RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 HMX1Q9NP08 348 aaPredicted RBP10.04□□□□□ -0.8
TCF4-221ENST00000563888 GJA3Q9Y6H8 435 aa10.04□□□□□ -0.8
TCF4-221ENST00000563888 CCDC88AQ3V6T2 1871 aa10.04□□□□□ -0.8
TCF4-221ENST00000563888 NPHP1O15259 732 aa10.03□□□□□ -0.8
TCF4-221ENST00000563888 CCDC82Q8N4S0 544 aa10.03□□□□□ -0.8
TCF4-221ENST00000563888 CNKSR1Q969H4 720 aa10.03□□□□□ -0.8
TCF4-221ENST00000563888 CARD11Q9BXL7 1154 aa10.03□□□□□ -0.8
TCF4-221ENST00000563888 SERPINA10Q9UK55 444 aa10.03□□□□□ -0.8
TCF4-221ENST00000563888 SOS1Q07889 1333 aaPredicted RBP10.03□□□□□ -0.8
TCF4-221ENST00000563888 CASP8AP2Q9UKL3 1982 aa10.03□□□□□ -0.8
TCF4-221ENST00000563888 ST20-MTHFSA0A0A6YYL1 179 aa10.02□□□□□ -0.81
TCF4-221ENST00000563888 DLL1O00548 723 aa10.02□□□□□ -0.81
TCF4-221ENST00000563888 CELF2O95319 508 aaKnown RBP10.02□□□□□ -0.81
TCF4-221ENST00000563888 HSP90AB1P08238 724 aaKnown RBP10.02□□□□□ -0.81
TCF4-221ENST00000563888 MTHFSP49914 203 aa10.02□□□□□ -0.81
TCF4-221ENST00000563888 WASHC4Q2M389 1173 aa10.02□□□□□ -0.81
TCF4-221ENST00000563888 SOGA3Q5TF21 947 aa10.02□□□□□ -0.81
TCF4-221ENST00000563888 ZIC5Q96T25 663 aa10.02□□□□□ -0.81
TCF4-221ENST00000563888 MYH14Q7Z406 1995 aaKnown RBP10.01□□□□□ -0.81
TCF4-221ENST00000563888 LMOD1P29536 600 aaPredicted RBP10.01□□□□□ -0.81
TCF4-221ENST00000563888 COPS2P61201 443 aa10.01□□□□□ -0.81
TCF4-221ENST00000563888 NR6A1Q15406 480 aa10.01□□□□□ -0.81
TCF4-221ENST00000563888 PRR5LQ6MZQ0 368 aa10.01□□□□□ -0.81
TCF4-221ENST00000563888 ZNF530Q6P9A1 599 aaPredicted RBP10.01□□□□□ -0.81
TCF4-221ENST00000563888 OLFM4Q6UX06 510 aa10.01□□□□□ -0.81
TCF4-221ENST00000563888 NYAP1Q6ZVC0 841 aa10.01□□□□□ -0.81
TCF4-221ENST00000563888 SAPCD2Q86UD0 394 aa10.01□□□□□ -0.81
TCF4-221ENST00000563888 GPC2Q8N158 579 aa10.01□□□□□ -0.81
TCF4-221ENST00000563888 ZNF408Q9H9D4 720 aa10.01□□□□□ -0.81
TCF4-221ENST00000563888 PDZRN3Q9UPQ7 1066 aa10.01□□□□□ -0.81
TCF4-221ENST00000563888 TONSLQ96HA7 1378 aa10.01□□□□□ -0.81
TCF4-221ENST00000563888 LTBP1Q14766 1721 aa10□□□□□ -0.81
TCF4-221ENST00000563888 PER1O15534 1290 aaPredicted RBP10□□□□□ -0.81
TCF4-221ENST00000563888 CANXP27824 592 aaKnown RBP10□□□□□ -0.81
TCF4-221ENST00000563888 EPS15P42566 896 aa10□□□□□ -0.81
TCF4-221ENST00000563888 NEUROD1Q13562 356 aa10□□□□□ -0.81
TCF4-221ENST00000563888 CCDC93Q567U6 631 aa10□□□□□ -0.81
TCF4-221ENST00000563888 TBC1D9BQ66K14 1250 aa10□□□□□ -0.81
TCF4-221ENST00000563888 LYPD8Q6UX82 237 aa10□□□□□ -0.81
TCF4-221ENST00000563888 CALR3Q96L12 384 aaKnown RBP10□□□□□ -0.81
TCF4-221ENST00000563888 PUS7Q96PZ0 661 aaKnown RBP10□□□□□ -0.81
TCF4-221ENST00000563888 TRIM34Q9BYJ4 488 aa10□□□□□ -0.81
TCF4-221ENST00000563888 ZBTB1Q9Y2K1 713 aa10□□□□□ -0.81
TCF4-221ENST00000563888 COL15A1P39059 1388 aa10□□□□□ -0.81
TCF4-221ENST00000563888 CYP19A1P11511 503 aaPredicted RBP9.99□□□□□ -0.81
TCF4-221ENST00000563888 FKBP4Q02790 459 aaKnown RBP eCLIP9.99□□□□□ -0.81
TCF4-221ENST00000563888 PLEKHO1Q53GL0 409 aaPredicted RBP9.99□□□□□ -0.81
TCF4-221ENST00000563888 STYK1Q6J9G0 422 aa9.99□□□□□ -0.81
TCF4-221ENST00000563888 MASTLQ96GX5 879 aa9.99□□□□□ -0.81
TCF4-221ENST00000563888 SPSB2Q99619 263 aa9.99□□□□□ -0.81
TCF4-221ENST00000563888 CUL9Q8IWT3 2517 aa9.99□□□□□ -0.81
TCF4-221ENST00000563888 COL5A3P25940 1745 aaPredicted RBP9.99□□□□□ -0.81
TCF4-221ENST00000563888 FZD9O00144 591 aa9.98□□□□□ -0.81
TCF4-221ENST00000563888 TRPA1O75762 1119 aa9.98□□□□□ -0.81
TCF4-221ENST00000563888 SRGNP10124 158 aa9.98□□□□□ -0.81
TCF4-221ENST00000563888 SYNE4Q8N205 404 aa9.98□□□□□ -0.81
TCF4-221ENST00000563888 THAP11Q96EK4 314 aa9.98□□□□□ -0.81
TCF4-221ENST00000563888 SIN3AQ96ST3 1273 aa9.98□□□□□ -0.81
TCF4-221ENST00000563888 KIF24Q5T7B8 1368 aa9.98□□□□□ -0.81
TCF4-221ENST00000563888 SZT2Q5T011 3432 aa9.98□□□□□ -0.81
TCF4-221ENST00000563888 SCN4AP35499 1836 aa9.98□□□□□ -0.81
TCF4-221ENST00000563888 MKI67P46013 3256 aaKnown RBP9.97□□□□□ -0.81
TCF4-221ENST00000563888 JUNDP17535 347 aa9.97□□□□□ -0.81
TCF4-221ENST00000563888 IARSP41252 1262 aaKnown RBP9.97□□□□□ -0.81
TCF4-221ENST00000563888 FXR1P51114 621 aaKnown RBP eCLIP9.97□□□□□ -0.81
TCF4-221ENST00000563888 EIF6P56537 245 aaKnown RBP9.97□□□□□ -0.81
TCF4-221ENST00000563888 NOGQ13253 232 aa9.97□□□□□ -0.81
TCF4-221ENST00000563888 C1orf141Q5JVX7 400 aa9.97□□□□□ -0.81
TCF4-221ENST00000563888 CTU1Q7Z7A3 348 aaKnown RBP9.97□□□□□ -0.81
TCF4-221ENST00000563888 CNBD1Q8NA66 436 aa9.97□□□□□ -0.81
TCF4-221ENST00000563888 EPS8L1Q8TE68 723 aa9.97□□□□□ -0.81
TCF4-221ENST00000563888 C7orf43Q8WVR3 580 aa9.97□□□□□ -0.81
TCF4-221ENST00000563888 JDP2Q8WYK2 163 aa9.97□□□□□ -0.81
TCF4-221ENST00000563888 WASHC2AQ641Q2 1341 aa9.97□□□□□ -0.81
TCF4-221ENST00000563888 NCAPD2Q15021 1401 aa9.97□□□□□ -0.81
TCF4-221ENST00000563888 THSD7BQ9C0I4 1608 aa9.96□□□□□ -0.81
TCF4-221ENST00000563888 CTHP32929 405 aa9.96□□□□□ -0.82
TCF4-221ENST00000563888 ST5P78524 1137 aa9.96□□□□□ -0.82
TCF4-221ENST00000563888 SLC39A6Q13433 755 aa9.96□□□□□ -0.82
TCF4-221ENST00000563888 USP50Q70EL3 339 aaPredicted RBP9.96□□□□□ -0.82
TCF4-221ENST00000563888 RTKN2Q8IZC4 609 aa9.96□□□□□ -0.82
TCF4-221ENST00000563888 GLIS2Q9BZE0 524 aaPredicted RBP9.96□□□□□ -0.82
TCF4-221ENST00000563888 ADAMTSL1Q8N6G6 1762 aa9.96□□□□□ -0.82
TCF4-221ENST00000563888 AFDNP55196 1824 aaKnown RBP9.96□□□□□ -0.82
TCF4-221ENST00000563888 SCNN1DP51172 638 aa9.95□□□□□ -0.82
TCF4-221ENST00000563888 HUNKP57058 714 aa9.95□□□□□ -0.82
TCF4-221ENST00000563888 IRF5Q13568 498 aa9.95□□□□□ -0.82
TCF4-221ENST00000563888 EIF4A2Q14240 407 aaKnown RBP9.95□□□□□ -0.82
TCF4-221ENST00000563888 AKAP4Q5JQC9 854 aa9.95□□□□□ -0.82
TCF4-221ENST00000563888 SLC17A8Q8NDX2 589 aa9.95□□□□□ -0.82
TCF4-221ENST00000563888 HHIPL1Q96JK4 782 aa9.95□□□□□ -0.82
TCF4-221ENST00000563888 SETDB2Q96T68 719 aa9.95□□□□□ -0.82
TCF4-221ENST00000563888 RNF186Q9NXI6 227 aa9.95□□□□□ -0.82
TCF4-221ENST00000563888 ZNF831Q5JPB2 1677 aa9.95□□□□□ -0.82
TCF4-221ENST00000563888 FER1L6Q2WGJ9 1857 aa9.95□□□□□ -0.82
TCF4-221ENST00000563888 DICER1Q9UPY3 1922 aaKnown RBP9.95□□□□□ -0.82
TCF4-221ENST00000563888 DLEC1Q9Y238 1755 aa9.94□□□□□ -0.82
TCF4-221ENST00000563888 A0A087WZG4 1122 aa9.94□□□□□ -0.82
TCF4-221ENST00000563888 POM121CA8CG34 1229 aa9.94□□□□□ -0.82
TCF4-221ENST00000563888 KIF23Q02241 960 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms