RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 ABL1P00519 1130 aa8.71□□□□□ -1.02
UBFD1-209ENST00000569919 CCDC27Q2M243 656 aa8.71□□□□□ -1.02
UBFD1-209ENST00000569919 MPHOSPH9Q99550 1183 aa8.71□□□□□ -1.02
UBFD1-209ENST00000569919 FHDC1Q9C0D6 1143 aaPredicted RBP8.71□□□□□ -1.02
UBFD1-209ENST00000569919 TRAK1Q9UPV9 953 aa8.71□□□□□ -1.02
UBFD1-209ENST00000569919 PRR36Q9H6K5 1346 aa8.71□□□□□ -1.02
UBFD1-209ENST00000569919 SSH2Q76I76 1423 aa8.71□□□□□ -1.02
UBFD1-209ENST00000569919 CDK2AP1O14519 115 aa8.7□□□□□ -1.02
UBFD1-209ENST00000569919 CENPCQ03188 943 aa8.7□□□□□ -1.02
UBFD1-209ENST00000569919 NAA30Q147X3 362 aaPredicted RBP8.7□□□□□ -1.02
UBFD1-209ENST00000569919 GTF3C2Q8WUA4 911 aaPredicted RBP8.7□□□□□ -1.02
UBFD1-209ENST00000569919 COL26A1Q96A83 441 aa8.7□□□□□ -1.02
UBFD1-209ENST00000569919 NLRP3Q96P20 1036 aa8.7□□□□□ -1.02
UBFD1-209ENST00000569919 STK32BQ9NY57 414 aa8.7□□□□□ -1.02
UBFD1-209ENST00000569919 USP3Q9Y6I4 520 aa8.7□□□□□ -1.02
UBFD1-209ENST00000569919 DLC1Q96QB1 1528 aa8.7□□□□□ -1.02
UBFD1-209ENST00000569919 CAMTA1Q9Y6Y1 1673 aa8.69□□□□□ -1.02
UBFD1-209ENST00000569919 SLC15A2Q16348 729 aa8.69□□□□□ -1.02
UBFD1-209ENST00000569919 DDB1Q16531 1140 aa8.69□□□□□ -1.02
UBFD1-209ENST00000569919 NUTM2GQ5VZR2 741 aa8.69□□□□□ -1.02
UBFD1-209ENST00000569919 NLRP13Q86W25 1043 aa8.69□□□□□ -1.02
UBFD1-209ENST00000569919 MEIOBQ8N635 442 aa8.69□□□□□ -1.02
UBFD1-209ENST00000569919 ABTB2Q8N961 1025 aa8.69□□□□□ -1.02
UBFD1-209ENST00000569919 VTI1AQ96AJ9 217 aa8.69□□□□□ -1.02
UBFD1-209ENST00000569919 NUDT16Q96DE0 195 aaKnown RBP8.69□□□□□ -1.02
UBFD1-209ENST00000569919 PDGFDQ9GZP0 370 aaPredicted RBP8.69□□□□□ -1.02
UBFD1-209ENST00000569919 MTFR1LQ9H019 292 aa8.69□□□□□ -1.02
UBFD1-209ENST00000569919 ANO2Q9NQ90 1003 aa8.69□□□□□ -1.02
UBFD1-209ENST00000569919 IQSEC3Q9UPP2 1182 aaPredicted RBP8.69□□□□□ -1.02
UBFD1-209ENST00000569919 CHD4Q14839 1912 aa8.68□□□□□ -1.02
UBFD1-209ENST00000569919 PSMA6P60900 246 aaKnown RBP8.68□□□□□ -1.02
UBFD1-209ENST00000569919 ZNF211Q13398 564 aaPredicted RBP8.68□□□□□ -1.02
UBFD1-209ENST00000569919 GPR162Q16538 588 aa8.68□□□□□ -1.02
UBFD1-209ENST00000569919 RGS22Q8NE09 1264 aa8.68□□□□□ -1.02
UBFD1-209ENST00000569919 C2orf49Q9BVC5 232 aaPredicted RBP8.68□□□□□ -1.02
UBFD1-209ENST00000569919 EGFL7Q9UHF1 273 aa8.68□□□□□ -1.02
UBFD1-209ENST00000569919 PDZRN3Q9UPQ7 1066 aa8.68□□□□□ -1.02
UBFD1-209ENST00000569919 DNMT3AQ9Y6K1 912 aaPredicted RBP8.68□□□□□ -1.02
UBFD1-209ENST00000569919 CPDO75976 1380 aa8.68□□□□□ -1.02
UBFD1-209ENST00000569919 OVOS2A0A0G2JMS6 1433 aa8.68□□□□□ -1.02
UBFD1-209ENST00000569919 OVOS2A0A0J9YW53 1432 aa8.68□□□□□ -1.02
UBFD1-209ENST00000569919 OVOS2Q6IE36 1432 aa8.68□□□□□ -1.02
UBFD1-209ENST00000569919 CAPN5O15484 640 aaPredicted RBP8.67□□□□□ -1.02
UBFD1-209ENST00000569919 GCP02774 474 aa8.67□□□□□ -1.02
UBFD1-209ENST00000569919 TXNRD1Q16881 649 aa8.67□□□□□ -1.02
UBFD1-209ENST00000569919 STAG2Q8N3U4 1231 aa8.67□□□□□ -1.02
UBFD1-209ENST00000569919 TULP4Q9NRJ4 1543 aa8.67□□□□□ -1.02
UBFD1-209ENST00000569919 CRYBG1Q9Y4K1 1723 aa8.66□□□□□ -1.02
UBFD1-209ENST00000569919 ATP7BP35670 1465 aa8.66□□□□□ -1.02
UBFD1-209ENST00000569919 ACEP12821 1306 aa8.66□□□□□ -1.02
UBFD1-209ENST00000569919 ICMTO60725 284 aa8.66□□□□□ -1.02
UBFD1-209ENST00000569919 RGS20O76081 388 aa8.66□□□□□ -1.02
UBFD1-209ENST00000569919 NBPF15Q8N660 670 aa8.66□□□□□ -1.02
UBFD1-209ENST00000569919 ZSCAN10Q96SZ4 725 aaPredicted RBP8.66□□□□□ -1.02
UBFD1-209ENST00000569919 TSEN34Q9BSV6 310 aaKnown RBP8.66□□□□□ -1.02
UBFD1-209ENST00000569919 CDK19Q9BWU1 502 aa8.66□□□□□ -1.02
UBFD1-209ENST00000569919 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.66□□□□□ -1.02
UBFD1-209ENST00000569919 BIN2Q9UBW5 565 aaPredicted RBP8.66□□□□□ -1.02
UBFD1-209ENST00000569919 NRKQ7Z2Y5 1582 aa8.65□□□□□ -1.02
UBFD1-209ENST00000569919 CRB1P82279 1406 aa8.65□□□□□ -1.02
UBFD1-209ENST00000569919 H3BRB1 525 aa8.65□□□□□ -1.02
UBFD1-209ENST00000569919 FKBP4Q02790 459 aaKnown RBP eCLIP8.65□□□□□ -1.02
UBFD1-209ENST00000569919 MTMR3Q13615 1198 aa8.65□□□□□ -1.02
UBFD1-209ENST00000569919 TOM1L2Q6ZVM7 507 aa8.65□□□□□ -1.02
UBFD1-209ENST00000569919 PTF1AQ7RTS3 328 aa8.65□□□□□ -1.02
UBFD1-209ENST00000569919 TUT1Q9H6E5 874 aaKnown RBP8.65□□□□□ -1.02
UBFD1-209ENST00000569919 CABP1Q9NZU7 370 aa8.65□□□□□ -1.02
UBFD1-209ENST00000569919 CHMP3Q9Y3E7 222 aa8.65□□□□□ -1.02
UBFD1-209ENST00000569919 BCL9O00512 1426 aa8.64□□□□□ -1.03
UBFD1-209ENST00000569919 POLR3AO14802 1390 aaPredicted RBP8.64□□□□□ -1.03
UBFD1-209ENST00000569919 RGPD3A6NKT7 1758 aaPredicted RBP8.64□□□□□ -1.03
UBFD1-209ENST00000569919 RGPD4Q7Z3J3 1758 aa8.64□□□□□ -1.03
UBFD1-209ENST00000569919 CASZ1Q86V15 1759 aa8.64□□□□□ -1.03
UBFD1-209ENST00000569919 SERTM1A2A2V5 107 aa8.64□□□□□ -1.03
UBFD1-209ENST00000569919 EXOC5O00471 708 aa8.64□□□□□ -1.03
UBFD1-209ENST00000569919 TEAD4Q15561 434 aa8.64□□□□□ -1.03
UBFD1-209ENST00000569919 GLYCTKQ8IVS8 523 aa8.64□□□□□ -1.03
UBFD1-209ENST00000569919 ZNF295-AS1Q8N0V1 137 aa8.64□□□□□ -1.03
UBFD1-209ENST00000569919 LINC00528Q8N1L1 170 aa8.64□□□□□ -1.03
UBFD1-209ENST00000569919 MARCH10Q8NA82 808 aaPredicted RBP8.64□□□□□ -1.03
UBFD1-209ENST00000569919 ZDHHC1Q8WTX9 485 aa8.64□□□□□ -1.03
UBFD1-209ENST00000569919 INSM2Q96T92 566 aaPredicted RBP8.64□□□□□ -1.03
UBFD1-209ENST00000569919 SAP130Q9H0E3 1048 aa8.64□□□□□ -1.03
UBFD1-209ENST00000569919 PARP4Q9UKK3 1724 aaKnown RBP8.63□□□□□ -1.03
UBFD1-209ENST00000569919 MAP3K5Q99683 1374 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 USP19O94966 1318 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 EML1O00423 815 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 SPINT1O43278 529 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 UPP2O95045 317 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 GPC1P35052 558 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 NOS2P35228 1153 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 SLC27A3Q5K4L6 730 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 SH3PXD2AQ5TCZ1 1133 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 TMEM214Q6NUQ4 689 aaKnown RBP8.63□□□□□ -1.03
UBFD1-209ENST00000569919 C16orf46Q6P387 395 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 HELQQ8TDG4 1101 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 GRIP2Q9C0E4 1043 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 ZNF232Q9UNY5 417 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 PARP3Q9Y6F1 533 aa8.63□□□□□ -1.03
UBFD1-209ENST00000569919 AATKQ6ZMQ8 1374 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms