RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 MYH7P12883 1935 aa18.62■□□□□ 0.57
SNX20-204ENST00000568993 CCDC102BQ68D86 513 aa18.61■□□□□ 0.57
SNX20-204ENST00000568993 FAM196AQ6ZSG2 479 aa18.61■□□□□ 0.57
SNX20-204ENST00000568993 SETDB2Q96T68 719 aa18.61■□□□□ 0.57
SNX20-204ENST00000568993 PDRG1Q9NUG6 133 aa18.61■□□□□ 0.57
SNX20-204ENST00000568993 SRP68Q9UHB9 627 aaKnown RBP18.61■□□□□ 0.57
SNX20-204ENST00000568993 CASZ1Q86V15 1759 aa18.61■□□□□ 0.57
SNX20-204ENST00000568993 DDX11L8A8MPP1 907 aa18.61■□□□□ 0.57
SNX20-204ENST00000568993 SLC5A1P13866 664 aa18.61■□□□□ 0.57
SNX20-204ENST00000568993 SMIM5Q71RC9 77 aa18.61■□□□□ 0.57
SNX20-204ENST00000568993 MAST3O60307 1309 aa18.6■□□□□ 0.57
SNX20-204ENST00000568993 TTF1Q15361 905 aaPredicted RBP18.6■□□□□ 0.57
SNX20-204ENST00000568993 AMIGO3Q86WK7 504 aa18.6■□□□□ 0.57
SNX20-204ENST00000568993 HELBQ8NG08 1087 aaPredicted RBP18.6■□□□□ 0.57
SNX20-204ENST00000568993 BRWD3Q6RI45 1802 aa18.6■□□□□ 0.57
SNX20-204ENST00000568993 C4AP0C0L4 1744 aa18.6■□□□□ 0.57
SNX20-204ENST00000568993 CPA1P15085 419 aa18.59■□□□□ 0.57
SNX20-204ENST00000568993 ZSCAN31Q96LW9 406 aaPredicted RBP18.59■□□□□ 0.57
SNX20-204ENST00000568993 ADRA2BP18089 450 aa18.59■□□□□ 0.57
SNX20-204ENST00000568993 PHKA1P46020 1223 aa18.59■□□□□ 0.57
SNX20-204ENST00000568993 TRAPPC3LQ5T215 181 aa18.59■□□□□ 0.57
SNX20-204ENST00000568993 KRT27Q7Z3Y8 459 aa18.59■□□□□ 0.57
SNX20-204ENST00000568993 OSBP2Q969R2 916 aa18.59■□□□□ 0.57
SNX20-204ENST00000568993 LRRC4BQ9NT99 713 aa18.59■□□□□ 0.57
SNX20-204ENST00000568993 SLFNL1Q499Z3 407 aa18.58■□□□□ 0.56
SNX20-204ENST00000568993 ZSCAN25Q6NSZ9 544 aa18.58■□□□□ 0.56
SNX20-204ENST00000568993 BLOC1S2Q6QNY1 142 aa18.58■□□□□ 0.56
SNX20-204ENST00000568993 BICDL1Q6ZP65 573 aa18.58■□□□□ 0.56
SNX20-204ENST00000568993 C3orf67Q6ZVT6 689 aa18.58■□□□□ 0.56
SNX20-204ENST00000568993 NOL8Q76FK4 1167 aaKnown RBP18.58■□□□□ 0.56
SNX20-204ENST00000568993 APPBP2Q92624 585 aa18.58■□□□□ 0.56
SNX20-204ENST00000568993 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.58■□□□□ 0.56
SNX20-204ENST00000568993 HSPD1P10809 573 aaKnown RBP18.57■□□□□ 0.56
SNX20-204ENST00000568993 RPS6KB1P23443 525 aa18.57■□□□□ 0.56
SNX20-204ENST00000568993 CHRNDQ07001 517 aa18.57■□□□□ 0.56
SNX20-204ENST00000568993 SLC27A3Q5K4L6 730 aa18.57■□□□□ 0.56
SNX20-204ENST00000568993 PI16Q6UXB8 463 aa18.57■□□□□ 0.56
SNX20-204ENST00000568993 TPTE2Q6XPS3 522 aa18.57■□□□□ 0.56
SNX20-204ENST00000568993 SH2B1Q9NRF2 756 aaPredicted RBP18.57■□□□□ 0.56
SNX20-204ENST00000568993 BSDC1Q9NW68 430 aaPredicted RBP18.57■□□□□ 0.56
SNX20-204ENST00000568993 TAF6LQ9Y6J9 622 aa18.57■□□□□ 0.56
SNX20-204ENST00000568993 CYP21A2P08686 494 aa18.57■□□□□ 0.56
SNX20-204ENST00000568993 PTMSP20962 102 aa18.57■□□□□ 0.56
SNX20-204ENST00000568993 GTF2E1P29083 439 aaPredicted RBP18.57■□□□□ 0.56
SNX20-204ENST00000568993 NBPF5PQ86XG9 351 aaPredicted RBP18.57■□□□□ 0.56
SNX20-204ENST00000568993 ANKRD18AQ8IVF6 992 aa18.57■□□□□ 0.56
SNX20-204ENST00000568993 ZDHHC9Q9Y397 364 aa18.57■□□□□ 0.56
SNX20-204ENST00000568993 COL4A1P02462 1669 aa18.57■□□□□ 0.56
SNX20-204ENST00000568993 M0R2C6 588 aa18.56■□□□□ 0.56
SNX20-204ENST00000568993 RFC4P35249 363 aa18.56■□□□□ 0.56
SNX20-204ENST00000568993 ANKRD1Q15327 319 aa18.56■□□□□ 0.56
SNX20-204ENST00000568993 A0A1B0GUL6 1792 aa18.56■□□□□ 0.56
SNX20-204ENST00000568993 UBR3Q6ZT12 1888 aa18.56■□□□□ 0.56
SNX20-204ENST00000568993 PKP1Q13835 747 aa18.56■□□□□ 0.56
SNX20-204ENST00000568993 GSE1Q14687 1217 aa18.56■□□□□ 0.56
SNX20-204ENST00000568993 NLRP3Q96P20 1036 aa18.56■□□□□ 0.56
SNX20-204ENST00000568993 ADD2P35612 726 aa18.55■□□□□ 0.56
SNX20-204ENST00000568993 DEKP35659 375 aaKnown RBP18.55■□□□□ 0.56
SNX20-204ENST00000568993 UBE3CQ15386 1083 aa18.55■□□□□ 0.56
SNX20-204ENST00000568993 BAG4O95429 457 aaKnown RBP18.54■□□□□ 0.56
SNX20-204ENST00000568993 HMGB2P26583 209 aaKnown RBP18.54■□□□□ 0.56
SNX20-204ENST00000568993 SPATA5Q8NB90 893 aa18.54■□□□□ 0.56
SNX20-204ENST00000568993 NEK1Q96PY6 1258 aa18.54■□□□□ 0.56
SNX20-204ENST00000568993 PIH1D3Q9NQM4 214 aaKnown RBP18.54■□□□□ 0.56
SNX20-204ENST00000568993 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.54■□□□□ 0.56
SNX20-204ENST00000568993 DOCK2Q92608 1830 aa18.54■□□□□ 0.56
SNX20-204ENST00000568993 BRD1O95696 1058 aa18.54■□□□□ 0.56
SNX20-204ENST00000568993 UBE4AQ14139 1066 aa18.54■□□□□ 0.56
SNX20-204ENST00000568993 WASHC4Q2M389 1173 aa18.54■□□□□ 0.56
SNX20-204ENST00000568993 TAF1P21675 1872 aa18.53■□□□□ 0.56
SNX20-204ENST00000568993 MYO5AQ9Y4I1 1855 aaKnown RBP18.53■□□□□ 0.56
SNX20-204ENST00000568993 SNAP23O00161 211 aa18.53■□□□□ 0.56
SNX20-204ENST00000568993 HMGB1P09429 215 aaKnown RBP18.53■□□□□ 0.56
SNX20-204ENST00000568993 COL9A3Q14050 684 aaPredicted RBP18.53■□□□□ 0.56
SNX20-204ENST00000568993 CARMIL3Q8ND23 1372 aa18.53■□□□□ 0.56
SNX20-204ENST00000568993 RASGRF1Q13972 1273 aa18.52■□□□□ 0.56
SNX20-204ENST00000568993 PUS7LQ9H0K6 701 aaKnown RBP18.52■□□□□ 0.56
SNX20-204ENST00000568993 CTNNA3Q9UI47 895 aa18.52■□□□□ 0.56
SNX20-204ENST00000568993 MINPP1Q9UNW1 487 aa18.52■□□□□ 0.56
SNX20-204ENST00000568993 FOXP2O15409 715 aa18.52■□□□□ 0.55
SNX20-204ENST00000568993 TRAK2O60296 914 aa18.52■□□□□ 0.55
SNX20-204ENST00000568993 LARGE1O95461 756 aa18.52■□□□□ 0.55
SNX20-204ENST00000568993 RPS8P62241 208 aaKnown RBP18.52■□□□□ 0.55
SNX20-204ENST00000568993 RBM6P78332 1123 aaKnown RBP18.52■□□□□ 0.55
SNX20-204ENST00000568993 TOB2Q14106 344 aaPredicted RBP18.52■□□□□ 0.55
SNX20-204ENST00000568993 SLC9C2Q5TAH2 1124 aa18.52■□□□□ 0.55
SNX20-204ENST00000568993 ZNF772Q68DY9 489 aaPredicted RBP18.52■□□□□ 0.55
SNX20-204ENST00000568993 TPCN1Q9ULQ1 816 aa18.52■□□□□ 0.55
SNX20-204ENST00000568993 ZNF804BA4D1E1 1349 aa18.52■□□□□ 0.55
SNX20-204ENST00000568993 ME3Q16798 604 aa18.51■□□□□ 0.55
SNX20-204ENST00000568993 CELF1Q92879 486 aaKnown RBP18.51■□□□□ 0.55
SNX20-204ENST00000568993 LAMA4Q16363 1823 aa18.51■□□□□ 0.55
SNX20-204ENST00000568993 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.5■□□□□ 0.55
SNX20-204ENST00000568993 TCRBV5S4A2TA0A5A2 114 aa18.5■□□□□ 0.55
SNX20-204ENST00000568993 GOLGA6L22H0YM25 854 aa18.5■□□□□ 0.55
SNX20-204ENST00000568993 PHF14O94880 888 aa18.5■□□□□ 0.55
SNX20-204ENST00000568993 TM4SF1P30408 202 aa18.5■□□□□ 0.55
SNX20-204ENST00000568993 BCAMP50895 628 aa18.5■□□□□ 0.55
SNX20-204ENST00000568993 NFIXQ14938 502 aa18.5■□□□□ 0.55
SNX20-204ENST00000568993 STOX1Q6ZVD7 989 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms