RNA–Protein interactions for RNA: ENST00000570977.1

TOM1L1-208, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-208ENST00000570977 RTCBQ9Y3I0 505 aaKnown RBP8.12□□□□□ -1.11
TOM1L1-208ENST00000570977 PARP3Q9Y6F1 533 aa8.12□□□□□ -1.11
TOM1L1-208ENST00000570977 N4BP2Q86UW6 1770 aaPredicted RBP8.12□□□□□ -1.11
TOM1L1-208ENST00000570977 MAGEB6P1A0A0J9YX57 407 aa8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 SETQ01105 290 aaPredicted RBP8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 C4orf48Q5BLP8 95 aa8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 FOXD4L5Q5VV16 416 aaPredicted RBP8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 USHBP1Q8N6Y0 703 aa8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 ARMC2Q8NEN0 867 aa8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 TMC1Q8TDI8 760 aa8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 FOXD4L4Q8WXT5 416 aaPredicted RBP8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 HPS1Q92902 700 aa8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 COG3Q96JB2 828 aa8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 CARD14Q9BXL6 1004 aa8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 BRPF3Q9ULD4 1205 aa8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 ASAP1Q9ULH1 1129 aa8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 WASF2Q9Y6W5 498 aa8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 TNRC6CQ9HCJ0 1690 aaKnown RBP8.11□□□□□ -1.11
TOM1L1-208ENST00000570977 RTL1A6NKG5 1358 aa8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 MAP2P11137 1827 aaKnown RBP8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 RPS6KA4O75676 772 aa8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 NCLP19338 710 aaKnown RBP8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 LMNB1P20700 586 aa8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 VARSP26640 1264 aaKnown RBP8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 MLLT1Q03111 559 aaPredicted RBP8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 ARID5BQ14865 1188 aa8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 L3MBTL2Q969R5 705 aa8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 ZNF428Q96B54 188 aa8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 AAASQ9NRG9 546 aa8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 ATG3Q9NT62 314 aa8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 MKRN1Q9UHC7 482 aaKnown RBP8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 BRCA1P38398 1863 aaKnown RBP8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 ARFGEF1Q9Y6D6 1849 aa8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 A0A1W2PP64 1363 aa8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 CNTNAP1P78357 1384 aa8.1□□□□□ -1.11
TOM1L1-208ENST00000570977 RFC4P35249 363 aa8.09□□□□□ -1.11
TOM1L1-208ENST00000570977 MCM6Q14566 821 aa8.09□□□□□ -1.11
TOM1L1-208ENST00000570977 BPHLQ86WA6 291 aaPredicted RBP8.09□□□□□ -1.11
TOM1L1-208ENST00000570977 AEBP1Q8IUX7 1158 aa8.09□□□□□ -1.11
TOM1L1-208ENST00000570977 CCDC82Q8N4S0 544 aa8.09□□□□□ -1.11
TOM1L1-208ENST00000570977 FAM174AQ8TBP5 190 aa8.09□□□□□ -1.11
TOM1L1-208ENST00000570977 SLC4A9Q96Q91 983 aa8.09□□□□□ -1.11
TOM1L1-208ENST00000570977 FKBPLQ9UIM3 349 aa8.09□□□□□ -1.11
TOM1L1-208ENST00000570977 PKD1L3Q7Z443 1732 aa8.09□□□□□ -1.11
TOM1L1-208ENST00000570977 CNTNAP4Q9C0A0 1308 aa8.08□□□□□ -1.12
TOM1L1-208ENST00000570977 AXIN1O15169 862 aa8.08□□□□□ -1.12
TOM1L1-208ENST00000570977 AVPP01185 164 aa8.08□□□□□ -1.12
TOM1L1-208ENST00000570977 TM4SF1P30408 202 aa8.08□□□□□ -1.12
TOM1L1-208ENST00000570977 CHRNA5P30532 468 aa8.08□□□□□ -1.12
TOM1L1-208ENST00000570977 LBX1P52954 281 aa8.08□□□□□ -1.12
TOM1L1-208ENST00000570977 RRS1Q15050 365 aaKnown RBP8.08□□□□□ -1.12
TOM1L1-208ENST00000570977 AIDAQ96BJ3 306 aa8.08□□□□□ -1.12
TOM1L1-208ENST00000570977 CCDC136Q96JN2 1154 aa8.08□□□□□ -1.12
TOM1L1-208ENST00000570977 TMOD3Q9NYL9 352 aa8.08□□□□□ -1.12
TOM1L1-208ENST00000570977 DACH1Q9UI36 760 aa8.08□□□□□ -1.12
TOM1L1-208ENST00000570977 INSRP06213 1382 aa8.08□□□□□ -1.12
TOM1L1-208ENST00000570977 PASKQ96RG2 1323 aa8.07□□□□□ -1.12
TOM1L1-208ENST00000570977 SBF1O95248 1867 aa8.07□□□□□ -1.12
TOM1L1-208ENST00000570977 C4AP0C0L4 1744 aa8.07□□□□□ -1.12
TOM1L1-208ENST00000570977 CANXP27824 592 aaKnown RBP8.07□□□□□ -1.12
TOM1L1-208ENST00000570977 VEGFBP49765 207 aa8.07□□□□□ -1.12
TOM1L1-208ENST00000570977 RASSF7Q02833 373 aa8.07□□□□□ -1.12
TOM1L1-208ENST00000570977 DDR1Q08345 913 aa8.07□□□□□ -1.12
TOM1L1-208ENST00000570977 HSP90AB2PQ58FF8 381 aa8.07□□□□□ -1.12
TOM1L1-208ENST00000570977 SH3BP5LQ7L8J4 393 aa8.07□□□□□ -1.12
TOM1L1-208ENST00000570977 SPG7Q9UQ90 795 aa8.07□□□□□ -1.12
TOM1L1-208ENST00000570977 ROCK2O75116 1388 aaKnown RBP8.07□□□□□ -1.12
TOM1L1-208ENST00000570977 KDRP35968 1356 aa8.07□□□□□ -1.12
TOM1L1-208ENST00000570977 CLSPNQ9HAW4 1339 aa8.06□□□□□ -1.12
TOM1L1-208ENST00000570977 SMG6Q86US8 1419 aaKnown RBP8.06□□□□□ -1.12
TOM1L1-208ENST00000570977 POLRMTO00411 1230 aaKnown RBP8.06□□□□□ -1.12
TOM1L1-208ENST00000570977 HSPA8P11142 646 aaKnown RBP8.06□□□□□ -1.12
TOM1L1-208ENST00000570977 PTMSP20962 102 aa8.06□□□□□ -1.12
TOM1L1-208ENST00000570977 AAMPQ13685 434 aa8.06□□□□□ -1.12
TOM1L1-208ENST00000570977 TMEM259Q4ZIN3 620 aa8.06□□□□□ -1.12
TOM1L1-208ENST00000570977 RGPD2P0DJD1 1756 aa8.06□□□□□ -1.12
TOM1L1-208ENST00000570977 KIF24Q5T7B8 1368 aa8.06□□□□□ -1.12
TOM1L1-208ENST00000570977 ITGB4P16144 1822 aa8.06□□□□□ -1.12
TOM1L1-208ENST00000570977 NCAPD2Q15021 1401 aa8.05□□□□□ -1.12
TOM1L1-208ENST00000570977 FYB1O15117 783 aa8.05□□□□□ -1.12
TOM1L1-208ENST00000570977 NNTQ13423 1086 aa8.05□□□□□ -1.12
TOM1L1-208ENST00000570977 CTC1Q2NKJ3 1217 aa8.05□□□□□ -1.12
TOM1L1-208ENST00000570977 ZNF787Q6DD87 383 aa8.05□□□□□ -1.12
TOM1L1-208ENST00000570977 SH3RF1Q7Z6J0 888 aa8.05□□□□□ -1.12
TOM1L1-208ENST00000570977 IFNL2Q8IZJ0 200 aa8.05□□□□□ -1.12
TOM1L1-208ENST00000570977 ARHGAP9Q9BRR9 750 aa8.05□□□□□ -1.12
TOM1L1-208ENST00000570977 TONSLQ96HA7 1378 aa8.05□□□□□ -1.12
TOM1L1-208ENST00000570977 USP42Q9H9J4 1324 aaKnown RBP8.04□□□□□ -1.12
TOM1L1-208ENST00000570977 A0A0U1RQG5 324 aaPredicted RBP8.04□□□□□ -1.12
TOM1L1-208ENST00000570977 TMEM88BA6NKF7 163 aa8.04□□□□□ -1.12
TOM1L1-208ENST00000570977 ERVV-2B6SEH9 535 aa8.04□□□□□ -1.12
TOM1L1-208ENST00000570977 NFKBIEO00221 500 aa8.04□□□□□ -1.12
TOM1L1-208ENST00000570977 PHKG2P15735 406 aa8.04□□□□□ -1.12
TOM1L1-208ENST00000570977 MAP2K1Q02750 393 aaPredicted RBP8.04□□□□□ -1.12
TOM1L1-208ENST00000570977 CRIPAKQ8N1N5 446 aa8.04□□□□□ -1.12
TOM1L1-208ENST00000570977 TTLL6Q8N841 843 aa8.04□□□□□ -1.12
TOM1L1-208ENST00000570977 GPKOWQ92917 476 aaPredicted RBP eCLIP8.04□□□□□ -1.12
TOM1L1-208ENST00000570977 TRIM34Q9BYJ4 488 aa8.04□□□□□ -1.12
TOM1L1-208ENST00000570977 FLT4P35916 1363 aa8.03□□□□□ -1.12
TOM1L1-208ENST00000570977 RASSF10A6NK89 507 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms