RNA–Protein interactions for RNA: ENST00000568206.1

HERC2-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-210ENST00000568206 UBR3Q6ZT12 1888 aa23.13■■□□□ 1.29
HERC2-210ENST00000568206 CASTP20810 708 aaKnown RBP23.13■■□□□ 1.29
HERC2-210ENST00000568206 BSDC1Q9NW68 430 aaPredicted RBP23.13■■□□□ 1.29
HERC2-210ENST00000568206 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.12■■□□□ 1.29
HERC2-210ENST00000568206 FRAT2O75474 233 aaPredicted RBP23.12■■□□□ 1.29
HERC2-210ENST00000568206 CHRNDQ07001 517 aa23.12■■□□□ 1.29
HERC2-210ENST00000568206 TSGA10IPQ3SY00 556 aa23.12■■□□□ 1.29
HERC2-210ENST00000568206 ZSCAN25Q6NSZ9 544 aa23.12■■□□□ 1.29
HERC2-210ENST00000568206 JAKMIP1Q96N16 626 aaKnown RBP23.12■■□□□ 1.29
HERC2-210ENST00000568206 TTC14Q96N46 770 aa23.12■■□□□ 1.29
HERC2-210ENST00000568206 SEC62Q99442 399 aaKnown RBP23.12■■□□□ 1.29
HERC2-210ENST00000568206 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.12■■□□□ 1.296e-9■■■■■ 60.6
HERC2-210ENST00000568206 C3orf67Q6ZVT6 689 aa23.11■■□□□ 1.29
HERC2-210ENST00000568206 ZSWIM6Q9HCJ5 1215 aa23.11■■□□□ 1.29
HERC2-210ENST00000568206 CYP46A1Q9Y6A2 500 aa23.11■■□□□ 1.29
HERC2-210ENST00000568206 AKAP11Q9UKA4 1901 aa23.11■■□□□ 1.29
HERC2-210ENST00000568206 PHKA1P46020 1223 aa23.11■■□□□ 1.29
HERC2-210ENST00000568206 CUL4AQ13619 759 aa23.11■■□□□ 1.29
HERC2-210ENST00000568206 KRT32Q14532 448 aa23.11■■□□□ 1.29
HERC2-210ENST00000568206 DSCC1Q9BVC3 393 aa23.11■■□□□ 1.29
HERC2-210ENST00000568206 VPS53Q5VIR6 699 aa23.1■■□□□ 1.29
HERC2-210ENST00000568206 CCDC129Q6ZRS4 1044 aa23.1■■□□□ 1.29
HERC2-210ENST00000568206 RPAP1Q9BWH6 1393 aaPredicted RBP23.1■■□□□ 1.29
HERC2-210ENST00000568206 NPHP1O15259 732 aa23.09■■□□□ 1.29
HERC2-210ENST00000568206 CHGBP05060 677 aa23.09■■□□□ 1.29
HERC2-210ENST00000568206 RAB3GAP1Q15042 981 aa23.09■■□□□ 1.29
HERC2-210ENST00000568206 INTS4Q96HW7 963 aaKnown RBP23.09■■□□□ 1.29
HERC2-210ENST00000568206 MAST3O60307 1309 aa23.09■■□□□ 1.29
HERC2-210ENST00000568206 ADCK5Q3MIX3 580 aa23.09■■□□□ 1.29
HERC2-210ENST00000568206 RUFY3Q7L099 469 aa23.09■■□□□ 1.29
HERC2-210ENST00000568206 BRPF3Q9ULD4 1205 aa23.09■■□□□ 1.29
HERC2-210ENST00000568206 APPBP2Q92624 585 aa23.08■■□□□ 1.29
HERC2-210ENST00000568206 MYH7P12883 1935 aa23.08■■□□□ 1.29
HERC2-210ENST00000568206 NUCB2P80303 420 aa23.08■■□□□ 1.28
HERC2-210ENST00000568206 NFIXQ14938 502 aa23.08■■□□□ 1.28
HERC2-210ENST00000568206 PI16Q6UXB8 463 aa23.08■■□□□ 1.28
HERC2-210ENST00000568206 PDRG1Q9NUG6 133 aa23.08■■□□□ 1.28
HERC2-210ENST00000568206 CYP2E1P05181 493 aaPredicted RBP23.07■■□□□ 1.28
HERC2-210ENST00000568206 UBE4AQ14139 1066 aa23.07■■□□□ 1.28
HERC2-210ENST00000568206 TXNRD1Q16881 649 aa23.07■■□□□ 1.28
HERC2-210ENST00000568206 LIMCH1Q9UPQ0 1083 aa23.07■■□□□ 1.28
HERC2-210ENST00000568206 RXRBP28702 533 aa23.06■■□□□ 1.28
HERC2-210ENST00000568206 AK2P54819 239 aa23.06■■□□□ 1.28
HERC2-210ENST00000568206 WASHC4Q2M389 1173 aa23.06■■□□□ 1.28
HERC2-210ENST00000568206 COL4A1P02462 1669 aa23.06■■□□□ 1.28
HERC2-210ENST00000568206 PLSCR1O15162 318 aa23.06■■□□□ 1.28
HERC2-210ENST00000568206 RPS8P62241 208 aaKnown RBP23.06■■□□□ 1.28
HERC2-210ENST00000568206 CNBD1Q8NA66 436 aa23.06■■□□□ 1.28
HERC2-210ENST00000568206 SPATA5Q8NB90 893 aa23.06■■□□□ 1.28
HERC2-210ENST00000568206 OSBP2Q969R2 916 aa23.06■■□□□ 1.28
HERC2-210ENST00000568206 A0A1B0GUL6 1792 aa23.06■■□□□ 1.28
HERC2-210ENST00000568206 BLOC1S2Q6QNY1 142 aa23.05■■□□□ 1.28
HERC2-210ENST00000568206 NOL8Q76FK4 1167 aaKnown RBP23.05■■□□□ 1.28
HERC2-210ENST00000568206 CELF1Q92879 486 aaKnown RBP23.05■■□□□ 1.28
HERC2-210ENST00000568206 MINPP1Q9UNW1 487 aa23.05■■□□□ 1.28
HERC2-210ENST00000568206 M0R2C6 588 aa23.04■■□□□ 1.28
HERC2-210ENST00000568206 HSPD1P10809 573 aaKnown RBP23.04■■□□□ 1.28
HERC2-210ENST00000568206 GYS1P13807 737 aa23.04■■□□□ 1.28
HERC2-210ENST00000568206 EP400Q96L91 3159 aa23.04■■□□□ 1.28
HERC2-210ENST00000568206 ADD2P35612 726 aa23.04■■□□□ 1.28
HERC2-210ENST00000568206 UBE3CQ15386 1083 aa23.04■■□□□ 1.28
HERC2-210ENST00000568206 SLFNL1Q499Z3 407 aa23.04■■□□□ 1.28
HERC2-210ENST00000568206 ZGPATQ8N5A5 531 aaKnown RBP23.04■■□□□ 1.28
HERC2-210ENST00000568206 SNAP23O00161 211 aa23.03■■□□□ 1.28
HERC2-210ENST00000568206 RASGRF1Q13972 1273 aa23.03■■□□□ 1.28
HERC2-210ENST00000568206 ANKRD1Q15327 319 aa23.03■■□□□ 1.28
HERC2-210ENST00000568206 TNPO1Q92973 898 aaKnown RBP23.03■■□□□ 1.28
HERC2-210ENST00000568206 ZSCAN31Q96LW9 406 aaPredicted RBP23.03■■□□□ 1.28
HERC2-210ENST00000568206 GBP4Q96PP9 640 aa23.03■■□□□ 1.28
HERC2-210ENST00000568206 ALDH8A1Q9H2A2 487 aaPredicted RBP23.03■■□□□ 1.28
HERC2-210ENST00000568206 PROM2Q8N271 834 aa23.03■■□□□ 1.28
HERC2-210ENST00000568206 ANKRD2Q9GZV1 360 aa23.03■■□□□ 1.28
HERC2-210ENST00000568206 PIH1D3Q9NQM4 214 aaKnown RBP23.03■■□□□ 1.28
HERC2-210ENST00000568206 GNL3LQ9NVN8 582 aaKnown RBP23.03■■□□□ 1.28
HERC2-210ENST00000568206 RPS6KB1P23443 525 aa23.02■■□□□ 1.28
HERC2-210ENST00000568206 MCM4P33991 863 aa23.02■■□□□ 1.28
HERC2-210ENST00000568206 SLC9C2Q5TAH2 1124 aa23.02■■□□□ 1.28
HERC2-210ENST00000568206 SH2B1Q9NRF2 756 aaPredicted RBP23.02■■□□□ 1.28
HERC2-210ENST00000568206 IDH1O75874 414 aaKnown RBP23.01■■□□□ 1.27
HERC2-210ENST00000568206 CYP21A2P08686 494 aa23.01■■□□□ 1.27
HERC2-210ENST00000568206 CPA1P15085 419 aa23.01■■□□□ 1.27
HERC2-210ENST00000568206 BCAMP50895 628 aa23.01■■□□□ 1.27
HERC2-210ENST00000568206 CTNNA3Q9UI47 895 aa23.01■■□□□ 1.27
HERC2-210ENST00000568206 ZNF804BA4D1E1 1349 aa23.01■■□□□ 1.27
HERC2-210ENST00000568206 TNRC6CQ9HCJ0 1690 aaKnown RBP23.01■■□□□ 1.27
HERC2-210ENST00000568206 TAF1P21675 1872 aa23.01■■□□□ 1.27
HERC2-210ENST00000568206 TM4SF1P30408 202 aa23.01■■□□□ 1.27
HERC2-210ENST00000568206 MAP3K12Q12852 859 aa23.01■■□□□ 1.27
HERC2-210ENST00000568206 CAVIN4Q5BKX8 364 aa23.01■■□□□ 1.27
HERC2-210ENST00000568206 HMGB1P09429 215 aaKnown RBP23■■□□□ 1.27
HERC2-210ENST00000568206 ST5P78524 1137 aa23■■□□□ 1.27
HERC2-210ENST00000568206 CCDC24Q8N4L8 307 aa23■■□□□ 1.27
HERC2-210ENST00000568206 NEK1Q96PY6 1258 aa23■■□□□ 1.27
HERC2-210ENST00000568206 DOCK2Q92608 1830 aa23■■□□□ 1.27
HERC2-210ENST00000568206 DDX11L8A8MPP1 907 aa22.99■■□□□ 1.27
HERC2-210ENST00000568206 APBA3O96018 575 aa22.99■■□□□ 1.27
HERC2-210ENST00000568206 PRR5LQ6MZQ0 368 aa22.99■■□□□ 1.27
HERC2-210ENST00000568206 PUS7LQ9H0K6 701 aaKnown RBP22.99■■□□□ 1.27
HERC2-210ENST00000568206 PDE6AP16499 860 aa22.99■■□□□ 1.27
HERC2-210ENST00000568206 FAM43AQ8N2R8 423 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms