RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 TAF1P21675 1872 aa34.97■■■■□ 3.19
CTDNEP1-208ENST00000573600 PHKA1P46020 1223 aa34.96■■■■□ 3.19
CTDNEP1-208ENST00000573600 CHMP5Q9NZZ3 219 aa34.96■■■■□ 3.19
CTDNEP1-208ENST00000573600 RPS8P62241 208 aaKnown RBP34.95■■■■□ 3.19
CTDNEP1-208ENST00000573600 RGS17Q9UGC6 210 aaPredicted RBP34.95■■■■□ 3.19
CTDNEP1-208ENST00000573600 RGPD3A6NKT7 1758 aaPredicted RBP34.95■■■■□ 3.19
CTDNEP1-208ENST00000573600 RGPD4Q7Z3J3 1758 aa34.95■■■■□ 3.19
CTDNEP1-208ENST00000573600 CREB3L3Q68CJ9 461 aa34.95■■■■□ 3.18
CTDNEP1-208ENST00000573600 CELF1Q92879 486 aaKnown RBP34.95■■■■□ 3.18
CTDNEP1-208ENST00000573600 TNRC6CQ9HCJ0 1690 aaKnown RBP34.94■■■■□ 3.18
CTDNEP1-208ENST00000573600 SEC62Q99442 399 aaKnown RBP34.94■■■■□ 3.18
CTDNEP1-208ENST00000573600 TM6SF1Q9BZW5 370 aa34.94■■■■□ 3.18
CTDNEP1-208ENST00000573600 DDX24Q9GZR7 859 aaKnown RBP eCLIP34.94■■■■□ 3.184e-6■□□□□ 11.1
CTDNEP1-208ENST00000573600 HMG20BQ9P0W2 317 aa34.94■■■■□ 3.18
CTDNEP1-208ENST00000573600 TNS1Q9HBL0 1735 aaKnown RBP34.94■■■■□ 3.18
CTDNEP1-208ENST00000573600 TM4SF1P30408 202 aa34.93■■■■□ 3.18
CTDNEP1-208ENST00000573600 UBE4AQ14139 1066 aa34.93■■■■□ 3.18
CTDNEP1-208ENST00000573600 ZSCAN25Q6NSZ9 544 aa34.93■■■■□ 3.18
CTDNEP1-208ENST00000573600 CIZ1Q9ULV3 898 aaPredicted RBP34.92■■■■□ 3.18
CTDNEP1-208ENST00000573600 MINPP1Q9UNW1 487 aa34.92■■■■□ 3.18
CTDNEP1-208ENST00000573600 U3KPZ7 1027 aaPredicted RBP34.92■■■■□ 3.18
CTDNEP1-208ENST00000573600 CHGBP05060 677 aa34.92■■■■□ 3.18
CTDNEP1-208ENST00000573600 DDIT3P35638 169 aa34.92■■■■□ 3.18
CTDNEP1-208ENST00000573600 PI16Q6UXB8 463 aa34.91■■■■□ 3.18
CTDNEP1-208ENST00000573600 CCDC24Q8N4L8 307 aa34.91■■■■□ 3.18
CTDNEP1-208ENST00000573600 AKT1S1Q96B36 256 aa34.91■■■■□ 3.18
CTDNEP1-208ENST00000573600 UPF3BQ9BZI7 483 aaKnown RBP34.91■■■■□ 3.18
CTDNEP1-208ENST00000573600 SLC27A2O14975 620 aa34.9■■■■□ 3.18
CTDNEP1-208ENST00000573600 PRR5LQ6MZQ0 368 aa34.9■■■■□ 3.18
CTDNEP1-208ENST00000573600 CCDC129Q6ZRS4 1044 aa34.9■■■■□ 3.18
CTDNEP1-208ENST00000573600 TFCP2L1Q9NZI6 479 aa34.9■■■■□ 3.18
CTDNEP1-208ENST00000573600 CYP2E1P05181 493 aaPredicted RBP34.89■■■■□ 3.18
CTDNEP1-208ENST00000573600 ST5P78524 1137 aa34.89■■■■□ 3.18
CTDNEP1-208ENST00000573600 POTEAQ6S8J7 498 aa34.89■■■■□ 3.18
CTDNEP1-208ENST00000573600 SERPINB2P05120 415 aa34.89■■■■□ 3.18
CTDNEP1-208ENST00000573600 FLAD1Q8NFF5 587 aa34.89■■■■□ 3.18
CTDNEP1-208ENST00000573600 DSCC1Q9BVC3 393 aa34.89■■■■□ 3.18
CTDNEP1-208ENST00000573600 ANKRD2Q9GZV1 360 aa34.89■■■■□ 3.18
CTDNEP1-208ENST00000573600 SNAP23O00161 211 aa34.88■■■■□ 3.17
CTDNEP1-208ENST00000573600 TSGA10IPQ3SY00 556 aa34.88■■■■□ 3.17
CTDNEP1-208ENST00000573600 SPATA5Q8NB90 893 aa34.88■■■■□ 3.17
CTDNEP1-208ENST00000573600 MAST3O60307 1309 aa34.88■■■■□ 3.17
CTDNEP1-208ENST00000573600 PSMA5P28066 241 aa34.87■■■■□ 3.17
CTDNEP1-208ENST00000573600 NBR1Q14596 966 aa34.87■■■■□ 3.17
CTDNEP1-208ENST00000573600 APPBP2Q92624 585 aa34.87■■■■□ 3.17
CTDNEP1-208ENST00000573600 ZNF827Q17R98 1081 aa34.86■■■■□ 3.17
CTDNEP1-208ENST00000573600 CASTP20810 708 aaKnown RBP34.86■■■■□ 3.17
CTDNEP1-208ENST00000573600 JAKMIP1Q96N16 626 aaKnown RBP34.86■■■■□ 3.17
CTDNEP1-208ENST00000573600 ZSWIM6Q9HCJ5 1215 aa34.86■■■■□ 3.17
CTDNEP1-208ENST00000573600 EP400Q96L91 3159 aa34.85■■■■□ 3.17
CTDNEP1-208ENST00000573600 TTC14Q96N46 770 aa34.85■■■■□ 3.17
CTDNEP1-208ENST00000573600 BCAMP50895 628 aa34.84■■■■□ 3.17
CTDNEP1-208ENST00000573600 RASGRF1Q13972 1273 aa34.84■■■■□ 3.17
CTDNEP1-208ENST00000573600 WASHC4Q2M389 1173 aa34.84■■■■□ 3.17
CTDNEP1-208ENST00000573600 OSBP2Q969R2 916 aa34.84■■■■□ 3.17
CTDNEP1-208ENST00000573600 GNL3LQ9NVN8 582 aaKnown RBP34.84■■■■□ 3.17
CTDNEP1-208ENST00000573600 CYP46A1Q9Y6A2 500 aa34.84■■■■□ 3.17
CTDNEP1-208ENST00000573600 DOCK2Q92608 1830 aa34.84■■■■□ 3.17
CTDNEP1-208ENST00000573600 KRT32Q14532 448 aa34.84■■■■□ 3.17
CTDNEP1-208ENST00000573600 NFKBIBQ15653 356 aa34.84■■■■□ 3.17
CTDNEP1-208ENST00000573600 SLFNL1Q499Z3 407 aa34.84■■■■□ 3.17
CTDNEP1-208ENST00000573600 TMX3Q96JJ7 454 aa34.84■■■■□ 3.17
CTDNEP1-208ENST00000573600 PIH1D3Q9NQM4 214 aaKnown RBP34.84■■■■□ 3.17
CTDNEP1-208ENST00000573600 RPAP1Q9BWH6 1393 aaPredicted RBP34.83■■■■□ 3.17
CTDNEP1-208ENST00000573600 M0R2C6 588 aa34.83■■■■□ 3.17
CTDNEP1-208ENST00000573600 ADD2P35612 726 aa34.83■■■■□ 3.17
CTDNEP1-208ENST00000573600 GRAPQ13588 217 aa34.83■■■■□ 3.17
CTDNEP1-208ENST00000573600 ADCK5Q3MIX3 580 aa34.83■■■■□ 3.17
CTDNEP1-208ENST00000573600 GRAPLQ8TC17 118 aaPredicted RBP34.83■■■■□ 3.17
CTDNEP1-208ENST00000573600 ZNF804BA4D1E1 1349 aa34.82■■■■□ 3.17
CTDNEP1-208ENST00000573600 UBE3CQ15386 1083 aa34.82■■■■□ 3.16
CTDNEP1-208ENST00000573600 CAVIN4Q5BKX8 364 aa34.82■■■■□ 3.16
CTDNEP1-208ENST00000573600 NLGN1Q8N2Q7 840 aa34.82■■■■□ 3.16
CTDNEP1-208ENST00000573600 CWC22Q9HCG8 908 aaKnown RBP34.82■■■■□ 3.16
CTDNEP1-208ENST00000573600 FOXD4L1Q9NU39 408 aa34.82■■■■□ 3.16
CTDNEP1-208ENST00000573600 POLRMTO00411 1230 aaKnown RBP34.81■■■■□ 3.16
CTDNEP1-208ENST00000573600 VPS53Q5VIR6 699 aa34.81■■■■□ 3.16
CTDNEP1-208ENST00000573600 RUFY3Q7L099 469 aa34.81■■■■□ 3.16
CTDNEP1-208ENST00000573600 MYO5AQ9Y4I1 1855 aaKnown RBP34.81■■■■□ 3.16
CTDNEP1-208ENST00000573600 IDH1O75874 414 aaKnown RBP34.8■■■■□ 3.16
CTDNEP1-208ENST00000573600 HSPD1P10809 573 aaKnown RBP34.8■■■■□ 3.16
CTDNEP1-208ENST00000573600 DDR1Q08345 913 aa34.8■■■■□ 3.16
CTDNEP1-208ENST00000573600 CRY2Q49AN0 593 aa34.8■■■■□ 3.16
CTDNEP1-208ENST00000573600 SLC9C2Q5TAH2 1124 aa34.8■■■■□ 3.16
CTDNEP1-208ENST00000573600 CUL4AQ13619 759 aa34.79■■■■□ 3.16
CTDNEP1-208ENST00000573600 COL23A1Q86Y22 540 aaPredicted RBP34.79■■■■□ 3.16
CTDNEP1-208ENST00000573600 RPGRQ92834 1020 aaKnown RBP34.79■■■■□ 3.16
CTDNEP1-208ENST00000573600 MAP3K12Q12852 859 aa34.78■■■■□ 3.16
CTDNEP1-208ENST00000573600 PDRG1Q9NUG6 133 aa34.78■■■■□ 3.16
CTDNEP1-208ENST00000573600 AK2P54819 239 aa34.77■■■■□ 3.16
CTDNEP1-208ENST00000573600 BLOC1S2Q6QNY1 142 aa34.76■■■■□ 3.16
CTDNEP1-208ENST00000573600 INTS4Q96HW7 963 aaKnown RBP34.76■■■■□ 3.16
CTDNEP1-208ENST00000573600 RBM17Q96I25 401 aaKnown RBP34.76■■■■□ 3.16
CTDNEP1-208ENST00000573600 PUS7LQ9H0K6 701 aaKnown RBP34.76■■■■□ 3.16
CTDNEP1-208ENST00000573600 PDE6AP16499 860 aa34.75■■■■□ 3.15
CTDNEP1-208ENST00000573600 VPS37DQ86XT2 251 aa34.75■■■■□ 3.15
CTDNEP1-208ENST00000573600 LIMCH1Q9UPQ0 1083 aa34.75■■■■□ 3.15
CTDNEP1-208ENST00000573600 CYP21A2P08686 494 aa34.75■■■■□ 3.15
CTDNEP1-208ENST00000573600 GYG1P46976 350 aa34.75■■■■□ 3.15
CTDNEP1-208ENST00000573600 CTNNA3Q9UI47 895 aa34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms