RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 VEGFBP49765 207 aa11.66□□□□□ -0.54
PTPN9-203ENST00000563835 KIF4BQ2VIQ3 1234 aa11.66□□□□□ -0.54
PTPN9-203ENST00000563835 ALDH1L2Q3SY69 923 aa11.66□□□□□ -0.54
PTPN9-203ENST00000563835 RSBN1LQ6PCB5 846 aaPredicted RBP11.66□□□□□ -0.54
PTPN9-203ENST00000563835 ANKRD44Q8N8A2 993 aa11.66□□□□□ -0.54
PTPN9-203ENST00000563835 BICC1Q9H694 974 aaKnown RBP11.66□□□□□ -0.54
PTPN9-203ENST00000563835 PGAP2Q9UHJ9 254 aa11.66□□□□□ -0.54
PTPN9-203ENST00000563835 ABT1Q9ULW3 272 aaKnown RBP11.66□□□□□ -0.54
PTPN9-203ENST00000563835 ECM29Q5VYK3 1845 aa11.65□□□□□ -0.54
PTPN9-203ENST00000563835 USP17L3A6NCW0 530 aa11.65□□□□□ -0.54
PTPN9-203ENST00000563835 USP17L4A6NCW7 530 aa11.65□□□□□ -0.54
PTPN9-203ENST00000563835 ADM5C9JUS6 153 aa11.65□□□□□ -0.54
PTPN9-203ENST00000563835 KCNJ4P48050 445 aa11.65□□□□□ -0.54
PTPN9-203ENST00000563835 TAF7LQ5H9L4 462 aa11.65□□□□□ -0.54
PTPN9-203ENST00000563835 DACT2Q5SW24 774 aa11.65□□□□□ -0.54
PTPN9-203ENST00000563835 USP17L1Q7RTZ2 530 aa11.65□□□□□ -0.54
PTPN9-203ENST00000563835 GMLQ99445 158 aa11.65□□□□□ -0.54
PTPN9-203ENST00000563835 PUS3Q9BZE2 481 aaKnown RBP11.65□□□□□ -0.54
PTPN9-203ENST00000563835 ANKRD2Q9GZV1 360 aa11.65□□□□□ -0.54
PTPN9-203ENST00000563835 ZNF408Q9H9D4 720 aa11.65□□□□□ -0.54
PTPN9-203ENST00000563835 GGA3Q9NZ52 723 aa11.65□□□□□ -0.54
PTPN9-203ENST00000563835 LEMD3Q9Y2U8 911 aa11.65□□□□□ -0.54
PTPN9-203ENST00000563835 RASSF10A6NK89 507 aa11.64□□□□□ -0.55
PTPN9-203ENST00000563835 CELF2O95319 508 aaKnown RBP11.64□□□□□ -0.55
PTPN9-203ENST00000563835 ZNF280AP59817 542 aaPredicted RBP11.64□□□□□ -0.55
PTPN9-203ENST00000563835 CCDC57Q2TAC2 916 aa11.64□□□□□ -0.55
PTPN9-203ENST00000563835 PODNQ7Z5L7 613 aa11.64□□□□□ -0.55
PTPN9-203ENST00000563835 USP48Q86UV5 1035 aa11.64□□□□□ -0.55
PTPN9-203ENST00000563835 KLHDC4Q8TBB5 520 aa11.64□□□□□ -0.55
PTPN9-203ENST00000563835 ZC3H15Q8WU90 426 aaKnown RBP11.64□□□□□ -0.55
PTPN9-203ENST00000563835 COA1Q9GZY4 146 aa11.64□□□□□ -0.55
PTPN9-203ENST00000563835 SCAF8Q9UPN6 1271 aaKnown RBP11.64□□□□□ -0.55
PTPN9-203ENST00000563835 MYH13Q9UKX3 1938 aa11.64□□□□□ -0.55
PTPN9-203ENST00000563835 PLIN1O60240 522 aa11.63□□□□□ -0.55
PTPN9-203ENST00000563835 GRM1Q13255 1194 aa11.63□□□□□ -0.55
PTPN9-203ENST00000563835 RABL6Q3YEC7 729 aaPredicted RBP11.63□□□□□ -0.55
PTPN9-203ENST00000563835 LDHAL6AQ6ZMR3 332 aa11.63□□□□□ -0.55
PTPN9-203ENST00000563835 AGBL3Q8NEM8 1001 aa11.63□□□□□ -0.55
PTPN9-203ENST00000563835 USP44Q9H0E7 712 aa11.63□□□□□ -0.55
PTPN9-203ENST00000563835 CNNM1Q9NRU3 951 aa11.63□□□□□ -0.55
PTPN9-203ENST00000563835 NOB1Q9ULX3 412 aaKnown RBP11.63□□□□□ -0.55
PTPN9-203ENST00000563835 USP17L8P0C7I0 530 aa11.62□□□□□ -0.55
PTPN9-203ENST00000563835 RARSP54136 660 aaKnown RBP11.62□□□□□ -0.55
PTPN9-203ENST00000563835 GTF2IP78347 998 aa11.62□□□□□ -0.55
PTPN9-203ENST00000563835 HNRNPUQ00839 825 aaKnown RBP eCLIP11.62□□□□□ -0.55
PTPN9-203ENST00000563835 DEFB115Q30KQ5 88 aa11.62□□□□□ -0.55
PTPN9-203ENST00000563835 CYP4F22Q6NT55 531 aa11.62□□□□□ -0.55
PTPN9-203ENST00000563835 PAXIP1Q6ZW49 1069 aaPredicted RBP11.62□□□□□ -0.55
PTPN9-203ENST00000563835 CDC37L1Q7L3B6 337 aa11.62□□□□□ -0.55
PTPN9-203ENST00000563835 KRT26Q7Z3Y9 468 aa11.62□□□□□ -0.55
PTPN9-203ENST00000563835 CD209Q9NNX6 404 aa11.62□□□□□ -0.55
PTPN9-203ENST00000563835 MYOZ2Q9NPC6 264 aa11.62□□□□□ -0.55
PTPN9-203ENST00000563835 TNNQ9UQP3 1299 aa11.62□□□□□ -0.55
PTPN9-203ENST00000563835 JAG2Q9Y219 1238 aa11.62□□□□□ -0.55
PTPN9-203ENST00000563835 TLL2Q9Y6L7 1015 aa11.62□□□□□ -0.55
PTPN9-203ENST00000563835 WDR33Q9C0J8 1336 aaKnown RBP11.61□□□□□ -0.55
PTPN9-203ENST00000563835 SASH1O94885 1247 aa11.61□□□□□ -0.55
PTPN9-203ENST00000563835 CT47B1P0C2W7 299 aaPredicted RBP11.61□□□□□ -0.55
PTPN9-203ENST00000563835 SCARF1Q14162 830 aa11.61□□□□□ -0.55
PTPN9-203ENST00000563835 LRRC24Q50LG9 513 aa11.61□□□□□ -0.55
PTPN9-203ENST00000563835 COL13A1Q5TAT6 717 aaPredicted RBP11.61□□□□□ -0.55
PTPN9-203ENST00000563835 STRIP1Q5VSL9 837 aa11.61□□□□□ -0.55
PTPN9-203ENST00000563835 ANGEL2Q5VTE6 544 aaKnown RBP11.61□□□□□ -0.55
PTPN9-203ENST00000563835 CERS5Q8N5B7 392 aa11.61□□□□□ -0.55
PTPN9-203ENST00000563835 CAPNS2Q96L46 248 aa11.61□□□□□ -0.55
PTPN9-203ENST00000563835 PAPPA2Q9BXP8 1791 aa11.6□□□□□ -0.55
PTPN9-203ENST00000563835 FOXN1O15353 648 aa11.6□□□□□ -0.55
PTPN9-203ENST00000563835 GYG1P46976 350 aa11.6□□□□□ -0.55
PTPN9-203ENST00000563835 NBPF9Q3BBW0 867 aa11.6□□□□□ -0.55
PTPN9-203ENST00000563835 TTLL5Q6EMB2 1281 aa11.6□□□□□ -0.55
PTPN9-203ENST00000563835 C15orf52Q6ZUT6 534 aaKnown RBP11.6□□□□□ -0.55
PTPN9-203ENST00000563835 SAPCD2Q86UD0 394 aa11.6□□□□□ -0.55
PTPN9-203ENST00000563835 KIAA0825Q8IV33 1275 aa11.6□□□□□ -0.55
PTPN9-203ENST00000563835 DCPSQ96C86 337 aaKnown RBP11.6□□□□□ -0.55
PTPN9-203ENST00000563835 MYO3BQ8WXR4 1341 aa11.6□□□□□ -0.55
PTPN9-203ENST00000563835 AOC2O75106 756 aa11.59□□□□□ -0.55
PTPN9-203ENST00000563835 BCAR3O75815 825 aa11.59□□□□□ -0.55
PTPN9-203ENST00000563835 RFX5P48382 616 aaPredicted RBP11.59□□□□□ -0.55
PTPN9-203ENST00000563835 BRPF1P55201 1214 aaPredicted RBP11.59□□□□□ -0.55
PTPN9-203ENST00000563835 ZNF804AQ7Z570 1209 aa11.59□□□□□ -0.55
PTPN9-203ENST00000563835 VGLL2Q8N8G2 317 aa11.59□□□□□ -0.55
PTPN9-203ENST00000563835 CDCA5Q96FF9 252 aa11.59□□□□□ -0.55
PTPN9-203ENST00000563835 MEIS3Q99687 375 aa11.59□□□□□ -0.55
PTPN9-203ENST00000563835 API5Q9BZZ5 524 aaKnown RBP11.59□□□□□ -0.55
PTPN9-203ENST00000563835 RIPOR2Q9Y4F9 1068 aa11.59□□□□□ -0.55
PTPN9-203ENST00000563835 PCDHAC2Q9Y5I4 1007 aa11.59□□□□□ -0.55
PTPN9-203ENST00000563835 KIF16BQ96L93 1317 aa11.59□□□□□ -0.55
PTPN9-203ENST00000563835 F8W031 263 aaPredicted RBP11.58□□□□□ -0.56
PTPN9-203ENST00000563835 IL1R1P14778 569 aa11.58□□□□□ -0.56
PTPN9-203ENST00000563835 METTL24Q5JXM2 366 aa11.58□□□□□ -0.56
PTPN9-203ENST00000563835 SULF1Q8IWU6 871 aa11.58□□□□□ -0.56
PTPN9-203ENST00000563835 LRRFIP2Q9Y608 721 aaKnown RBP11.58□□□□□ -0.56
PTPN9-203ENST00000563835 AOX1Q06278 1338 aa11.58□□□□□ -0.56
PTPN9-203ENST00000563835 MROH5Q6ZUA9 1318 aa11.58□□□□□ -0.56
PTPN9-203ENST00000563835 COL1A1P02452 1464 aaPredicted RBP11.57□□□□□ -0.56
PTPN9-203ENST00000563835 WNT10BO00744 389 aa11.57□□□□□ -0.56
PTPN9-203ENST00000563835 UBTFL1P0CB47 393 aaPredicted RBP11.57□□□□□ -0.56
PTPN9-203ENST00000563835 TRIM27P14373 513 aa11.57□□□□□ -0.56
PTPN9-203ENST00000563835 HUNKP57058 714 aa11.57□□□□□ -0.56
PTPN9-203ENST00000563835 UBE4AQ14139 1066 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms