RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 PRR5LQ6MZQ0 368 aa17.86■□□□□ 0.45
CDK5RAP3-218ENST00000580391 PRPF40BQ6NWY9 871 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP3-218ENST00000580391 MAP4K1Q92918 833 aa17.86■□□□□ 0.45
CDK5RAP3-218ENST00000580391 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
CDK5RAP3-218ENST00000580391 UPF3BQ9BZI7 483 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP3-218ENST00000580391 BSDC1Q9NW68 430 aaPredicted RBP17.86■□□□□ 0.45
CDK5RAP3-218ENST00000580391 ANKRD31Q8N7Z5 1873 aa17.85■□□□□ 0.45
CDK5RAP3-218ENST00000580391 MCMDC2Q4G0Z9 681 aa17.84■□□□□ 0.45
CDK5RAP3-218ENST00000580391 ZMYM1Q5SVZ6 1142 aa17.84■□□□□ 0.45
CDK5RAP3-218ENST00000580391 TFCP2L1Q9NZI6 479 aa17.84■□□□□ 0.45
CDK5RAP3-218ENST00000580391 RNF113AO15541 343 aaKnown RBP17.84■□□□□ 0.45
CDK5RAP3-218ENST00000580391 TM4SF1P30408 202 aa17.84■□□□□ 0.45
CDK5RAP3-218ENST00000580391 KCNJ4P48050 445 aa17.84■□□□□ 0.45
CDK5RAP3-218ENST00000580391 DDR1Q08345 913 aa17.84■□□□□ 0.45
CDK5RAP3-218ENST00000580391 NECTIN1Q15223 517 aa17.84■□□□□ 0.45
CDK5RAP3-218ENST00000580391 MINPP1Q9UNW1 487 aa17.84■□□□□ 0.45
CDK5RAP3-218ENST00000580391 NRXN2Q9P2S2 1712 aa17.84■□□□□ 0.45
CDK5RAP3-218ENST00000580391 MAST3O60307 1309 aa17.83■□□□□ 0.45
CDK5RAP3-218ENST00000580391 LAMA4Q16363 1823 aa17.83■□□□□ 0.45
CDK5RAP3-218ENST00000580391 UQCRFS1P1P0C7P4 283 aa17.83■□□□□ 0.44
CDK5RAP3-218ENST00000580391 FOXD4L1Q9NU39 408 aa17.83■□□□□ 0.44
CDK5RAP3-218ENST00000580391 WTIPA6NIX2 430 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-218ENST00000580391 SERPINB2P05120 415 aa17.82■□□□□ 0.44
CDK5RAP3-218ENST00000580391 CYP2E1P05181 493 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-218ENST00000580391 RPS8P62241 208 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-218ENST00000580391 CREB3L3Q68CJ9 461 aa17.82■□□□□ 0.44
CDK5RAP3-218ENST00000580391 TICAM2Q86XR7 235 aa17.82■□□□□ 0.44
CDK5RAP3-218ENST00000580391 KCNB2Q92953 911 aa17.82■□□□□ 0.44
CDK5RAP3-218ENST00000580391 HELLSQ9NRZ9 838 aa17.82■□□□□ 0.44
CDK5RAP3-218ENST00000580391 RASGRF1Q13972 1273 aa17.82■□□□□ 0.44
CDK5RAP3-218ENST00000580391 NBR1Q14596 966 aa17.82■□□□□ 0.44
CDK5RAP3-218ENST00000580391 COL23A1Q86Y22 540 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-218ENST00000580391 PIH1D3Q9NQM4 214 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-218ENST00000580391 HMG20BQ9P0W2 317 aa17.82■□□□□ 0.44
CDK5RAP3-218ENST00000580391 M0R2C6 588 aa17.81■□□□□ 0.44
CDK5RAP3-218ENST00000580391 POLRMTO00411 1230 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-218ENST00000580391 SLC27A2O14975 620 aa17.81■□□□□ 0.44
CDK5RAP3-218ENST00000580391 HMGB2P26583 209 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-218ENST00000580391 BCAMP50895 628 aa17.81■□□□□ 0.44
CDK5RAP3-218ENST00000580391 HSP90AA1P07900 732 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-218ENST00000580391 ADCK5Q3MIX3 580 aa17.8■□□□□ 0.44
CDK5RAP3-218ENST00000580391 SLC51AQ86UW1 340 aa17.8■□□□□ 0.44
CDK5RAP3-218ENST00000580391 OSBP2Q969R2 916 aa17.8■□□□□ 0.44
CDK5RAP3-218ENST00000580391 DDIT3P35638 169 aa17.8■□□□□ 0.44
CDK5RAP3-218ENST00000580391 ST5P78524 1137 aa17.8■□□□□ 0.44
CDK5RAP3-218ENST00000580391 VPS53Q5VIR6 699 aa17.8■□□□□ 0.44
CDK5RAP3-218ENST00000580391 NOL8Q76FK4 1167 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-218ENST00000580391 SPATA5Q8NB90 893 aa17.8■□□□□ 0.44
CDK5RAP3-218ENST00000580391 TAF6LQ9Y6J9 622 aa17.8■□□□□ 0.44
CDK5RAP3-218ENST00000580391 COL1A1P02452 1464 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-218ENST00000580391 ZFYP08048 801 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-218ENST00000580391 CPA1P15085 419 aa17.79■□□□□ 0.44
CDK5RAP3-218ENST00000580391 UBE4AQ14139 1066 aa17.79■□□□□ 0.44
CDK5RAP3-218ENST00000580391 LRRFIP1Q32MZ4 808 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-218ENST00000580391 JAKMIP1Q96N16 626 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-218ENST00000580391 RPAP1Q9BWH6 1393 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-218ENST00000580391 QSER1Q2KHR3 1735 aa17.79■□□□□ 0.44
CDK5RAP3-218ENST00000580391 CASTP20810 708 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-218ENST00000580391 GYG1P46976 350 aa17.79■□□□□ 0.44
CDK5RAP3-218ENST00000580391 TTF1Q15361 905 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-218ENST00000580391 WASHC4Q2M389 1173 aa17.79■□□□□ 0.44
CDK5RAP3-218ENST00000580391 ZNF804BA4D1E1 1349 aa17.79■□□□□ 0.44
CDK5RAP3-218ENST00000580391 PNPLA7Q6ZV29 1317 aa17.79■□□□□ 0.44
CDK5RAP3-218ENST00000580391 COL11A2P13942 1736 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-218ENST00000580391 IDH1O75874 414 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-218ENST00000580391 ZKSCAN1P17029 563 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-218ENST00000580391 GRAPQ13588 217 aa17.78■□□□□ 0.44
CDK5RAP3-218ENST00000580391 GRAPLQ8TC17 118 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-218ENST00000580391 APPBP2Q92624 585 aa17.78■□□□□ 0.44
CDK5RAP3-218ENST00000580391 TTC14Q96N46 770 aa17.78■□□□□ 0.44
CDK5RAP3-218ENST00000580391 KLRK1P26718 216 aa17.77■□□□□ 0.44
CDK5RAP3-218ENST00000580391 ADD2P35612 726 aa17.77■□□□□ 0.44
CDK5RAP3-218ENST00000580391 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.77■□□□□ 0.441e-7■■■□□ 14.8
CDK5RAP3-218ENST00000580391 CHMP5Q9NZZ3 219 aa17.77■□□□□ 0.44
CDK5RAP3-218ENST00000580391 WWC3Q9ULE0 1092 aa17.77■□□□□ 0.44
CDK5RAP3-218ENST00000580391 IQSEC3Q9UPP2 1182 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-218ENST00000580391 U3KPZ7 1027 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-218ENST00000580391 CACNA1SQ13698 1873 aa17.77■□□□□ 0.44
CDK5RAP3-218ENST00000580391 LRRC37AA6NMS7 1700 aa17.77■□□□□ 0.44
CDK5RAP3-218ENST00000580391 COL9A3Q14050 684 aaPredicted RBP17.77■□□□□ 0.43
CDK5RAP3-218ENST00000580391 CRY2Q49AN0 593 aa17.77■□□□□ 0.43
CDK5RAP3-218ENST00000580391 RNF20Q5VTR2 975 aa17.77■□□□□ 0.43
CDK5RAP3-218ENST00000580391 TMX3Q96JJ7 454 aa17.77■□□□□ 0.43
CDK5RAP3-218ENST00000580391 PUS7LQ9H0K6 701 aaKnown RBP17.77■□□□□ 0.43
CDK5RAP3-218ENST00000580391 ANO8Q9HCE9 1232 aaPredicted RBP17.77■□□□□ 0.43
CDK5RAP3-218ENST00000580391 MCM2P49736 904 aa17.76■□□□□ 0.43
CDK5RAP3-218ENST00000580391 EZH2Q15910 746 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-218ENST00000580391 RPGRQ92834 1020 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-218ENST00000580391 DSCC1Q9BVC3 393 aa17.76■□□□□ 0.43
CDK5RAP3-218ENST00000580391 HSPD1P10809 573 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-218ENST00000580391 EN1Q05925 392 aaPredicted RBP17.75■□□□□ 0.43
CDK5RAP3-218ENST00000580391 SLC9C2Q5TAH2 1124 aa17.75■□□□□ 0.43
CDK5RAP3-218ENST00000580391 TM6SF1Q9BZW5 370 aa17.75■□□□□ 0.43
CDK5RAP3-218ENST00000580391 ANKRD2Q9GZV1 360 aa17.75■□□□□ 0.43
CDK5RAP3-218ENST00000580391 PDE6AP16499 860 aa17.75■□□□□ 0.43
CDK5RAP3-218ENST00000580391 AK2P54819 239 aa17.75■□□□□ 0.43
CDK5RAP3-218ENST00000580391 NFKBIBQ15653 356 aa17.75■□□□□ 0.43
CDK5RAP3-218ENST00000580391 ZSCAN25Q6NSZ9 544 aa17.75■□□□□ 0.43
CDK5RAP3-218ENST00000580391 FLAD1Q8NFF5 587 aa17.75■□□□□ 0.43
CDK5RAP3-218ENST00000580391 ZSWIM6Q9HCJ5 1215 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms