RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 PHACTR1Q9C0D0 580 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 EXOC5O00471 708 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 POLE2P56282 527 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 NUCB1Q02818 461 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 TYRO3Q06418 890 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 ZBTB17Q13105 803 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 CHAMP1Q96JM3 812 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 RPGRIP1LQ68CZ1 1315 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 OPA1O60313 960 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 KRT38O76015 456 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 CCDC170Q8IYT3 715 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 RABGGTAQ92696 567 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 HELLSQ9NRZ9 838 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 HYPKQ9NX55 129 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 AKAP2Q9Y2D5 859 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 A6NNZ2 444 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 TUBBP07437 444 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 FOSBP53539 338 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 RASA3Q14644 834 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 SEPT7Q16181 437 aaKnown RBP8.85□□□□□ -0.99
LAMA3-210ENST00000588770 TBC1D25Q3MII6 688 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 TUBB8Q3ZCM7 444 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 NAA16Q6N069 864 aaPredicted RBP8.85□□□□□ -0.99
LAMA3-210ENST00000588770 SYNE3Q6ZMZ3 975 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 SAMM50Q9Y512 469 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 GNAT1P11488 350 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 CEBPZQ03701 1054 aaKnown RBP8.85□□□□□ -0.99
LAMA3-210ENST00000588770 CDC37Q16543 378 aaPredicted RBP8.85□□□□□ -0.99
LAMA3-210ENST00000588770 BMP2KLQ5H9B9 411 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 TBC1D9Q6ZT07 1266 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 NANOGNBQ7Z5D8 188 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 PARP9Q8IXQ6 854 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 PARD6BQ9BYG5 372 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 ATP6V0A4Q9HBG4 840 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 LMCD1Q9NZU5 365 aa8.85□□□□□ -0.99
LAMA3-210ENST00000588770 PARP1P09874 1014 aaKnown RBP8.84□□□□□ -0.99
LAMA3-210ENST00000588770 HMGB2P26583 209 aaKnown RBP8.84□□□□□ -0.99
LAMA3-210ENST00000588770 TUBB4BP68371 445 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 KIF4BQ2VIQ3 1234 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 SPATA7Q9P0W8 599 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 TPCN1Q9ULQ1 816 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 NLRP1Q9C000 1473 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 ETF1P62495 437 aaKnown RBP8.84□□□□□ -0.99
LAMA3-210ENST00000588770 ATRIPQ8WXE1 791 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 KAT2BQ92831 832 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 TRIM63Q969Q1 353 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 HOOK2Q96ED9 719 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 YIPF2Q9BWQ6 316 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 ITM2BQ9Y287 266 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 GNGT1P63211 74 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 AKAP17AQ02040 695 aaKnown RBP8.84□□□□□ -0.99
LAMA3-210ENST00000588770 MPP3Q13368 585 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 SMARCC2Q8TAQ2 1214 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 MTA3Q9BTC8 594 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 RNF40O75150 1001 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 ROR2Q01974 943 aaKnown RBP8.84□□□□□ -0.99
LAMA3-210ENST00000588770 CUL4BQ13620 913 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 CAPS2Q9BXY5 557 aa8.84□□□□□ -0.99
LAMA3-210ENST00000588770 MROH2BQ7Z745 1585 aa8.84□□□□□ -1
LAMA3-210ENST00000588770 PPP2R1AP30153 589 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 ATP11CQ8NB49 1132 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 MPHOSPH6Q99547 160 aaKnown RBP8.83□□□□□ -1
LAMA3-210ENST00000588770 CNPY2Q9Y2B0 182 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 NKTRP30414 1462 aaKnown RBP8.83□□□□□ -1
LAMA3-210ENST00000588770 SMARCA5O60264 1052 aaPredicted RBP8.83□□□□□ -1
LAMA3-210ENST00000588770 ZEB2O60315 1214 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 TXLNAP40222 546 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 SDR16C5Q8N3Y7 309 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 MKL1Q969V6 931 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 MYO1EQ12965 1108 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 DAAM2Q86T65 1068 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 AMOTL1Q8IY63 956 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 RABL2AQ9UBK7 228 aaPredicted RBP8.83□□□□□ -1
LAMA3-210ENST00000588770 PHF8Q9UPP1 1060 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 NUP155O75694 1391 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 USP27XA6NNY8 438 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 CHMP2AO43633 222 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 EIF2S2P20042 333 aaKnown RBP8.83□□□□□ -1
LAMA3-210ENST00000588770 PSMC1P62191 440 aaKnown RBP8.83□□□□□ -1
LAMA3-210ENST00000588770 TSR1Q2NL82 804 aaKnown RBP8.83□□□□□ -1
LAMA3-210ENST00000588770 UPF3BQ9BZI7 483 aaKnown RBP8.83□□□□□ -1
LAMA3-210ENST00000588770 VCXQ9H320 206 aa8.83□□□□□ -1
LAMA3-210ENST00000588770 BRD1O95696 1058 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 VIL1P09327 827 aaKnown RBP8.82□□□□□ -1
LAMA3-210ENST00000588770 SCNN1BP51168 640 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 WDR75Q8IWA0 830 aaKnown RBP8.82□□□□□ -1
LAMA3-210ENST00000588770 CCDC12Q8WUD4 166 aaPredicted RBP8.82□□□□□ -1
LAMA3-210ENST00000588770 VCX3BQ9H321 246 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 VCX3AQ9NNX9 186 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 TTC41PQ6P2S7 1318 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 WDHD1O75717 1129 aaPredicted RBP8.82□□□□□ -1
LAMA3-210ENST00000588770 PCK1P35558 622 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 KIAA0753Q2KHM9 967 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 CWF19L1Q69YN2 538 aaKnown RBP8.82□□□□□ -1
LAMA3-210ENST00000588770 TCP11L2Q8N4U5 519 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 HDAC6Q9UBN7 1215 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 G3V3G9 751 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 CHMP4BP1P59074 171 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 KRT85P78386 507 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 DCAF8Q5TAQ9 597 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms