RNA–Protein interactions for RNA: ENST00000563760.5

TCF4-219, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-219ENST00000563760 PRO3102Q9H379 93 aa11.31□□□□□ -0.6
TCF4-219ENST00000563760 PTCH2Q9Y6C5 1203 aa11.31□□□□□ -0.6
TCF4-219ENST00000563760 USP17L3A6NCW0 530 aa11.3□□□□□ -0.6
TCF4-219ENST00000563760 USP17L4A6NCW7 530 aa11.3□□□□□ -0.6
TCF4-219ENST00000563760 CAP1Q01518 475 aa11.3□□□□□ -0.6
TCF4-219ENST00000563760 USP17L1Q7RTZ2 530 aa11.3□□□□□ -0.6
TCF4-219ENST00000563760 LRP10Q7Z4F1 713 aa11.3□□□□□ -0.6
TCF4-219ENST00000563760 WNK4Q96J92 1243 aa11.3□□□□□ -0.6
TCF4-219ENST00000563760 PODXL2Q9NZ53 605 aa11.3□□□□□ -0.6
TCF4-219ENST00000563760 ANKIB1Q9P2G1 1089 aa11.3□□□□□ -0.6
TCF4-219ENST00000563760 DLG5Q8TDM6 1919 aa11.3□□□□□ -0.6
TCF4-219ENST00000563760 COL4A1P02462 1669 aa11.3□□□□□ -0.6
TCF4-219ENST00000563760 A0A1W2PPC1 479 aa11.29□□□□□ -0.6
TCF4-219ENST00000563760 WTIPA6NIX2 430 aaPredicted RBP11.29□□□□□ -0.6
TCF4-219ENST00000563760 WNT10BO00744 389 aa11.29□□□□□ -0.6
TCF4-219ENST00000563760 RPS8P62241 208 aaKnown RBP11.29□□□□□ -0.6
TCF4-219ENST00000563760 SF3B3Q15393 1217 aaKnown RBP11.29□□□□□ -0.6
TCF4-219ENST00000563760 APOBEC3FQ8IUX4 373 aaKnown RBP11.29□□□□□ -0.6
TCF4-219ENST00000563760 OGFOD1Q8N543 542 aa11.29□□□□□ -0.6
TCF4-219ENST00000563760 GGA1Q9UJY5 639 aa11.29□□□□□ -0.6
TCF4-219ENST00000563760 NUDCQ9Y266 331 aa11.29□□□□□ -0.6
TCF4-219ENST00000563760 SOX1O00570 391 aaPredicted RBP11.28□□□□□ -0.6
TCF4-219ENST00000563760 PER1O15534 1290 aaPredicted RBP11.28□□□□□ -0.6
TCF4-219ENST00000563760 U2AF1L5P0DN76 240 aaPredicted RBP11.28□□□□□ -0.6
TCF4-219ENST00000563760 U2AF1Q01081 240 aaKnown RBP eCLIP11.28□□□□□ -0.6
TCF4-219ENST00000563760 CNGB1Q14028 1251 aaPredicted RBP11.28□□□□□ -0.6
TCF4-219ENST00000563760 PDIA6Q15084 440 aa11.28□□□□□ -0.6
TCF4-219ENST00000563760 ZNF428Q96B54 188 aa11.28□□□□□ -0.6
TCF4-219ENST00000563760 LRCH3Q96II8 777 aa11.28□□□□□ -0.6
TCF4-219ENST00000563760 CFAP53Q96M91 514 aa11.28□□□□□ -0.6
TCF4-219ENST00000563760 HTATIP2Q9BUP3 242 aa11.28□□□□□ -0.6
TCF4-219ENST00000563760 COL25A1Q9BXS0 654 aaPredicted RBP11.28□□□□□ -0.6
TCF4-219ENST00000563760 FZD1Q9UP38 647 aa11.28□□□□□ -0.6
TCF4-219ENST00000563760 NR2E3Q9Y5X4 410 aa11.28□□□□□ -0.6
TCF4-219ENST00000563760 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
TCF4-219ENST00000563760 ANXA1P04083 346 aa11.27□□□□□ -0.61
TCF4-219ENST00000563760 EIF2S2P20042 333 aaKnown RBP11.27□□□□□ -0.61
TCF4-219ENST00000563760 AIMP1Q12904 312 aaKnown RBP11.27□□□□□ -0.61
TCF4-219ENST00000563760 COPS6Q7L5N1 327 aa11.27□□□□□ -0.61
TCF4-219ENST00000563760 PODNQ7Z5L7 613 aa11.27□□□□□ -0.61
TCF4-219ENST00000563760 SH3TC2Q8TF17 1288 aa11.27□□□□□ -0.61
TCF4-219ENST00000563760 CLMNQ96JQ2 1002 aa11.27□□□□□ -0.61
TCF4-219ENST00000563760 PPP1R12BO60237 982 aaPredicted RBP11.26□□□□□ -0.61
TCF4-219ENST00000563760 SASH1O94885 1247 aa11.26□□□□□ -0.61
TCF4-219ENST00000563760 MAP3K11Q16584 847 aa11.26□□□□□ -0.61
TCF4-219ENST00000563760 PROSER3Q2NL68 480 aa11.26□□□□□ -0.61
TCF4-219ENST00000563760 ANKRD13DQ6ZTN6 518 aa11.26□□□□□ -0.61
TCF4-219ENST00000563760 FAM89AQ96GI7 184 aa11.26□□□□□ -0.61
TCF4-219ENST00000563760 COL1A1P02452 1464 aaPredicted RBP11.25□□□□□ -0.61
TCF4-219ENST00000563760 UNCXA6NJT0 531 aa11.25□□□□□ -0.61
TCF4-219ENST00000563760 XAGE3Q8WTP9 111 aa11.25□□□□□ -0.61
TCF4-219ENST00000563760 SHISA4Q96DD7 197 aa11.25□□□□□ -0.61
TCF4-219ENST00000563760 PTPN18Q99952 460 aa11.25□□□□□ -0.61
TCF4-219ENST00000563760 MYO3BQ8WXR4 1341 aa11.25□□□□□ -0.61
TCF4-219ENST00000563760 CLSPNQ9HAW4 1339 aa11.25□□□□□ -0.61
TCF4-219ENST00000563760 EYSQ5T1H1 3165 aa11.24□□□□□ -0.61
TCF4-219ENST00000563760 TESPA1A2RU30 521 aaPredicted RBP11.24□□□□□ -0.61
TCF4-219ENST00000563760 ZBTB7BO15156 539 aaPredicted RBP11.24□□□□□ -0.61
TCF4-219ENST00000563760 ATXN8OSP0DMR3 200 aa11.24□□□□□ -0.61
TCF4-219ENST00000563760 MMP14P50281 582 aa11.24□□□□□ -0.61
TCF4-219ENST00000563760 RTL5Q5HYW3 569 aaPredicted RBP11.24□□□□□ -0.61
TCF4-219ENST00000563760 ERICH6Q7L0X2 663 aa11.24□□□□□ -0.61
TCF4-219ENST00000563760 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
TCF4-219ENST00000563760 FBXW7Q969H0 707 aa11.24□□□□□ -0.61
TCF4-219ENST00000563760 MXD3Q9BW11 206 aa11.24□□□□□ -0.61
TCF4-219ENST00000563760 DEFB129Q9H1M3 183 aa11.24□□□□□ -0.61
TCF4-219ENST00000563760 ZFYVE28Q9HCC9 887 aa11.24□□□□□ -0.61
TCF4-219ENST00000563760 STXBP5LQ9Y2K9 1186 aa11.24□□□□□ -0.61
TCF4-219ENST00000563760 ZSWIM8A7E2V4 1837 aa11.23□□□□□ -0.61
TCF4-219ENST00000563760 SPTBN5Q9NRC6 3674 aaKnown RBP11.23□□□□□ -0.61
TCF4-219ENST00000563760 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
TCF4-219ENST00000563760 NEFMP07197 916 aa11.23□□□□□ -0.61
TCF4-219ENST00000563760 GJA5P36382 358 aa11.23□□□□□ -0.61
TCF4-219ENST00000563760 TAF1CQ15572 869 aaPredicted RBP11.23□□□□□ -0.61
TCF4-219ENST00000563760 DACT2Q5SW24 774 aa11.23□□□□□ -0.61
TCF4-219ENST00000563760 GPR153Q6NV75 609 aa11.23□□□□□ -0.61
TCF4-219ENST00000563760 DEFB123Q8N688 67 aa11.23□□□□□ -0.61
TCF4-219ENST00000563760 SEC31BQ9NQW1 1179 aa11.23□□□□□ -0.61
TCF4-219ENST00000563760 XDHP47989 1333 aa11.23□□□□□ -0.61
TCF4-219ENST00000563760 ECM29Q5VYK3 1845 aa11.23□□□□□ -0.61
TCF4-219ENST00000563760 SSC5DA1L4H1 1573 aa11.22□□□□□ -0.61
TCF4-219ENST00000563760 IRS4O14654 1257 aaPredicted RBP11.22□□□□□ -0.61
TCF4-219ENST00000563760 ATP2B4P23634 1241 aa11.22□□□□□ -0.61
TCF4-219ENST00000563760 IREB2P48200 963 aaKnown RBP11.22□□□□□ -0.61
TCF4-219ENST00000563760 KIF22Q14807 665 aa11.22□□□□□ -0.61
TCF4-219ENST00000563760 MTFR1Q15390 333 aa11.22□□□□□ -0.61
TCF4-219ENST00000563760 STRIP1Q5VSL9 837 aa11.22□□□□□ -0.61
TCF4-219ENST00000563760 UBE2Q1Q7Z7E8 422 aa11.22□□□□□ -0.61
TCF4-219ENST00000563760 TSPYL4Q9UJ04 414 aa11.22□□□□□ -0.61
TCF4-219ENST00000563760 GJA8P48165 433 aa11.21□□□□□ -0.61
TCF4-219ENST00000563760 SUPT20HL1Q3ZLR7 823 aa11.21□□□□□ -0.61
TCF4-219ENST00000563760 ANKRD13AQ8IZ07 590 aa11.21□□□□□ -0.61
TCF4-219ENST00000563760 STAP2Q9UGK3 403 aa11.21□□□□□ -0.61
TCF4-219ENST00000563760 PPP2R3BQ9Y5P8 575 aa11.21□□□□□ -0.61
TCF4-219ENST00000563760 OTOFQ9HC10 1997 aa11.21□□□□□ -0.62
TCF4-219ENST00000563760 LAMA2P24043 3122 aaKnown RBP11.2□□□□□ -0.62
TCF4-219ENST00000563760 ATP5J2-PTCD1G3V325 749 aa11.2□□□□□ -0.62
TCF4-219ENST00000563760 EVI5O60447 810 aa11.2□□□□□ -0.62
TCF4-219ENST00000563760 WDHD1O75717 1129 aaPredicted RBP11.2□□□□□ -0.62
TCF4-219ENST00000563760 GNRH1P01148 92 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms