RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 MYH3P11055 1940 aa11.76□□□□□ -0.53
UBR1-210ENST00000569337 ITGBL1O95965 494 aaPredicted RBP11.75□□□□□ -0.53
UBR1-210ENST00000569337 VIL1P09327 827 aaKnown RBP11.75□□□□□ -0.53
UBR1-210ENST00000569337 RPS12P25398 132 aaKnown RBP11.75□□□□□ -0.53
UBR1-210ENST00000569337 MICALL2Q8IY33 904 aa11.75□□□□□ -0.53
UBR1-210ENST00000569337 CNNM1Q9NRU3 951 aa11.75□□□□□ -0.53
UBR1-210ENST00000569337 ZNF804BA4D1E1 1349 aa11.75□□□□□ -0.53
UBR1-210ENST00000569337 SCN4AP35499 1836 aa11.74□□□□□ -0.53
UBR1-210ENST00000569337 HELBQ8NG08 1087 aaPredicted RBP11.74□□□□□ -0.53
UBR1-210ENST00000569337 KLRG1Q96E93 195 aa11.74□□□□□ -0.53
UBR1-210ENST00000569337 KAZALD1Q96I82 304 aa11.74□□□□□ -0.53
UBR1-210ENST00000569337 ZNF594Q96JF6 807 aaPredicted RBP11.74□□□□□ -0.53
UBR1-210ENST00000569337 COA1Q9GZY4 146 aa11.74□□□□□ -0.53
UBR1-210ENST00000569337 BICC1Q9H694 974 aaKnown RBP11.74□□□□□ -0.53
UBR1-210ENST00000569337 CREBZFQ9NS37 354 aa11.74□□□□□ -0.53
UBR1-210ENST00000569337 ZBTB40Q9NUA8 1239 aa11.74□□□□□ -0.53
UBR1-210ENST00000569337 PASKQ96RG2 1323 aa11.74□□□□□ -0.53
UBR1-210ENST00000569337 MED23Q9ULK4 1368 aa11.74□□□□□ -0.53
UBR1-210ENST00000569337 SHTN1A0MZ66 631 aa11.73□□□□□ -0.53
UBR1-210ENST00000569337 USP17L3A6NCW0 530 aa11.73□□□□□ -0.53
UBR1-210ENST00000569337 USP17L4A6NCW7 530 aa11.73□□□□□ -0.53
UBR1-210ENST00000569337 TMEM88BA6NKF7 163 aa11.73□□□□□ -0.53
UBR1-210ENST00000569337 TAF5LO75529 589 aa11.73□□□□□ -0.53
UBR1-210ENST00000569337 RBM26Q5T8P6 1007 aaKnown RBP11.73□□□□□ -0.53
UBR1-210ENST00000569337 RSBN1LQ6PCB5 846 aaPredicted RBP11.73□□□□□ -0.53
UBR1-210ENST00000569337 USP17L1Q7RTZ2 530 aa11.73□□□□□ -0.53
UBR1-210ENST00000569337 AGBL3Q8NEM8 1001 aa11.73□□□□□ -0.53
UBR1-210ENST00000569337 TRPM4Q8TD43 1214 aa11.73□□□□□ -0.53
UBR1-210ENST00000569337 C1orf115Q9H7X2 142 aa11.73□□□□□ -0.53
UBR1-210ENST00000569337 DDX19BQ9UMR2 479 aa11.73□□□□□ -0.53
UBR1-210ENST00000569337 HIRAP54198 1017 aaPredicted RBP11.72□□□□□ -0.53
UBR1-210ENST00000569337 RABL6Q3YEC7 729 aaPredicted RBP11.72□□□□□ -0.53
UBR1-210ENST00000569337 TBC1D10BQ4KMP7 808 aaPredicted RBP11.72□□□□□ -0.53
UBR1-210ENST00000569337 SAMD7Q7Z3H4 446 aa11.72□□□□□ -0.53
UBR1-210ENST00000569337 TXNRD3Q86VQ6 643 aa11.72□□□□□ -0.53
UBR1-210ENST00000569337 ZC3H15Q8WU90 426 aaKnown RBP11.72□□□□□ -0.53
UBR1-210ENST00000569337 FBXW7Q969H0 707 aa11.72□□□□□ -0.53
UBR1-210ENST00000569337 SNAP23O00161 211 aa11.71□□□□□ -0.53
UBR1-210ENST00000569337 UBTFL1P0CB47 393 aaPredicted RBP11.71□□□□□ -0.53
UBR1-210ENST00000569337 KLRK1P26718 216 aa11.71□□□□□ -0.53
UBR1-210ENST00000569337 ANKRD44Q8N8A2 993 aa11.71□□□□□ -0.53
UBR1-210ENST00000569337 PGAP2Q9UHJ9 254 aa11.71□□□□□ -0.53
UBR1-210ENST00000569337 HDAC5Q9UQL6 1122 aa11.71□□□□□ -0.53
UBR1-210ENST00000569337 LRRFIP2Q9Y608 721 aaKnown RBP11.71□□□□□ -0.53
UBR1-210ENST00000569337 LTBP1Q14766 1721 aa11.71□□□□□ -0.54
UBR1-210ENST00000569337 TRAF5O00463 557 aa11.7□□□□□ -0.54
UBR1-210ENST00000569337 GNAI3P08754 354 aa11.7□□□□□ -0.54
UBR1-210ENST00000569337 USP17L8P0C7I0 530 aa11.7□□□□□ -0.54
UBR1-210ENST00000569337 STRIP1Q5VSL9 837 aa11.7□□□□□ -0.54
UBR1-210ENST00000569337 TTLL5Q6EMB2 1281 aa11.7□□□□□ -0.54
UBR1-210ENST00000569337 C15orf52Q6ZUT6 534 aaKnown RBP11.7□□□□□ -0.54
UBR1-210ENST00000569337 CDC37L1Q7L3B6 337 aa11.7□□□□□ -0.54
UBR1-210ENST00000569337 ZNF804AQ7Z570 1209 aa11.7□□□□□ -0.54
UBR1-210ENST00000569337 PUS3Q9BZE2 481 aaKnown RBP11.7□□□□□ -0.54
UBR1-210ENST00000569337 MKRN1Q9UHC7 482 aaKnown RBP11.7□□□□□ -0.54
UBR1-210ENST00000569337 MROH5Q6ZUA9 1318 aa11.69□□□□□ -0.54
UBR1-210ENST00000569337 EGFRP00533 1210 aa11.69□□□□□ -0.54
UBR1-210ENST00000569337 GTF2IP78347 998 aa11.69□□□□□ -0.54
UBR1-210ENST00000569337 FMR1Q06787 632 aaKnown RBP eCLIP11.69□□□□□ -0.54
UBR1-210ENST00000569337 UBE4AQ14139 1066 aa11.69□□□□□ -0.54
UBR1-210ENST00000569337 KIF4BQ2VIQ3 1234 aa11.69□□□□□ -0.54
UBR1-210ENST00000569337 DACT2Q5SW24 774 aa11.69□□□□□ -0.54
UBR1-210ENST00000569337 OGFOD1Q8N543 542 aa11.69□□□□□ -0.54
UBR1-210ENST00000569337 JMYQ8N9B5 988 aa11.69□□□□□ -0.54
UBR1-210ENST00000569337 DCPSQ96C86 337 aaKnown RBP11.69□□□□□ -0.54
UBR1-210ENST00000569337 GMLQ99445 158 aa11.69□□□□□ -0.54
UBR1-210ENST00000569337 GLIS2Q9BZE0 524 aaPredicted RBP11.69□□□□□ -0.54
UBR1-210ENST00000569337 CD209Q9NNX6 404 aa11.69□□□□□ -0.54
UBR1-210ENST00000569337 ABT1Q9ULW3 272 aaKnown RBP11.69□□□□□ -0.54
UBR1-210ENST00000569337 RIPOR2Q9Y4F9 1068 aa11.69□□□□□ -0.54
UBR1-210ENST00000569337 PCDHB15Q9Y5E8 787 aa11.69□□□□□ -0.54
UBR1-210ENST00000569337 MYO3BQ8WXR4 1341 aa11.68□□□□□ -0.54
UBR1-210ENST00000569337 GNAI2P04899 355 aa11.68□□□□□ -0.54
UBR1-210ENST00000569337 ZNF280AP59817 542 aaPredicted RBP11.68□□□□□ -0.54
UBR1-210ENST00000569337 LRRC24Q50LG9 513 aa11.68□□□□□ -0.54
UBR1-210ENST00000569337 METTL24Q5JXM2 366 aa11.68□□□□□ -0.54
UBR1-210ENST00000569337 USP48Q86UV5 1035 aa11.68□□□□□ -0.54
UBR1-210ENST00000569337 SIRT2Q8IXJ6 389 aa11.68□□□□□ -0.54
UBR1-210ENST00000569337 MXD3Q9BW11 206 aa11.68□□□□□ -0.54
UBR1-210ENST00000569337 ADAMTSL1Q8N6G6 1762 aa11.68□□□□□ -0.54
UBR1-210ENST00000569337 CELF2O95319 508 aaKnown RBP11.67□□□□□ -0.54
UBR1-210ENST00000569337 NEFLP07196 543 aa11.67□□□□□ -0.54
UBR1-210ENST00000569337 DEFB115Q30KQ5 88 aa11.67□□□□□ -0.54
UBR1-210ENST00000569337 CST9Q5W186 159 aa11.67□□□□□ -0.54
UBR1-210ENST00000569337 KRT26Q7Z3Y9 468 aa11.67□□□□□ -0.54
UBR1-210ENST00000569337 KLHDC4Q8TBB5 520 aa11.67□□□□□ -0.54
UBR1-210ENST00000569337 MYOZ2Q9NPC6 264 aa11.67□□□□□ -0.54
UBR1-210ENST00000569337 ZNF609O15014 1411 aa11.67□□□□□ -0.54
UBR1-210ENST00000569337 SPEF2Q9C093 1822 aa11.67□□□□□ -0.54
UBR1-210ENST00000569337 IRS2Q9Y4H2 1338 aa11.66□□□□□ -0.54
UBR1-210ENST00000569337 PNMA6EA0A0J9YXQ4 647 aa11.66□□□□□ -0.54
UBR1-210ENST00000569337 PDE8BO95263 885 aa11.66□□□□□ -0.54
UBR1-210ENST00000569337 IL1R1P14778 569 aa11.66□□□□□ -0.54
UBR1-210ENST00000569337 HIBADHP31937 336 aaKnown RBP11.66□□□□□ -0.54
UBR1-210ENST00000569337 MMP14P50281 582 aa11.66□□□□□ -0.54
UBR1-210ENST00000569337 SCARF1Q14162 830 aa11.66□□□□□ -0.54
UBR1-210ENST00000569337 CEP85Q6P2H3 762 aa11.66□□□□□ -0.54
UBR1-210ENST00000569337 SULF1Q8IWU6 871 aa11.66□□□□□ -0.54
UBR1-210ENST00000569337 ZNF408Q9H9D4 720 aa11.66□□□□□ -0.54
UBR1-210ENST00000569337 GGA3Q9NZ52 723 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms