RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 ELNP15502 786 aa8.64□□□□□ -1.03
NF1-223ENST00000584328 ATP11AP98196 1134 aa8.64□□□□□ -1.03
NF1-223ENST00000584328 FMR1NBQ8N0W7 255 aaPredicted RBP8.64□□□□□ -1.03
NF1-223ENST00000584328 C1orf127Q8N9H9 656 aa8.64□□□□□ -1.03
NF1-223ENST00000584328 NACC1Q96RE7 527 aa8.64□□□□□ -1.03
NF1-223ENST00000584328 KANSL3Q9P2N6 904 aa8.64□□□□□ -1.03
NF1-223ENST00000584328 CES1P23141 567 aa8.63□□□□□ -1.03
NF1-223ENST00000584328 EHHADHQ08426 723 aa8.63□□□□□ -1.03
NF1-223ENST00000584328 CCER1Q8TC90 406 aaPredicted RBP8.63□□□□□ -1.03
NF1-223ENST00000584328 TRIM33Q9UPN9 1127 aa8.63□□□□□ -1.03
NF1-223ENST00000584328 ABCA10Q8WWZ4 1543 aa8.63□□□□□ -1.03
NF1-223ENST00000584328 BAG6P46379 1132 aa8.62□□□□□ -1.03
NF1-223ENST00000584328 CEP135Q66GS9 1140 aa8.62□□□□□ -1.03
NF1-223ENST00000584328 GJD3Q8N144 294 aa8.62□□□□□ -1.03
NF1-223ENST00000584328 DTWD1Q8N5C7 304 aa8.62□□□□□ -1.03
NF1-223ENST00000584328 IL22RA1Q8N6P7 574 aa8.62□□□□□ -1.03
NF1-223ENST00000584328 RASSF4Q9H2L5 321 aa8.62□□□□□ -1.03
NF1-223ENST00000584328 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.62□□□□□ -1.03
NF1-223ENST00000584328 ZNF608Q9ULD9 1512 aaPredicted RBP8.62□□□□□ -1.03
NF1-223ENST00000584328 RAD54L2Q9Y4B4 1467 aa8.62□□□□□ -1.03
NF1-223ENST00000584328 SOGA1O94964 1423 aa8.62□□□□□ -1.03
NF1-223ENST00000584328 WDR97A6NE52 1622 aa8.62□□□□□ -1.03
NF1-223ENST00000584328 TNFRSF21O75509 655 aa8.61□□□□□ -1.03
NF1-223ENST00000584328 SMNDC1O75940 238 aaKnown RBP eCLIP8.61□□□□□ -1.03
NF1-223ENST00000584328 ECM1Q16610 540 aa8.61□□□□□ -1.03
NF1-223ENST00000584328 CEP120Q8N960 986 aa8.61□□□□□ -1.03
NF1-223ENST00000584328 CHRDQ9H2X0 955 aa8.61□□□□□ -1.03
NF1-223ENST00000584328 SALL4Q9UJQ4 1053 aa8.61□□□□□ -1.03
NF1-223ENST00000584328 BRPF3Q9ULD4 1205 aa8.61□□□□□ -1.03
NF1-223ENST00000584328 PHACTR2O75167 634 aa8.6□□□□□ -1.03
NF1-223ENST00000584328 SELPP16109 830 aa8.6□□□□□ -1.03
NF1-223ENST00000584328 GATA4P43694 442 aa8.6□□□□□ -1.03
NF1-223ENST00000584328 SHISA2Q6UWI4 295 aa8.6□□□□□ -1.03
NF1-223ENST00000584328 FBXO11Q86XK2 927 aa8.6□□□□□ -1.03
NF1-223ENST00000584328 SNX29Q8TEQ0 813 aa8.6□□□□□ -1.03
NF1-223ENST00000584328 PMEPA1Q969W9 287 aa8.6□□□□□ -1.03
NF1-223ENST00000584328 PBX4Q9BYU1 374 aa8.6□□□□□ -1.03
NF1-223ENST00000584328 FOXD3Q9UJU5 478 aaPredicted RBP8.6□□□□□ -1.03
NF1-223ENST00000584328 C9orf172C9J069 976 aa8.59□□□□□ -1.03
NF1-223ENST00000584328 BRD1O95696 1058 aa8.59□□□□□ -1.03
NF1-223ENST00000584328 ARHGAP4P98171 946 aa8.59□□□□□ -1.03
NF1-223ENST00000584328 CACTIN-AS1Q8N1I8 211 aa8.59□□□□□ -1.03
NF1-223ENST00000584328 LACRTQ9GZZ8 138 aa8.59□□□□□ -1.03
NF1-223ENST00000584328 EIF4G3O43432 1585 aaKnown RBP8.58□□□□□ -1.04
NF1-223ENST00000584328 NDUFB5O43674 189 aa8.58□□□□□ -1.04
NF1-223ENST00000584328 DEAF1O75398 565 aaPredicted RBP8.58□□□□□ -1.04
NF1-223ENST00000584328 LENG1Q96BZ8 264 aaPredicted RBP8.58□□□□□ -1.04
NF1-223ENST00000584328 PPME1Q9Y570 386 aa8.58□□□□□ -1.04
NF1-223ENST00000584328 ABCA5Q8WWZ7 1642 aa8.58□□□□□ -1.04
NF1-223ENST00000584328 EREGO14944 169 aa8.57□□□□□ -1.04
NF1-223ENST00000584328 ACPPP15309 386 aa8.57□□□□□ -1.04
NF1-223ENST00000584328 MUC3BQ9H195 1237 aa8.57□□□□□ -1.04
NF1-223ENST00000584328 USP21Q9UK80 565 aa8.57□□□□□ -1.04
NF1-223ENST00000584328 CDC27P30260 824 aa8.56□□□□□ -1.04
NF1-223ENST00000584328 NRG1Q02297 640 aaPredicted RBP8.56□□□□□ -1.04
NF1-223ENST00000584328 ADAMTSL4Q6UY14 1074 aa8.56□□□□□ -1.04
NF1-223ENST00000584328 POP1Q99575 1024 aaKnown RBP8.56□□□□□ -1.04
NF1-223ENST00000584328 GNEQ9Y223 722 aaKnown RBP8.56□□□□□ -1.04
NF1-223ENST00000584328 AQRO60306 1485 aaKnown RBP eCLIP8.56□□□□□ -1.04
NF1-223ENST00000584328 SOWAHDA6NJG2 315 aa8.55□□□□□ -1.04
NF1-223ENST00000584328 TRPA1O75762 1119 aa8.55□□□□□ -1.04
NF1-223ENST00000584328 PTPRAP18433 802 aa8.55□□□□□ -1.04
NF1-223ENST00000584328 DOC2BQ14184 412 aa8.55□□□□□ -1.04
NF1-223ENST00000584328 ADGRE1Q14246 886 aa8.55□□□□□ -1.04
NF1-223ENST00000584328 MBTPS1Q14703 1052 aa8.55□□□□□ -1.04
NF1-223ENST00000584328 SRA1Q9HD15 236 aaKnown RBP8.55□□□□□ -1.04
NF1-223ENST00000584328 DZANK1Q9NVP4 752 aa8.55□□□□□ -1.04
NF1-223ENST00000584328 TDRD9Q8NDG6 1382 aaKnown RBP8.55□□□□□ -1.04
NF1-223ENST00000584328 FAM177BA6PVY3 158 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 LINC01387J3KSC0 135 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 NFKBIEO00221 500 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 DLL1O00548 723 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 FURINP09958 794 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 EDN3P14138 238 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 CDC25BP30305 580 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 SETDB1Q15047 1291 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 TXNDC11Q6PKC3 985 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 IGF2-ASQ6U949 168 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 MAP4K3Q8IVH8 894 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 HHIPQ96QV1 700 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 OSMRQ99650 979 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 ZFYVE28Q9HCC9 887 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 SH2B1Q9NRF2 756 aaPredicted RBP8.54□□□□□ -1.04
NF1-223ENST00000584328 AMOTL2Q9Y2J4 779 aa8.54□□□□□ -1.04
NF1-223ENST00000584328 GAPVD1Q14C86 1478 aa8.53□□□□□ -1.04
NF1-223ENST00000584328 PDE2AO00408 941 aaPredicted RBP8.53□□□□□ -1.04
NF1-223ENST00000584328 PDE3BQ13370 1112 aa8.53□□□□□ -1.04
NF1-223ENST00000584328 TXNRD3Q86VQ6 643 aa8.53□□□□□ -1.04
NF1-223ENST00000584328 GRIN2BQ13224 1484 aa8.52□□□□□ -1.05
NF1-223ENST00000584328 POLR3DP05423 398 aaPredicted RBP8.52□□□□□ -1.05
NF1-223ENST00000584328 EPHA1P21709 976 aa8.52□□□□□ -1.05
NF1-223ENST00000584328 TMC1Q8TDI8 760 aa8.52□□□□□ -1.05
NF1-223ENST00000584328 DCAF11Q8TEB1 546 aa8.52□□□□□ -1.05
NF1-223ENST00000584328 CITED4Q96RK1 184 aa8.52□□□□□ -1.05
NF1-223ENST00000584328 FAM129BQ96TA1 746 aa8.52□□□□□ -1.05
NF1-223ENST00000584328 ZKSCAN3Q9BRR0 538 aa8.52□□□□□ -1.05
NF1-223ENST00000584328 ADAM19Q9H013 955 aa8.52□□□□□ -1.05
NF1-223ENST00000584328 BIN2Q9UBW5 565 aaPredicted RBP8.52□□□□□ -1.05
NF1-223ENST00000584328 ERICH3Q5RHP9 1530 aa8.51□□□□□ -1.05
NF1-223ENST00000584328 FAM117BQ6P1L5 589 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms