RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 USP17L4A6NCW7 530 aa18.14■□□□□ 0.49
SMG1-213ENST00000567737 RPS8P62241 208 aaKnown RBP18.14■□□□□ 0.49
SMG1-213ENST00000567737 PROSER3Q2NL68 480 aa18.14■□□□□ 0.49
SMG1-213ENST00000567737 USP17L1Q7RTZ2 530 aa18.14■□□□□ 0.49
SMG1-213ENST00000567737 ZNF428Q96B54 188 aa18.14■□□□□ 0.49
SMG1-213ENST00000567737 RBM27Q9P2N5 1060 aaKnown RBP18.14■□□□□ 0.49
SMG1-213ENST00000567737 ANGEL1Q9UNK9 670 aaKnown RBP18.14■□□□□ 0.49
SMG1-213ENST00000567737 TRIOBPQ9H2D6 2365 aa18.14■□□□□ 0.49
SMG1-213ENST00000567737 SZT2Q5T011 3432 aa18.13■□□□□ 0.49
SMG1-213ENST00000567737 LDLRAD1Q5T700 205 aa18.13■□□□□ 0.49
SMG1-213ENST00000567737 OTUD7BQ6GQQ9 843 aa18.13■□□□□ 0.49
SMG1-213ENST00000567737 OGFOD1Q8N543 542 aa18.13■□□□□ 0.49
SMG1-213ENST00000567737 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
SMG1-213ENST00000567737 SLC10A4Q96EP9 437 aa18.13■□□□□ 0.49
SMG1-213ENST00000567737 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.13■□□□□ 0.49
SMG1-213ENST00000567737 BRCA2P51587 3418 aa18.13■□□□□ 0.49
SMG1-213ENST00000567737 IGF2BP3O00425 579 aaKnown RBP eCLIP18.12■□□□□ 0.49
SMG1-213ENST00000567737 ZBTB48P10074 688 aaPredicted RBP18.12■□□□□ 0.49
SMG1-213ENST00000567737 SP3Q02447 781 aa18.12■□□□□ 0.49
SMG1-213ENST00000567737 SLC9C1Q4G0N8 1177 aa18.12■□□□□ 0.49
SMG1-213ENST00000567737 WNT10BO00744 389 aa18.11■□□□□ 0.49
SMG1-213ENST00000567737 CRHR2Q13324 411 aa18.11■□□□□ 0.49
SMG1-213ENST00000567737 PODNQ7Z5L7 613 aa18.11■□□□□ 0.49
SMG1-213ENST00000567737 FAM89AQ96GI7 184 aa18.11■□□□□ 0.49
SMG1-213ENST00000567737 ARHGEF6Q15052 776 aa18.1■□□□□ 0.49
SMG1-213ENST00000567737 APOBEC3FQ8IUX4 373 aaKnown RBP18.1■□□□□ 0.49
SMG1-213ENST00000567737 COL4A1P02462 1669 aa18.09■□□□□ 0.49
SMG1-213ENST00000567737 MNX1P50219 401 aaPredicted RBP18.09■□□□□ 0.49
SMG1-213ENST00000567737 DPF3Q92784 378 aa18.09■□□□□ 0.49
SMG1-213ENST00000567737 WNK4Q96J92 1243 aa18.09■□□□□ 0.49
SMG1-213ENST00000567737 TSPYL4Q9UJ04 414 aa18.09■□□□□ 0.49
SMG1-213ENST00000567737 PSME4Q14997 1843 aa18.08■□□□□ 0.48
SMG1-213ENST00000567737 IRS4O14654 1257 aaPredicted RBP18.07■□□□□ 0.48
SMG1-213ENST00000567737 SASH1O94885 1247 aa18.07■□□□□ 0.48
SMG1-213ENST00000567737 MYCP01106 439 aaPredicted RBP18.07■□□□□ 0.48
SMG1-213ENST00000567737 RTL5Q5HYW3 569 aaPredicted RBP18.07■□□□□ 0.48
SMG1-213ENST00000567737 FZD1Q9UP38 647 aa18.07■□□□□ 0.48
SMG1-213ENST00000567737 PTCH2Q9Y6C5 1203 aa18.07■□□□□ 0.48
SMG1-213ENST00000567737 MYO3BQ8WXR4 1341 aa18.06■□□□□ 0.48
SMG1-213ENST00000567737 FBXW7Q969H0 707 aa18.06■□□□□ 0.48
SMG1-213ENST00000567737 CLSPNQ9HAW4 1339 aa18.05■□□□□ 0.48
SMG1-213ENST00000567737 PPP1R12BO60237 982 aaPredicted RBP18.05■□□□□ 0.48
SMG1-213ENST00000567737 MMP14P50281 582 aa18.05■□□□□ 0.48
SMG1-213ENST00000567737 MAP3K11Q16584 847 aa18.05■□□□□ 0.48
SMG1-213ENST00000567737 ISCA1Q9BUE6 129 aa18.05■□□□□ 0.48
SMG1-213ENST00000567737 SEC31BQ9NQW1 1179 aa18.05■□□□□ 0.48
SMG1-213ENST00000567737 XDHP47989 1333 aa18.04■□□□□ 0.48
SMG1-213ENST00000567737 COL1A1P02452 1464 aaPredicted RBP18.04■□□□□ 0.48
SMG1-213ENST00000567737 ATP5J2-PTCD1G3V325 749 aa18.04■□□□□ 0.48
SMG1-213ENST00000567737 ATP2B4P23634 1241 aa18.04■□□□□ 0.48
SMG1-213ENST00000567737 CAP1Q01518 475 aa18.04■□□□□ 0.48
SMG1-213ENST00000567737 DACT2Q5SW24 774 aa18.04■□□□□ 0.48
SMG1-213ENST00000567737 PLBD2Q8NHP8 589 aa18.04■□□□□ 0.48
SMG1-213ENST00000567737 CLMNQ96JQ2 1002 aa18.04■□□□□ 0.48
SMG1-213ENST00000567737 MXD3Q9BW11 206 aa18.04■□□□□ 0.48
SMG1-213ENST00000567737 CEP290O15078 2479 aa18.04■□□□□ 0.48
SMG1-213ENST00000567737 DLG5Q8TDM6 1919 aa18.04■□□□□ 0.48
SMG1-213ENST00000567737 UNCXA6NJT0 531 aa18.03■□□□□ 0.48
SMG1-213ENST00000567737 NFE2L2Q16236 605 aa18.03■□□□□ 0.48
SMG1-213ENST00000567737 A0A0C4DFX4 3053 aa18.03■□□□□ 0.48
SMG1-213ENST00000567737 HSP90B1P14625 803 aaKnown RBP18.02■□□□□ 0.48
SMG1-213ENST00000567737 WTIPA6NIX2 430 aaPredicted RBP18.01■□□□□ 0.47
SMG1-213ENST00000567737 PPP2R1AP30153 589 aa18.01■□□□□ 0.47
SMG1-213ENST00000567737 STRIP1Q5VSL9 837 aa18.01■□□□□ 0.47
SMG1-213ENST00000567737 ANKRD13DQ6ZTN6 518 aa18.01■□□□□ 0.47
SMG1-213ENST00000567737 SH3TC2Q8TF17 1288 aa18.01■□□□□ 0.47
SMG1-213ENST00000567737 PTPN18Q99952 460 aa18.01■□□□□ 0.47
SMG1-213ENST00000567737 HTATIP2Q9BUP3 242 aa18.01■□□□□ 0.47
SMG1-213ENST00000567737 DEFB129Q9H1M3 183 aa18.01■□□□□ 0.47
SMG1-213ENST00000567737 PRO3102Q9H379 93 aa18.01■□□□□ 0.47
SMG1-213ENST00000567737 COL6A3P12111 3177 aa18.01■□□□□ 0.47
SMG1-213ENST00000567737 LAMB1P07942 1786 aa18■□□□□ 0.47
SMG1-213ENST00000567737 TESPA1A2RU30 521 aaPredicted RBP18■□□□□ 0.47
SMG1-213ENST00000567737 CCDC152Q4G0S7 254 aa18■□□□□ 0.47
SMG1-213ENST00000567737 PPP2R3BQ9Y5P8 575 aa18■□□□□ 0.47
SMG1-213ENST00000567737 NR2E3Q9Y5X4 410 aa18■□□□□ 0.47
SMG1-213ENST00000567737 MED23Q9ULK4 1368 aa18■□□□□ 0.47
SMG1-213ENST00000567737 A0A1W2PPC1 479 aa17.99■□□□□ 0.47
SMG1-213ENST00000567737 GJA5P36382 358 aa17.99■□□□□ 0.47
SMG1-213ENST00000567737 IREB2P48200 963 aaKnown RBP17.99■□□□□ 0.47
SMG1-213ENST00000567737 ANKRD18AQ8IVF6 992 aa17.99■□□□□ 0.47
SMG1-213ENST00000567737 SPDYE1Q8NFV5 336 aaPredicted RBP17.99■□□□□ 0.47
SMG1-213ENST00000567737 ZFYVE28Q9HCC9 887 aa17.99■□□□□ 0.47
SMG1-213ENST00000567737 BABAM1Q9NWV8 329 aa17.99■□□□□ 0.47
SMG1-213ENST00000567737 TAF1CQ15572 869 aaPredicted RBP17.98■□□□□ 0.47
SMG1-213ENST00000567737 SUPT20HL1Q3ZLR7 823 aa17.98■□□□□ 0.47
SMG1-213ENST00000567737 KIAA0825Q8IV33 1275 aa17.98■□□□□ 0.47
SMG1-213ENST00000567737 MAPK8IP3Q9UPT6 1336 aa17.98■□□□□ 0.47
SMG1-213ENST00000567737 RANBP2P49792 3224 aaKnown RBP17.97■□□□□ 0.47
SMG1-213ENST00000567737 SSC5DA1L4H1 1573 aa17.97■□□□□ 0.47
SMG1-213ENST00000567737 KIF22Q14807 665 aa17.97■□□□□ 0.47
SMG1-213ENST00000567737 ANKRD13AQ8IZ07 590 aa17.97■□□□□ 0.47
SMG1-213ENST00000567737 ZBTB38Q8NAP3 1195 aaPredicted RBP17.97■□□□□ 0.47
SMG1-213ENST00000567737 NKX2-3Q8TAU0 364 aa17.97■□□□□ 0.47
SMG1-213ENST00000567737 SHISA4Q96DD7 197 aa17.97■□□□□ 0.47
SMG1-213ENST00000567737 ZBED3Q96IU2 234 aaPredicted RBP17.97■□□□□ 0.47
SMG1-213ENST00000567737 PLEKHF1Q96S99 279 aa17.97■□□□□ 0.47
SMG1-213ENST00000567737 COA1Q9GZY4 146 aa17.97■□□□□ 0.47
SMG1-213ENST00000567737 CHPF2Q9P2E5 772 aa17.97■□□□□ 0.47
SMG1-213ENST00000567737 TRIM28Q13263 835 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms