RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 PTPN14Q15678 1187 aa17.22■□□□□ 0.35
CUEDC1-206ENST00000577830 PI16Q6UXB8 463 aa17.22■□□□□ 0.35
CUEDC1-206ENST00000577830 STX1AQ16623 288 aa17.21■□□□□ 0.35
CUEDC1-206ENST00000577830 CCDC82Q8N4S0 544 aa17.21■□□□□ 0.35
CUEDC1-206ENST00000577830 TOMM22Q9NS69 142 aa17.21■□□□□ 0.35
CUEDC1-206ENST00000577830 ZNF609O15014 1411 aa17.21■□□□□ 0.35
CUEDC1-206ENST00000577830 RGPD1P0DJD0 1748 aa17.21■□□□□ 0.35
CUEDC1-206ENST00000577830 ELP1O95163 1332 aa17.21■□□□□ 0.35
CUEDC1-206ENST00000577830 HOMER1Q86YM7 354 aa17.21■□□□□ 0.35
CUEDC1-206ENST00000577830 CEP57L1Q8IYX8 460 aa17.21■□□□□ 0.35
CUEDC1-206ENST00000577830 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.35
CUEDC1-206ENST00000577830 GOLGA8BA8MQT2 603 aa17.2■□□□□ 0.34
CUEDC1-206ENST00000577830 E7EWF7 191 aa17.2■□□□□ 0.34
CUEDC1-206ENST00000577830 SYNE3Q6ZMZ3 975 aa17.2■□□□□ 0.34
CUEDC1-206ENST00000577830 TMC6Q7Z403 805 aa17.2■□□□□ 0.34
CUEDC1-206ENST00000577830 NWD1Q149M9 1564 aa17.2■□□□□ 0.34
CUEDC1-206ENST00000577830 SAMD1Q6SPF0 538 aaPredicted RBP17.2■□□□□ 0.34
CUEDC1-206ENST00000577830 KBTBD3Q8NAB2 608 aa17.2■□□□□ 0.34
CUEDC1-206ENST00000577830 KCNB2Q92953 911 aa17.2■□□□□ 0.34
CUEDC1-206ENST00000577830 ZSCAN16Q9H4T2 348 aaPredicted RBP17.2■□□□□ 0.34
CUEDC1-206ENST00000577830 KLF18A0A0U1RQI7 1052 aa17.2■□□□□ 0.34
CUEDC1-206ENST00000577830 LMOD1P29536 600 aaPredicted RBP17.2■□□□□ 0.34
CUEDC1-206ENST00000577830 C8orf76Q96K31 380 aa17.2■□□□□ 0.34
CUEDC1-206ENST00000577830 TTC39AQ5SRH9 613 aa17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 RALYLQ86SE5 291 aaKnown RBP17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 MED23Q9ULK4 1368 aa17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 ADAMTSL3P82987 1691 aa17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 C1orf167Q5SNV9 1468 aa17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 ERBB3P21860 1342 aa17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 HSPD1P10809 573 aaKnown RBP17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 IFNL2Q8IZJ0 200 aa17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 STRN4Q9NRL3 753 aa17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 ORC3Q9UBD5 711 aaPredicted RBP17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 FAM208AQ9UK61 1670 aaKnown RBP17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 CTDNEP1O95476 244 aa17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 TDRD7Q8NHU6 1098 aaKnown RBP17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 COPRSQ9NQ92 184 aa17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 CLIC4Q9Y696 253 aa17.19■□□□□ 0.34
CUEDC1-206ENST00000577830 A0A1B0GUL7 405 aa17.18■□□□□ 0.34
CUEDC1-206ENST00000577830 NCBP1Q09161 790 aaKnown RBP17.18■□□□□ 0.34
CUEDC1-206ENST00000577830 SMAP1Q8IYB5 467 aaPredicted RBP17.18■□□□□ 0.34
CUEDC1-206ENST00000577830 HAUS7Q99871 368 aa17.18■□□□□ 0.34
CUEDC1-206ENST00000577830 CEP126Q9P2H0 1117 aa17.18■□□□□ 0.34
CUEDC1-206ENST00000577830 PHKG2P15735 406 aa17.18■□□□□ 0.34
CUEDC1-206ENST00000577830 LRRC8AQ8IWT6 810 aa17.18■□□□□ 0.34
CUEDC1-206ENST00000577830 ANO10Q9NW15 660 aa17.18■□□□□ 0.34
CUEDC1-206ENST00000577830 IFNKQ9P0W0 207 aa17.18■□□□□ 0.34
CUEDC1-206ENST00000577830 ADORA1P30542 326 aa17.17■□□□□ 0.34
CUEDC1-206ENST00000577830 GOLGA8FQ08AF8 430 aa17.17■□□□□ 0.34
CUEDC1-206ENST00000577830 GOLGA8DPQ0D2H9 430 aa17.17■□□□□ 0.34
CUEDC1-206ENST00000577830 PLA2G4DQ86XP0 818 aa17.17■□□□□ 0.34
CUEDC1-206ENST00000577830 AIFM3Q96NN9 605 aa17.17■□□□□ 0.34
CUEDC1-206ENST00000577830 PCDHA7Q9UN72 937 aa17.17■□□□□ 0.34
CUEDC1-206ENST00000577830 GPTP24298 496 aa17.17■□□□□ 0.34
CUEDC1-206ENST00000577830 NDUFA8P51970 172 aa17.17■□□□□ 0.34
CUEDC1-206ENST00000577830 ZNF215Q9UL58 517 aaPredicted RBP17.17■□□□□ 0.34
CUEDC1-206ENST00000577830 PDIA3P30101 505 aaKnown RBP17.17■□□□□ 0.34
CUEDC1-206ENST00000577830 M0R2C6 588 aa17.16■□□□□ 0.34
CUEDC1-206ENST00000577830 DPCR1Q3MIW9 517 aa17.16■□□□□ 0.34
CUEDC1-206ENST00000577830 PRDM11Q9NQV5 511 aa17.16■□□□□ 0.34
CUEDC1-206ENST00000577830 CHD2O14647 1828 aaKnown RBP17.16■□□□□ 0.34
CUEDC1-206ENST00000577830 PFKFB2O60825 505 aa17.16■□□□□ 0.34
CUEDC1-206ENST00000577830 CCDC57Q2TAC2 916 aa17.16■□□□□ 0.34
CUEDC1-206ENST00000577830 MRPS27Q92552 414 aaKnown RBP17.16■□□□□ 0.34
CUEDC1-206ENST00000577830 SMTNL1A8MU46 457 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 IDH1O75874 414 aaKnown RBP17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 RFX5P48382 616 aaPredicted RBP17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 FAM160A1Q05DH4 1040 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 SPECC1Q5M775 1068 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 CADPS2Q86UW7 1296 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 OSBP2Q969R2 916 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 MYL10Q9BUA6 226 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 PRDM4Q9UKN5 801 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 CYP27B1O15528 508 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 PRC1O43663 620 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 ELF2Q15723 593 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 CWC25Q9NXE8 425 aaPredicted RBP17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 DENND2AQ9ULE3 1009 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 MICU3Q86XE3 530 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 NAT10Q9H0A0 1025 aaKnown RBP17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 MAST3O60307 1309 aa17.15■□□□□ 0.34
CUEDC1-206ENST00000577830 RRP12Q5JTH9 1297 aaKnown RBP17.14■□□□□ 0.33
CUEDC1-206ENST00000577830 TOM1L2Q6ZVM7 507 aa17.14■□□□□ 0.33
CUEDC1-206ENST00000577830 NFAT5O94916 1531 aa17.14■□□□□ 0.33
CUEDC1-206ENST00000577830 IQCB1Q15051 598 aa17.14■□□□□ 0.33
CUEDC1-206ENST00000577830 CCDC158Q5M9N0 1113 aa17.14■□□□□ 0.33
CUEDC1-206ENST00000577830 SYNE4Q8N205 404 aa17.14■□□□□ 0.33
CUEDC1-206ENST00000577830 PDILTQ8N807 584 aa17.14■□□□□ 0.33
CUEDC1-206ENST00000577830 RNF113AO15541 343 aaKnown RBP17.14■□□□□ 0.33
CUEDC1-206ENST00000577830 SLC3A2P08195 630 aaKnown RBP17.14■□□□□ 0.33
CUEDC1-206ENST00000577830 ZSCAN20P17040 1043 aaPredicted RBP17.14■□□□□ 0.33
CUEDC1-206ENST00000577830 ERICH4A6NGS2 130 aa17.13■□□□□ 0.33
CUEDC1-206ENST00000577830 HMGB1P09429 215 aaKnown RBP17.13■□□□□ 0.33
CUEDC1-206ENST00000577830 GTF2F1P35269 517 aaKnown RBP eCLIP17.13■□□□□ 0.33
CUEDC1-206ENST00000577830 IMMTQ16891 758 aaKnown RBP17.13■□□□□ 0.33
CUEDC1-206ENST00000577830 SYT10Q6XYQ8 523 aa17.13■□□□□ 0.33
CUEDC1-206ENST00000577830 PHKBQ93100 1093 aa17.13■□□□□ 0.33
CUEDC1-206ENST00000577830 XPO4Q9C0E2 1151 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms