RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 KCNQ4P56696 695 aa13.02□□□□□ -0.32
GFAP-216ENST00000589701 PLCB2Q00722 1185 aa13.02□□□□□ -0.32
GFAP-216ENST00000589701 CAMK4Q16566 473 aa13.02□□□□□ -0.32
GFAP-216ENST00000589701 CCDC57Q2TAC2 916 aa13.02□□□□□ -0.32
GFAP-216ENST00000589701 CCDC125Q86Z20 511 aa13.02□□□□□ -0.32
GFAP-216ENST00000589701 MCMDC2Q4G0Z9 681 aa13.02□□□□□ -0.33
GFAP-216ENST00000589701 GORABQ5T7V8 394 aa13.02□□□□□ -0.33
GFAP-216ENST00000589701 KCNB2Q92953 911 aa13.02□□□□□ -0.33
GFAP-216ENST00000589701 NEK1Q96PY6 1258 aa13.02□□□□□ -0.33
GFAP-216ENST00000589701 ZBTB1Q9Y2K1 713 aa13.02□□□□□ -0.33
GFAP-216ENST00000589701 M0R2C6 588 aa13.01□□□□□ -0.33
GFAP-216ENST00000589701 HIP1O00291 1037 aa13.01□□□□□ -0.33
GFAP-216ENST00000589701 KDM4AO75164 1064 aa13.01□□□□□ -0.33
GFAP-216ENST00000589701 VPS72Q15906 364 aa13.01□□□□□ -0.33
GFAP-216ENST00000589701 RNF20Q5VTR2 975 aa13.01□□□□□ -0.33
GFAP-216ENST00000589701 KBTBD3Q8NAB2 608 aa13.01□□□□□ -0.33
GFAP-216ENST00000589701 CCDC191Q8NCU4 936 aa13.01□□□□□ -0.33
GFAP-216ENST00000589701 GREM2Q9H772 168 aa13.01□□□□□ -0.33
GFAP-216ENST00000589701 HCLS1P14317 486 aaPredicted RBP13.01□□□□□ -0.33
GFAP-216ENST00000589701 CDK11BP21127 795 aaKnown RBP13.01□□□□□ -0.33
GFAP-216ENST00000589701 GUCY1B3Q02153 619 aa13.01□□□□□ -0.33
GFAP-216ENST00000589701 TCIRG1Q13488 830 aa13.01□□□□□ -0.33
GFAP-216ENST00000589701 TM6SF1Q9BZW5 370 aa13.01□□□□□ -0.33
GFAP-216ENST00000589701 FTOQ9C0B1 505 aaKnown RBP eCLIP13.01□□□□□ -0.33
GFAP-216ENST00000589701 DENND2AQ9ULE3 1009 aa13.01□□□□□ -0.33
GFAP-216ENST00000589701 MBD3O95983 291 aa13□□□□□ -0.33
GFAP-216ENST00000589701 APOBRQ0VD83 1088 aa13□□□□□ -0.33
GFAP-216ENST00000589701 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
GFAP-216ENST00000589701 WASHC4Q2M389 1173 aa13□□□□□ -0.33
GFAP-216ENST00000589701 OSBP2Q969R2 916 aa13□□□□□ -0.33
GFAP-216ENST00000589701 ISY1Q9ULR0 285 aaKnown RBP13□□□□□ -0.33
GFAP-216ENST00000589701 EPB41L2O43491 1005 aaKnown RBP13□□□□□ -0.33
GFAP-216ENST00000589701 PSMA5P28066 241 aa13□□□□□ -0.33
GFAP-216ENST00000589701 XAGE2Q96GT9 111 aa13□□□□□ -0.33
GFAP-216ENST00000589701 PARP4Q9UKK3 1724 aaKnown RBP13□□□□□ -0.33
GFAP-216ENST00000589701 TOGARAM1Q9Y4F4 1720 aa13□□□□□ -0.33
GFAP-216ENST00000589701 ZAP70P43403 619 aa12.99□□□□□ -0.33
GFAP-216ENST00000589701 CCDC173Q0VFZ6 552 aa12.99□□□□□ -0.33
GFAP-216ENST00000589701 DNTTIP2Q5QJE6 756 aaKnown RBP12.99□□□□□ -0.33
GFAP-216ENST00000589701 TTC6Q86TZ1 520 aa12.99□□□□□ -0.33
GFAP-216ENST00000589701 NKX2-3Q8TAU0 364 aa12.99□□□□□ -0.33
GFAP-216ENST00000589701 CHMP4CQ96CF2 233 aa12.99□□□□□ -0.33
GFAP-216ENST00000589701 CEP126Q9P2H0 1117 aa12.99□□□□□ -0.33
GFAP-216ENST00000589701 MAST3O60307 1309 aa12.99□□□□□ -0.33
GFAP-216ENST00000589701 HSPD1P10809 573 aaKnown RBP12.99□□□□□ -0.33
GFAP-216ENST00000589701 IL15P40933 162 aaPredicted RBP12.99□□□□□ -0.33
GFAP-216ENST00000589701 COL14A1Q05707 1796 aaKnown RBP12.99□□□□□ -0.33
GFAP-216ENST00000589701 SHANK3Q9BYB0 1731 aa12.99□□□□□ -0.33
GFAP-216ENST00000589701 ISCA1Q9BUE6 129 aa12.98□□□□□ -0.33
GFAP-216ENST00000589701 TSPY26PQ9H489 355 aa12.98□□□□□ -0.33
GFAP-216ENST00000589701 SH2B1Q9NRF2 756 aaPredicted RBP12.98□□□□□ -0.33
GFAP-216ENST00000589701 TJP1Q07157 1748 aa12.98□□□□□ -0.33
GFAP-216ENST00000589701 SCRN1Q12765 414 aa12.98□□□□□ -0.33
GFAP-216ENST00000589701 KIF6Q6ZMV9 814 aa12.98□□□□□ -0.33
GFAP-216ENST00000589701 STK11IPQ8N1F8 1099 aa12.98□□□□□ -0.33
GFAP-216ENST00000589701 PPP1R9BQ96SB3 815 aa12.98□□□□□ -0.33
GFAP-216ENST00000589701 PUS7LQ9H0K6 701 aaKnown RBP12.98□□□□□ -0.33
GFAP-216ENST00000589701 GJB4Q9NTQ9 266 aa12.98□□□□□ -0.33
GFAP-216ENST00000589701 USP25Q9UHP3 1055 aa12.98□□□□□ -0.33
GFAP-216ENST00000589701 LIG1P18858 919 aa12.97□□□□□ -0.33
GFAP-216ENST00000589701 ITGA6P23229 1130 aa12.97□□□□□ -0.33
GFAP-216ENST00000589701 TTC39AQ5SRH9 613 aa12.97□□□□□ -0.33
GFAP-216ENST00000589701 USPL1Q5W0Q7 1092 aa12.97□□□□□ -0.33
GFAP-216ENST00000589701 LDHAL6AQ6ZMR3 332 aa12.97□□□□□ -0.33
GFAP-216ENST00000589701 ZSCAN31Q96LW9 406 aaPredicted RBP12.97□□□□□ -0.33
GFAP-216ENST00000589701 IFIT5Q13325 482 aaKnown RBP12.97□□□□□ -0.33
GFAP-216ENST00000589701 CKAP2LQ8IYA6 745 aa12.97□□□□□ -0.33
GFAP-216ENST00000589701 TRMT112Q9UI30 125 aaKnown RBP12.97□□□□□ -0.33
GFAP-216ENST00000589701 NRAPQ86VF7 1730 aa12.97□□□□□ -0.33
GFAP-216ENST00000589701 PLEKHG2Q9H7P9 1386 aa12.97□□□□□ -0.33
GFAP-216ENST00000589701 LAMB4A4D0S4 1761 aa12.97□□□□□ -0.33
GFAP-216ENST00000589701 A0A087WWV3 80 aa12.96□□□□□ -0.33
GFAP-216ENST00000589701 FOXP2O15409 715 aa12.96□□□□□ -0.33
GFAP-216ENST00000589701 STARD3NLO95772 234 aa12.96□□□□□ -0.33
GFAP-216ENST00000589701 METTL24Q5JXM2 366 aa12.96□□□□□ -0.33
GFAP-216ENST00000589701 OTUD7BQ6GQQ9 843 aa12.96□□□□□ -0.33
GFAP-216ENST00000589701 MAP7D2Q96T17 732 aa12.96□□□□□ -0.33
GFAP-216ENST00000589701 INCENPQ9NQS7 918 aa12.96□□□□□ -0.33
GFAP-216ENST00000589701 NUP188Q5SRE5 1749 aa12.96□□□□□ -0.33
GFAP-216ENST00000589701 WTIPA6NIX2 430 aaPredicted RBP12.96□□□□□ -0.33
GFAP-216ENST00000589701 ONECUT3O60422 494 aaPredicted RBP12.96□□□□□ -0.33
GFAP-216ENST00000589701 NLRP10Q86W26 655 aa12.96□□□□□ -0.33
GFAP-216ENST00000589701 UBR2Q8IWV8 1755 aa12.96□□□□□ -0.34
GFAP-216ENST00000589701 PATL2C9JE40 543 aaKnown RBP12.96□□□□□ -0.34
GFAP-216ENST00000589701 E7EWF7 191 aa12.96□□□□□ -0.34
GFAP-216ENST00000589701 CYP19A1P11511 503 aaPredicted RBP12.96□□□□□ -0.34
GFAP-216ENST00000589701 UBE2HP62256 183 aa12.96□□□□□ -0.34
GFAP-216ENST00000589701 CNNM1Q9NRU3 951 aa12.96□□□□□ -0.34
GFAP-216ENST00000589701 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.96□□□□□ -0.34
GFAP-216ENST00000589701 BRWD3Q6RI45 1802 aa12.95□□□□□ -0.34
GFAP-216ENST00000589701 FAM43BQ6ZT52 329 aaPredicted RBP12.95□□□□□ -0.34
GFAP-216ENST00000589701 SEPT12Q8IYM1 358 aa12.95□□□□□ -0.34
GFAP-216ENST00000589701 TTLL11Q8NHH1 800 aa12.95□□□□□ -0.34
GFAP-216ENST00000589701 GTF3C6Q969F1 213 aa12.95□□□□□ -0.34
GFAP-216ENST00000589701 UTRNP46939 3433 aa12.95□□□□□ -0.34
GFAP-216ENST00000589701 UBN2Q6ZU65 1347 aa12.95□□□□□ -0.34
GFAP-216ENST00000589701 IRS4O14654 1257 aaPredicted RBP12.95□□□□□ -0.34
GFAP-216ENST00000589701 RNF113AO15541 343 aaKnown RBP12.95□□□□□ -0.34
GFAP-216ENST00000589701 RXRAP19793 462 aa12.95□□□□□ -0.34
GFAP-216ENST00000589701 MCAMP43121 646 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms