RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 C21orf2O43822 256 aa23.43■■□□□ 1.34
SPNS2-203ENST00000570979 TFCP2Q12800 502 aa23.43■■□□□ 1.34
SPNS2-203ENST00000570979 TPTE2Q6XPS3 522 aa23.43■■□□□ 1.34
SPNS2-203ENST00000570979 ZSCAN31Q96LW9 406 aaPredicted RBP23.43■■□□□ 1.34
SPNS2-203ENST00000570979 PLA2G12BQ9BX93 195 aa23.43■■□□□ 1.34
SPNS2-203ENST00000570979 BRPF3Q9ULD4 1205 aa23.43■■□□□ 1.34
SPNS2-203ENST00000570979 CACNA1SQ13698 1873 aa23.43■■□□□ 1.34
SPNS2-203ENST00000570979 PCCAP05165 728 aaPredicted RBP23.42■■□□□ 1.34
SPNS2-203ENST00000570979 LRRFIP1Q32MZ4 808 aaKnown RBP23.42■■□□□ 1.34
SPNS2-203ENST00000570979 CCDC171Q6TFL3 1326 aa23.42■■□□□ 1.34
SPNS2-203ENST00000570979 UBN2Q6ZU65 1347 aa23.42■■□□□ 1.34
SPNS2-203ENST00000570979 BAG4O95429 457 aaKnown RBP23.42■■□□□ 1.34
SPNS2-203ENST00000570979 GPTP24298 496 aa23.42■■□□□ 1.34
SPNS2-203ENST00000570979 STYK1Q6J9G0 422 aa23.42■■□□□ 1.34
SPNS2-203ENST00000570979 BOLA2Q9H3K6 86 aa23.42■■□□□ 1.34
SPNS2-203ENST00000570979 NMRK2Q9NPI5 230 aa23.42■■□□□ 1.34
SPNS2-203ENST00000570979 HMG20BQ9P0W2 317 aa23.42■■□□□ 1.34
SPNS2-203ENST00000570979 CHMP3Q9Y3E7 222 aa23.42■■□□□ 1.34
SPNS2-203ENST00000570979 CCDC88AQ3V6T2 1871 aa23.42■■□□□ 1.34
SPNS2-203ENST00000570979 KLRG2A4D1S0 409 aaPredicted RBP23.41■■□□□ 1.34
SPNS2-203ENST00000570979 KCNJ4P48050 445 aa23.41■■□□□ 1.34
SPNS2-203ENST00000570979 MASTLQ96GX5 879 aa23.41■■□□□ 1.34
SPNS2-203ENST00000570979 AKAP2Q9Y2D5 859 aa23.41■■□□□ 1.34
SPNS2-203ENST00000570979 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.41■■□□□ 1.34
SPNS2-203ENST00000570979 ABCC12Q96J65 1359 aa23.41■■□□□ 1.34
SPNS2-203ENST00000570979 EYA2O00167 538 aa23.4■■□□□ 1.34
SPNS2-203ENST00000570979 CCDC57Q2TAC2 916 aa23.4■■□□□ 1.34
SPNS2-203ENST00000570979 VPS53Q5VIR6 699 aa23.4■■□□□ 1.34
SPNS2-203ENST00000570979 PRPF40BQ6NWY9 871 aaKnown RBP23.4■■□□□ 1.34
SPNS2-203ENST00000570979 KLHDC4Q8TBB5 520 aa23.4■■□□□ 1.34
SPNS2-203ENST00000570979 MAP4K1Q92918 833 aa23.4■■□□□ 1.34
SPNS2-203ENST00000570979 LIMCH1Q9UPQ0 1083 aa23.4■■□□□ 1.34
SPNS2-203ENST00000570979 TNRC6CQ9HCJ0 1690 aaKnown RBP23.4■■□□□ 1.34
SPNS2-203ENST00000570979 GIGYF2Q6Y7W6 1299 aaKnown RBP23.4■■□□□ 1.34
SPNS2-203ENST00000570979 ZNF34Q8IZ26 560 aa23.4■■□□□ 1.34
SPNS2-203ENST00000570979 CNKSR1Q969H4 720 aa23.4■■□□□ 1.34
SPNS2-203ENST00000570979 HAUS7Q99871 368 aa23.4■■□□□ 1.34
SPNS2-203ENST00000570979 CYP46A1Q9Y6A2 500 aa23.4■■□□□ 1.34
SPNS2-203ENST00000570979 CDHR2Q9BYE9 1310 aa23.39■■□□□ 1.33
SPNS2-203ENST00000570979 GOLGA6L3A6NEY3 463 aa23.39■■□□□ 1.33
SPNS2-203ENST00000570979 LMNB1P20700 586 aa23.39■■□□□ 1.33
SPNS2-203ENST00000570979 ZBTB38Q8NAP3 1195 aaPredicted RBP23.39■■□□□ 1.33
SPNS2-203ENST00000570979 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.39■■□□□ 1.33
SPNS2-203ENST00000570979 SH2B1Q9NRF2 756 aaPredicted RBP23.39■■□□□ 1.33
SPNS2-203ENST00000570979 FER1L6Q2WGJ9 1857 aa23.39■■□□□ 1.33
SPNS2-203ENST00000570979 NMIQ13287 307 aaPredicted RBP23.38■■□□□ 1.33
SPNS2-203ENST00000570979 KRT32Q14532 448 aa23.38■■□□□ 1.33
SPNS2-203ENST00000570979 NECTIN1Q15223 517 aa23.38■■□□□ 1.33
SPNS2-203ENST00000570979 ERFEQ4G0M1 354 aa23.38■■□□□ 1.33
SPNS2-203ENST00000570979 SUSD4Q5VX71 490 aa23.38■■□□□ 1.33
SPNS2-203ENST00000570979 PKNOX2Q96KN3 472 aa23.38■■□□□ 1.33
SPNS2-203ENST00000570979 DBNLQ9UJU6 430 aaKnown RBP23.38■■□□□ 1.33
SPNS2-203ENST00000570979 ANKRD1Q15327 319 aa23.37■■□□□ 1.33
SPNS2-203ENST00000570979 IL25Q9H293 177 aa23.37■■□□□ 1.33
SPNS2-203ENST00000570979 CEP126Q9P2H0 1117 aa23.37■■□□□ 1.33
SPNS2-203ENST00000570979 TTC14Q96N46 770 aa23.37■■□□□ 1.33
SPNS2-203ENST00000570979 UPF3BQ9BZI7 483 aaKnown RBP23.37■■□□□ 1.33
SPNS2-203ENST00000570979 ZSWIM6Q9HCJ5 1215 aa23.37■■□□□ 1.33
SPNS2-203ENST00000570979 TLR7Q9NYK1 1049 aaKnown RBP23.37■■□□□ 1.33
SPNS2-203ENST00000570979 NPR1P16066 1061 aa23.36■■□□□ 1.33
SPNS2-203ENST00000570979 GTF2E1P29083 439 aaPredicted RBP23.36■■□□□ 1.33
SPNS2-203ENST00000570979 KLHL40Q2TBA0 621 aa23.36■■□□□ 1.33
SPNS2-203ENST00000570979 TSGA10IPQ3SY00 556 aa23.36■■□□□ 1.33
SPNS2-203ENST00000570979 C7orf43Q8WVR3 580 aa23.36■■□□□ 1.33
SPNS2-203ENST00000570979 JARID2Q92833 1246 aaPredicted RBP23.36■■□□□ 1.33
SPNS2-203ENST00000570979 ATG9AQ7Z3C6 839 aa23.35■■□□□ 1.33
SPNS2-203ENST00000570979 ZGPATQ8N5A5 531 aaKnown RBP23.35■■□□□ 1.33
SPNS2-203ENST00000570979 NYXQ9GZU5 481 aa23.35■■□□□ 1.33
SPNS2-203ENST00000570979 ALDH8A1Q9H2A2 487 aaPredicted RBP23.35■■□□□ 1.33
SPNS2-203ENST00000570979 WDR33Q9C0J8 1336 aaKnown RBP23.35■■□□□ 1.33
SPNS2-203ENST00000570979 NTSR2O95665 410 aa23.35■■□□□ 1.33
SPNS2-203ENST00000570979 HSP90B1P14625 803 aaKnown RBP23.35■■□□□ 1.33
SPNS2-203ENST00000570979 OLFM4Q6UX06 510 aa23.35■■□□□ 1.33
SPNS2-203ENST00000570979 RBM8AQ9Y5S9 174 aaKnown RBP23.35■■□□□ 1.33
SPNS2-203ENST00000570979 MED23Q9ULK4 1368 aa23.34■■□□□ 1.33
SPNS2-203ENST00000570979 CASTP20810 708 aaKnown RBP23.34■■□□□ 1.33
SPNS2-203ENST00000570979 PDRG1Q9NUG6 133 aa23.34■■□□□ 1.33
SPNS2-203ENST00000570979 CSF1RP07333 972 aa23.33■■□□□ 1.33
SPNS2-203ENST00000570979 PTH1RQ03431 593 aa23.33■■□□□ 1.33
SPNS2-203ENST00000570979 CREB3L3Q68CJ9 461 aa23.33■■□□□ 1.33
SPNS2-203ENST00000570979 RUFY3Q7L099 469 aa23.33■■□□□ 1.33
SPNS2-203ENST00000570979 KBTBD3Q8NAB2 608 aa23.33■■□□□ 1.33
SPNS2-203ENST00000570979 U3KPZ7 1027 aaPredicted RBP23.33■■□□□ 1.33
SPNS2-203ENST00000570979 SPEF2Q9C093 1822 aa23.33■■□□□ 1.32
SPNS2-203ENST00000570979 BRD1O95696 1058 aa23.32■■□□□ 1.32
SPNS2-203ENST00000570979 MRE11P49959 708 aa23.32■■□□□ 1.32
SPNS2-203ENST00000570979 IFIT5Q13325 482 aaKnown RBP23.32■■□□□ 1.32
SPNS2-203ENST00000570979 TAF7LQ5H9L4 462 aa23.32■■□□□ 1.32
SPNS2-203ENST00000570979 TIAM2Q8IVF5 1701 aa23.32■■□□□ 1.32
SPNS2-203ENST00000570979 RASEFQ8IZ41 740 aa23.32■■□□□ 1.32
SPNS2-203ENST00000570979 JAKMIP1Q96N16 626 aaKnown RBP23.32■■□□□ 1.32
SPNS2-203ENST00000570979 NEUROD6Q96NK8 337 aa23.32■■□□□ 1.32
SPNS2-203ENST00000570979 DBNDD2Q9BQY9 259 aa23.32■■□□□ 1.32
SPNS2-203ENST00000570979 HELLSQ9NRZ9 838 aa23.32■■□□□ 1.32
SPNS2-203ENST00000570979 CRY2Q49AN0 593 aa23.32■■□□□ 1.32
SPNS2-203ENST00000570979 MCMDC2Q4G0Z9 681 aa23.32■■□□□ 1.32
SPNS2-203ENST00000570979 CCDC158Q5M9N0 1113 aa23.32■■□□□ 1.32
SPNS2-203ENST00000570979 C3orf67Q6ZVT6 689 aa23.32■■□□□ 1.32
SPNS2-203ENST00000570979 FAM227BQ96M60 508 aa23.32■■□□□ 1.32
SPNS2-203ENST00000570979 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms