RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 FRAT2O75474 233 aaPredicted RBP20.86■□□□□ 0.93
RPAIN-208ENST00000571043 NEK4P51957 841 aa20.86■□□□□ 0.93
RPAIN-208ENST00000571043 NMIQ13287 307 aaPredicted RBP20.86■□□□□ 0.93
RPAIN-208ENST00000571043 CELF1Q92879 486 aaKnown RBP20.86■□□□□ 0.93
RPAIN-208ENST00000571043 NEUROD6Q96NK8 337 aa20.86■□□□□ 0.93
RPAIN-208ENST00000571043 COL11A2P13942 1736 aaPredicted RBP20.86■□□□□ 0.93
RPAIN-208ENST00000571043 SRCAPQ6ZRS2 3230 aa20.85■□□□□ 0.93
RPAIN-208ENST00000571043 A0A1B0GUL7 405 aa20.85■□□□□ 0.93
RPAIN-208ENST00000571043 GRAPQ13588 217 aa20.85■□□□□ 0.93
RPAIN-208ENST00000571043 LDHAL6AQ6ZMR3 332 aa20.85■□□□□ 0.93
RPAIN-208ENST00000571043 ANKRD18AQ8IVF6 992 aa20.85■□□□□ 0.93
RPAIN-208ENST00000571043 GRAPLQ8TC17 118 aaPredicted RBP20.85■□□□□ 0.93
RPAIN-208ENST00000571043 KCNB2Q92953 911 aa20.85■□□□□ 0.93
RPAIN-208ENST00000571043 ALDH1B1P30837 517 aa20.84■□□□□ 0.93
RPAIN-208ENST00000571043 IGHMBP2P38935 993 aaKnown RBP20.84■□□□□ 0.93
RPAIN-208ENST00000571043 TIMM10P62072 90 aa20.84■□□□□ 0.93
RPAIN-208ENST00000571043 STYK1Q6J9G0 422 aa20.84■□□□□ 0.93
RPAIN-208ENST00000571043 CCDC171Q6TFL3 1326 aa20.84■□□□□ 0.93
RPAIN-208ENST00000571043 COL4A1P02462 1669 aa20.84■□□□□ 0.93
RPAIN-208ENST00000571043 BBOX1O75936 387 aa20.83■□□□□ 0.93
RPAIN-208ENST00000571043 CHRNA5P30532 468 aa20.83■□□□□ 0.93
RPAIN-208ENST00000571043 FAM227BQ96M60 508 aa20.83■□□□□ 0.93
RPAIN-208ENST00000571043 MPHOSPH8Q99549 860 aa20.83■□□□□ 0.93
RPAIN-208ENST00000571043 BSDC1Q9NW68 430 aaPredicted RBP20.83■□□□□ 0.93
RPAIN-208ENST00000571043 RIPOR2Q9Y4F9 1068 aa20.83■□□□□ 0.93
RPAIN-208ENST00000571043 SNX14Q9Y5W7 946 aa20.83■□□□□ 0.93
RPAIN-208ENST00000571043 KCNA3P22001 575 aa20.83■□□□□ 0.92
RPAIN-208ENST00000571043 ZNF622Q969S3 477 aaKnown RBP eCLIP20.83■□□□□ 0.92
RPAIN-208ENST00000571043 CWC22Q9HCG8 908 aaKnown RBP20.83■□□□□ 0.92
RPAIN-208ENST00000571043 MED23Q9ULK4 1368 aa20.82■□□□□ 0.92
RPAIN-208ENST00000571043 SPEF2Q9C093 1822 aa20.82■□□□□ 0.92
RPAIN-208ENST00000571043 DLEC1Q9Y238 1755 aa20.82■□□□□ 0.92
RPAIN-208ENST00000571043 A0A0G2JLW4 131 aa20.82■□□□□ 0.92
RPAIN-208ENST00000571043 DPEP1P16444 411 aa20.82■□□□□ 0.92
RPAIN-208ENST00000571043 PTH1RQ03431 593 aa20.82■□□□□ 0.92
RPAIN-208ENST00000571043 KBTBD3Q8NAB2 608 aa20.82■□□□□ 0.92
RPAIN-208ENST00000571043 MAP4K1Q92918 833 aa20.82■□□□□ 0.92
RPAIN-208ENST00000571043 DNAJC2Q99543 621 aaKnown RBP20.82■□□□□ 0.92
RPAIN-208ENST00000571043 KIAA1551Q9HCM1 1747 aa20.81■□□□□ 0.92
RPAIN-208ENST00000571043 A0A0D9SFI3 127 aa20.81■□□□□ 0.92
RPAIN-208ENST00000571043 CNKSR1Q969H4 720 aa20.81■□□□□ 0.92
RPAIN-208ENST00000571043 EDC3Q96F86 508 aaKnown RBP20.81■□□□□ 0.92
RPAIN-208ENST00000571043 CNNM1Q9NRU3 951 aa20.81■□□□□ 0.92
RPAIN-208ENST00000571043 PPP1R1BQ9UD71 204 aaPredicted RBP20.81■□□□□ 0.92
RPAIN-208ENST00000571043 AK9Q5TCS8 1911 aa20.8■□□□□ 0.92
RPAIN-208ENST00000571043 NECTIN1Q15223 517 aa20.8■□□□□ 0.92
RPAIN-208ENST00000571043 CCDC158Q5M9N0 1113 aa20.8■□□□□ 0.92
RPAIN-208ENST00000571043 SLX4Q8IY92 1834 aa20.79■□□□□ 0.92
RPAIN-208ENST00000571043 IFIT1P09914 478 aaKnown RBP20.79■□□□□ 0.92
RPAIN-208ENST00000571043 RAB3GAP1Q15042 981 aa20.79■□□□□ 0.92
RPAIN-208ENST00000571043 METTL24Q5JXM2 366 aa20.79■□□□□ 0.92
RPAIN-208ENST00000571043 TMC4Q7Z404 712 aa20.79■□□□□ 0.92
RPAIN-208ENST00000571043 TM6SF1Q9BZW5 370 aa20.79■□□□□ 0.92
RPAIN-208ENST00000571043 PAG1Q9NWQ8 432 aa20.79■□□□□ 0.92
RPAIN-208ENST00000571043 LRP5O75197 1615 aa20.79■□□□□ 0.92
RPAIN-208ENST00000571043 CACNA1SQ13698 1873 aa20.79■□□□□ 0.92
RPAIN-208ENST00000571043 RASEFQ8IZ41 740 aa20.78■□□□□ 0.92
RPAIN-208ENST00000571043 XAGE2Q96GT9 111 aa20.78■□□□□ 0.92
RPAIN-208ENST00000571043 TMX3Q96JJ7 454 aa20.78■□□□□ 0.92
RPAIN-208ENST00000571043 FOXD4L1Q9NU39 408 aa20.78■□□□□ 0.92
RPAIN-208ENST00000571043 MINPP1Q9UNW1 487 aa20.78■□□□□ 0.92
RPAIN-208ENST00000571043 CUL4AQ13619 759 aa20.78■□□□□ 0.92
RPAIN-208ENST00000571043 KLHL34Q8N239 644 aa20.78■□□□□ 0.92
RPAIN-208ENST00000571043 RBM8AQ9Y5S9 174 aaKnown RBP20.78■□□□□ 0.92
RPAIN-208ENST00000571043 GOLGB1Q14789 3259 aaKnown RBP20.78■□□□□ 0.92
RPAIN-208ENST00000571043 BRCA1P38398 1863 aaKnown RBP20.77■□□□□ 0.92
RPAIN-208ENST00000571043 MROH5Q6ZUA9 1318 aa20.77■□□□□ 0.92
RPAIN-208ENST00000571043 ZKSCAN1P17029 563 aaPredicted RBP20.77■□□□□ 0.92
RPAIN-208ENST00000571043 ATP2B3Q16720 1220 aa20.77■□□□□ 0.92
RPAIN-208ENST00000571043 TTC39AQ5SRH9 613 aa20.77■□□□□ 0.92
RPAIN-208ENST00000571043 GORABQ5T7V8 394 aa20.77■□□□□ 0.92
RPAIN-208ENST00000571043 PRPF40BQ6NWY9 871 aaKnown RBP20.77■□□□□ 0.92
RPAIN-208ENST00000571043 SP8Q8IXZ3 490 aa20.77■□□□□ 0.92
RPAIN-208ENST00000571043 TTLL6Q8N841 843 aa20.77■□□□□ 0.92
RPAIN-208ENST00000571043 VGLL2Q8N8G2 317 aa20.77■□□□□ 0.92
RPAIN-208ENST00000571043 UPF3BQ9BZI7 483 aaKnown RBP20.77■□□□□ 0.92
RPAIN-208ENST00000571043 PIM2Q9P1W9 311 aa20.77■□□□□ 0.92
RPAIN-208ENST00000571043 GOLIM4O00461 696 aa20.76■□□□□ 0.91
RPAIN-208ENST00000571043 MCM4P33991 863 aa20.76■□□□□ 0.91
RPAIN-208ENST00000571043 CHRNDQ07001 517 aa20.76■□□□□ 0.91
RPAIN-208ENST00000571043 MCMDC2Q4G0Z9 681 aa20.76■□□□□ 0.91
RPAIN-208ENST00000571043 RNF20Q5VTR2 975 aa20.76■□□□□ 0.91
RPAIN-208ENST00000571043 FHDC1Q9C0D6 1143 aaPredicted RBP20.76■□□□□ 0.91
RPAIN-208ENST00000571043 HELLSQ9NRZ9 838 aa20.76■□□□□ 0.91
RPAIN-208ENST00000571043 ATP6V0A2Q9Y487 856 aa20.76■□□□□ 0.91
RPAIN-208ENST00000571043 PPEF1O14829 653 aaPredicted RBP20.75■□□□□ 0.91
RPAIN-208ENST00000571043 TAF5LO75529 589 aa20.75■□□□□ 0.91
RPAIN-208ENST00000571043 PDE8BO95263 885 aa20.75■□□□□ 0.91
RPAIN-208ENST00000571043 KCNJ4P48050 445 aa20.75■□□□□ 0.91
RPAIN-208ENST00000571043 NUCB2P80303 420 aa20.75■□□□□ 0.91
RPAIN-208ENST00000571043 LRRFIP1Q32MZ4 808 aaKnown RBP20.75■□□□□ 0.91
RPAIN-208ENST00000571043 CREB3L3Q68CJ9 461 aa20.75■□□□□ 0.91
RPAIN-208ENST00000571043 ZNF589Q86UQ0 364 aaPredicted RBP20.75■□□□□ 0.91
RPAIN-208ENST00000571043 C7orf43Q8WVR3 580 aa20.75■□□□□ 0.91
RPAIN-208ENST00000571043 INTS4Q96HW7 963 aaKnown RBP20.75■□□□□ 0.91
RPAIN-208ENST00000571043 ZNF512BQ96KM6 892 aaPredicted RBP20.75■□□□□ 0.91
RPAIN-208ENST00000571043 TTC14Q96N46 770 aa20.75■□□□□ 0.91
RPAIN-208ENST00000571043 NDUFB9Q9Y6M9 179 aa20.75■□□□□ 0.91
RPAIN-208ENST00000571043 ADORA1P30542 326 aa20.74■□□□□ 0.91
RPAIN-208ENST00000571043 NLGN2Q8NFZ4 835 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms