RNA–Protein interactions for RNA: ENST00000565993.1

AC055855.2-201, humanhuman

TSL 2 BASIC

Gene AC055855.2, Length 500 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.2-201ENST00000565993 ANKMY2Q8IV38 441 aa8.14□□□□□ -1.11
AC055855.2-201ENST00000565993 CCER1Q8TC90 406 aaPredicted RBP8.14□□□□□ -1.11
AC055855.2-201ENST00000565993 VTI1AQ96AJ9 217 aa8.14□□□□□ -1.11
AC055855.2-201ENST00000565993 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.14□□□□□ -1.11
AC055855.2-201ENST00000565993 CCNB3Q8WWL7 1395 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 CHD1O14646 1710 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 USP17L15C9J2P7 530 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 USP17L10C9JJH3 530 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 USP17L13C9JLJ4 530 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 USP17L12C9JPN9 530 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 USP17L11C9JVI0 530 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 USP17L21D6R901 530 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 USP17L18D6R9N7 530 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 USP17L22D6RA61 530 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 USP17L17D6RBQ6 530 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 USP17L19D6RCP7 530 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 USP17L20D6RJB6 530 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 OPLAHO14841 1288 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 GLB1P16278 677 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 WEE1P30291 646 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 USP17L24Q0WX57 530 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 KANK4Q5T7N3 995 aaPredicted RBP8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 GLMNQ92990 594 aa8.13□□□□□ -1.11
AC055855.2-201ENST00000565993 NUP160Q12769 1436 aa8.12□□□□□ -1.11
AC055855.2-201ENST00000565993 RAPGEF6Q8TEU7 1601 aa8.12□□□□□ -1.11
AC055855.2-201ENST00000565993 STOML1Q9UBI4 398 aa8.12□□□□□ -1.11
AC055855.2-201ENST00000565993 CARMIL2Q6F5E8 1435 aa8.12□□□□□ -1.11
AC055855.2-201ENST00000565993 MTUS2Q5JR59 1369 aa8.11□□□□□ -1.11
AC055855.2-201ENST00000565993 J3QW42 95 aa8.11□□□□□ -1.11
AC055855.2-201ENST00000565993 DHX15O43143 795 aaKnown RBP8.11□□□□□ -1.11
AC055855.2-201ENST00000565993 LGR5O75473 907 aa8.11□□□□□ -1.11
AC055855.2-201ENST00000565993 GP2P55259 537 aaKnown RBP8.11□□□□□ -1.11
AC055855.2-201ENST00000565993 UVSSAQ2YD98 709 aa8.11□□□□□ -1.11
AC055855.2-201ENST00000565993 DISP1Q96F81 1524 aa8.1□□□□□ -1.11
AC055855.2-201ENST00000565993 MMP20O60882 483 aa8.1□□□□□ -1.11
AC055855.2-201ENST00000565993 INTS5Q6P9B9 1019 aaKnown RBP8.1□□□□□ -1.11
AC055855.2-201ENST00000565993 RGL4Q8IZJ4 473 aa8.1□□□□□ -1.11
AC055855.2-201ENST00000565993 AGGF1Q8N302 714 aaeCLIP8.1□□□□□ -1.11
AC055855.2-201ENST00000565993 NSUN5Q96P11 429 aaKnown RBP8.1□□□□□ -1.11
AC055855.2-201ENST00000565993 CEP41Q9BYV8 373 aa8.1□□□□□ -1.11
AC055855.2-201ENST00000565993 OAS3Q9Y6K5 1087 aaKnown RBP8.1□□□□□ -1.11
AC055855.2-201ENST00000565993 TGFB1P01137 390 aa8.09□□□□□ -1.11
AC055855.2-201ENST00000565993 TAL1P17542 331 aaPredicted RBP8.09□□□□□ -1.11
AC055855.2-201ENST00000565993 GRIK1P39086 918 aa8.09□□□□□ -1.11
AC055855.2-201ENST00000565993 TREML1Q86YW5 311 aa8.09□□□□□ -1.11
AC055855.2-201ENST00000565993 CMTR1Q8N1G2 835 aaKnown RBP8.09□□□□□ -1.11
AC055855.2-201ENST00000565993 PPME1Q9Y570 386 aa8.09□□□□□ -1.11
AC055855.2-201ENST00000565993 KCNMB2Q9Y691 235 aa8.09□□□□□ -1.11
AC055855.2-201ENST00000565993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.09□□□□□ -1.12
AC055855.2-201ENST00000565993 EPRSP07814 1512 aaKnown RBP8.08□□□□□ -1.12
AC055855.2-201ENST00000565993 MED26O95402 600 aa8.08□□□□□ -1.12
AC055855.2-201ENST00000565993 ZDHHC13Q8IUH4 622 aa8.08□□□□□ -1.12
AC055855.2-201ENST00000565993 UBL7Q96S82 380 aaPredicted RBP8.08□□□□□ -1.12
AC055855.2-201ENST00000565993 PPP1R12CQ9BZL4 782 aa8.08□□□□□ -1.12
AC055855.2-201ENST00000565993 TRIM33Q9UPN9 1127 aa8.08□□□□□ -1.12
AC055855.2-201ENST00000565993 USP20Q9Y2K6 914 aa8.08□□□□□ -1.12
AC055855.2-201ENST00000565993 SPINK2P20155 84 aa8.07□□□□□ -1.12
AC055855.2-201ENST00000565993 NFIAQ12857 509 aa8.07□□□□□ -1.12
AC055855.2-201ENST00000565993 ARXQ96QS3 562 aa8.07□□□□□ -1.12
AC055855.2-201ENST00000565993 VRTNQ9H8Y1 702 aa8.07□□□□□ -1.12
AC055855.2-201ENST00000565993 LRFN2Q9ULH4 789 aa8.07□□□□□ -1.12
AC055855.2-201ENST00000565993 NLRP13Q86W25 1043 aa8.06□□□□□ -1.12
AC055855.2-201ENST00000565993 ARMC10Q8N2F6 343 aa8.06□□□□□ -1.12
AC055855.2-201ENST00000565993 FNBP4Q8N3X1 1017 aaPredicted RBP8.06□□□□□ -1.12
AC055855.2-201ENST00000565993 PHLDB1Q86UU1 1377 aa8.06□□□□□ -1.12
AC055855.2-201ENST00000565993 NCOA2Q15596 1464 aa8.06□□□□□ -1.12
AC055855.2-201ENST00000565993 ITSN2Q9NZM3 1697 aa8.05□□□□□ -1.12
AC055855.2-201ENST00000565993 MYOM3Q5VTT5 1437 aa8.05□□□□□ -1.12
AC055855.2-201ENST00000565993 FGD6Q6ZV73 1430 aa8.05□□□□□ -1.12
AC055855.2-201ENST00000565993 SHROOM2Q13796 1616 aa8.05□□□□□ -1.12
AC055855.2-201ENST00000565993 CD68P34810 354 aaPredicted RBP8.05□□□□□ -1.12
AC055855.2-201ENST00000565993 PROSER2Q86WR7 435 aaPredicted RBP8.05□□□□□ -1.12
AC055855.2-201ENST00000565993 UTP4Q969X6 686 aaKnown RBP8.05□□□□□ -1.12
AC055855.2-201ENST00000565993 DBNDD2Q9BQY9 259 aa8.05□□□□□ -1.12
AC055855.2-201ENST00000565993 RNF114Q9Y508 228 aa8.05□□□□□ -1.12
AC055855.2-201ENST00000565993 CLSPNQ9HAW4 1339 aa8.04□□□□□ -1.12
AC055855.2-201ENST00000565993 ARHGEF11O15085 1522 aa8.04□□□□□ -1.12
AC055855.2-201ENST00000565993 PTPN23Q9H3S7 1636 aa8.04□□□□□ -1.12
AC055855.2-201ENST00000565993 RNF43Q68DV7 783 aa8.04□□□□□ -1.12
AC055855.2-201ENST00000565993 ACAD11Q709F0 780 aa8.04□□□□□ -1.12
AC055855.2-201ENST00000565993 DTX1Q86Y01 620 aa8.04□□□□□ -1.12
AC055855.2-201ENST00000565993 GALNT11Q8NCW6 608 aa8.04□□□□□ -1.12
AC055855.2-201ENST00000565993 FAM46AQ96IP4 442 aaKnown RBP8.04□□□□□ -1.12
AC055855.2-201ENST00000565993 CDK11AQ9UQ88 783 aaPredicted RBP8.04□□□□□ -1.12
AC055855.2-201ENST00000565993 CDK13Q14004 1512 aaKnown RBP8.03□□□□□ -1.12
AC055855.2-201ENST00000565993 ADCY10Q96PN6 1610 aa8.03□□□□□ -1.12
AC055855.2-201ENST00000565993 NUP153P49790 1475 aaKnown RBP8.03□□□□□ -1.12
AC055855.2-201ENST00000565993 WISP1O95388 367 aa8.03□□□□□ -1.12
AC055855.2-201ENST00000565993 OR13H1Q8NG92 308 aa8.03□□□□□ -1.12
AC055855.2-201ENST00000565993 MYRFLQ96LU7 910 aa8.03□□□□□ -1.12
AC055855.2-201ENST00000565993 C7orf69Q9H7B7 122 aa8.03□□□□□ -1.12
AC055855.2-201ENST00000565993 MAGI3Q5TCQ9 1506 aa8.03□□□□□ -1.12
AC055855.2-201ENST00000565993 LINC01387J3KSC0 135 aa8.02□□□□□ -1.13
AC055855.2-201ENST00000565993 SMNDC1O75940 238 aaKnown RBP eCLIP8.02□□□□□ -1.13
AC055855.2-201ENST00000565993 FAM50AQ14320 339 aaKnown RBP8.02□□□□□ -1.13
AC055855.2-201ENST00000565993 COX20Q5RI15 118 aa8.02□□□□□ -1.13
AC055855.2-201ENST00000565993 KLHL23Q8NBE8 558 aa8.02□□□□□ -1.13
AC055855.2-201ENST00000565993 SPACA7Q96KW9 195 aa8.02□□□□□ -1.13
AC055855.2-201ENST00000565993 CALR3Q96L12 384 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms