 aa8.1□□□□□ -1.11
VPS4B-205ENST00000591383 USTQ9Y2C2 406 aa8.1□□□□□ -1.11
VPS4B-205ENST00000591383 PALM3A6NDB9 673 aaPredicted RBP8.09□□□□□ -1.11
VPS4B-205ENST00000591383 SERPINB2P05120 415 aa8.09□□□□□ -1.11
VPS4B-205ENST00000591383 PSEN2P49810 448 aa8.09□□□□□ -1.11
VPS4B-205ENST00000591383 FUT2Q10981 343 aa8.09□□□□□ -1.11
VPS4B-205ENST00000591383 TCIRG1Q13488 830 aa8.09□□□□□ -1.11
VPS4B-205ENST00000591383 CWF19L2Q2TBE0 894 aaKnown RBP8.09□□□□□ -1.11
VPS4B-205ENST00000591383 GRIPAP1Q4V328 841 aa8.09□□□□□ -1.11
VPS4B-205ENST00000591383 PARP10Q53GL7 1025 aa8.09□□□□□ -1.11
VPS4B-205ENST00000591383 NLRP10Q86W26 655 aa8.09□□□□□ -1.11
VPS4B-205ENST00000591383 FTSJ3Q8IY81 847 aaKnown RBP8.09□□□□□ -1.11
VPS4B-205ENST00000591383 METTL22Q9BUU2 404 aaPredicted RBP8.09□□□□□ -1.11
VPS4B-205ENST00000591383 API5Q9BZZ5 524 aaKnown RBP8.09□□□□□ -1.11
VPS4B-205ENST00000591383 NYXQ9GZU5 481 aa8.09□□□□□ -1.11
VPS4B-205ENST00000591383 CWC25Q9NXE8 425 aaPredicted RBP8.09□□□□□ -1.11
VPS4B-205ENST00000591383 RABGEF1Q9UJ41 708 aa8.09□□□□□ -1.11
VPS4B-205ENST00000591383 NOB1Q9ULX3 412 aaKnown RBP8.09□□□□□ -1.11
VPS4B-205ENST00000591383 BRCA1P38398 1863 aaKnown RBP8.09□□□□□ -1.12
VPS4B-205ENST00000591383 NTSR2O95665 410 aa8.08□□□□□ -1.12
VPS4B-205ENST00000591383 MFAP1P55081 439 aaKnown RBP8.08□□□□□ -1.12
VPS4B-205ENST00000591383 PRR5LQ6MZQ0 368 aa8.08□□□□□ -1.12
VPS4B-205ENST00000591383 MAMSTRQ6ZN01 415 aa8.08□□□□□ -1.12
VPS4B-205ENST00000591383 PPP1R42Q7Z4L9 355 aa8.08□□□□□ -1.12
VPS4B-205ENST00000591383 ZNF34Q8IZ26 560 aa8.08□□□□□ -1.12
VPS4B-205ENST00000591383 UTP14AQ9BVJ6 771 aaKnown RBP8.08□□□□□ -1.12
VPS4B-205ENST00000591383 FHDC1Q9C0D6 1143 aaPredicted RBP8.08□□□□□ -1.12
VPS4B-205ENST00000591383 SEPT9Q9UHD8 586 aaPredicted RBP8.08□□□□□ -1.12
VPS4B-205ENST00000591383 TRMT112Q9UI30 125 aaKnown RBP8.08□□□□□ -1.12
VPS4B-205ENST00000591383 WWC3Q9ULE0 1092 aa8.08□□□□□ -1.12
VPS4B-205ENST00000591383 TNNQ9UQP3 1299 aa8.08□□□□□ -1.12
VPS4B-205ENST00000591383 ABCC4O15439 1325 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 SH3TC1Q8TE82 1336 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 RIC1Q4ADV7 1423 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 GOLGB1Q14789 3259 aaKnown RBP8.07□□□□□ -1.12
VPS4B-205ENST00000591383 NEURL1BA8MQ27 555 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 PATL2C9JE40 543 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms