RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 DHX58Q96C10 678 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 CEP83Q9Y592 693 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 GJA3Q9Y6H8 435 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 ATP2C2O75185 946 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 HS2ST1Q7LGA3 356 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 RBM8AQ9Y5S9 174 aaKnown RBP12.76□□□□□ -0.37
RPAP1-204ENST00000562303 TOPBP1Q92547 1522 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 GNAT2P19087 354 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 MIGA1Q8NAN2 632 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 RBM27Q9P2N5 1060 aaKnown RBP12.76□□□□□ -0.37
RPAP1-204ENST00000562303 ZSCAN22P10073 491 aaPredicted RBP12.75□□□□□ -0.37
RPAP1-204ENST00000562303 CALML3P27482 149 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 CEP135Q66GS9 1140 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 LMBR1Q8WVP7 490 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 NOD1Q9Y239 953 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 TRIM75PA6NK02 468 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 SLU7O95391 586 aaKnown RBP12.75□□□□□ -0.37
RPAP1-204ENST00000562303 LDHBP07195 334 aaKnown RBP12.75□□□□□ -0.37
RPAP1-204ENST00000562303 MAPK8IP2Q13387 824 aaPredicted RBP12.75□□□□□ -0.37
RPAP1-204ENST00000562303 PAG1Q9NWQ8 432 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 ABCC5O15440 1437 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 IL2RBP14784 551 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 BMS1Q14692 1282 aaKnown RBP12.75□□□□□ -0.37
RPAP1-204ENST00000562303 GIMAP6Q6P9H5 292 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.75□□□□□ -0.37
RPAP1-204ENST00000562303 MRPS27Q92552 414 aaKnown RBP12.75□□□□□ -0.37
RPAP1-204ENST00000562303 ANKRD2Q9GZV1 360 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 SH3BP5O60239 455 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 ALDH1L1O75891 902 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 PSMC4P43686 418 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 AKAP4Q5JQC9 854 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 MAGEB6Q8N7X4 407 aa12.75□□□□□ -0.37
RPAP1-204ENST00000562303 TACC1O75410 805 aa12.74□□□□□ -0.37
RPAP1-204ENST00000562303 GTF2F1P35269 517 aaKnown RBP eCLIP12.74□□□□□ -0.37
RPAP1-204ENST00000562303 KRT2P35908 639 aa12.74□□□□□ -0.37
RPAP1-204ENST00000562303 SNX16P57768 344 aa12.74□□□□□ -0.37
RPAP1-204ENST00000562303 KSR2Q6VAB6 950 aa12.74□□□□□ -0.37
RPAP1-204ENST00000562303 NSRP1Q9H0G5 558 aaKnown RBP12.74□□□□□ -0.37
RPAP1-204ENST00000562303 NCOA1Q15788 1441 aa12.74□□□□□ -0.37
RPAP1-204ENST00000562303 HELBQ8NG08 1087 aaPredicted RBP12.74□□□□□ -0.37
RPAP1-204ENST00000562303 IRS4O14654 1257 aaPredicted RBP12.74□□□□□ -0.37
RPAP1-204ENST00000562303 TXNDC16Q9P2K2 825 aa12.74□□□□□ -0.37
RPAP1-204ENST00000562303 JAG2Q9Y219 1238 aa12.74□□□□□ -0.37
RPAP1-204ENST00000562303 TNRQ92752 1358 aa12.74□□□□□ -0.37
RPAP1-204ENST00000562303 KIAA1524Q8TCG1 905 aa12.74□□□□□ -0.37
RPAP1-204ENST00000562303 RBM17Q96I25 401 aaKnown RBP12.74□□□□□ -0.37
RPAP1-204ENST00000562303 ODF2LQ9ULJ1 636 aa12.74□□□□□ -0.37
RPAP1-204ENST00000562303 CTAGE15A4D2H0 777 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 CTAGE8P0CG41 777 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 CTAGE6Q86UF2 777 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 CTAGE4Q8IX94 777 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 MEIS3Q99687 375 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 PKD2L1Q9P0L9 805 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 TMX3Q96JJ7 454 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 FAM169AQ9Y6X4 670 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 FBLN1P23142 703 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 CCDC6Q16204 474 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 ZNF408Q9H9D4 720 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 DENND4BO75064 1496 aaPredicted RBP12.73□□□□□ -0.37
RPAP1-204ENST00000562303 MCM7P33993 719 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 UVSSAQ2YD98 709 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 MAP7D1Q3KQU3 841 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 C14orf93Q9H972 538 aaKnown RBP12.73□□□□□ -0.37
RPAP1-204ENST00000562303 PRDM10Q9NQV6 1147 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 GNA11P29992 359 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 CABLES1Q8TDN4 633 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 SH2D4AQ9H788 454 aa12.73□□□□□ -0.37
RPAP1-204ENST00000562303 KIAA0586Q9BVV6 1533 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 ANKRD36BQ8N2N9 1353 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 IL16Q14005 1332 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 TIAM1Q13009 1591 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 BICDL2A1A5D9 508 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 NEK11Q8NG66 645 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 ZMYND15Q9H091 742 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 RNF113AO15541 343 aaKnown RBP12.72□□□□□ -0.37
RPAP1-204ENST00000562303 SDSP20132 328 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 ANO6Q4KMQ2 910 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 STMN4Q9H169 189 aaPredicted RBP12.72□□□□□ -0.37
RPAP1-204ENST00000562303 PICK1Q9NRD5 415 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 ATP6V0A2Q9Y487 856 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 RRP9O43818 475 aaKnown RBP12.72□□□□□ -0.37
RPAP1-204ENST00000562303 HARSP12081 509 aaKnown RBP12.72□□□□□ -0.37
RPAP1-204ENST00000562303 NMIQ13287 307 aaPredicted RBP12.72□□□□□ -0.37
RPAP1-204ENST00000562303 RAB3GAP1Q15042 981 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 TMOD4Q9NZQ9 345 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 CNPY2Q9Y2B0 182 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 HCLS1P14317 486 aaPredicted RBP12.72□□□□□ -0.37
RPAP1-204ENST00000562303 CCDC14Q49A88 953 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 TRERF1Q96PN7 1200 aa12.72□□□□□ -0.37
RPAP1-204ENST00000562303 MAK16Q9BXY0 300 aaKnown RBP12.72□□□□□ -0.37
RPAP1-204ENST00000562303 SCAF11Q99590 1463 aaKnown RBP12.72□□□□□ -0.37
RPAP1-204ENST00000562303 ZBTB16Q05516 673 aa12.71□□□□□ -0.37
RPAP1-204ENST00000562303 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.37
RPAP1-204ENST00000562303 SMC6Q96SB8 1091 aa12.71□□□□□ -0.37
RPAP1-204ENST00000562303 PA2G4Q9UQ80 394 aaKnown RBP12.71□□□□□ -0.37
RPAP1-204ENST00000562303 DHX29Q7Z478 1369 aaKnown RBP12.71□□□□□ -0.37
RPAP1-204ENST00000562303 WDR7Q9Y4E6 1490 aa12.71□□□□□ -0.37
RPAP1-204ENST00000562303 TTC6Q86TZ1 520 aa12.71□□□□□ -0.37
RPAP1-204ENST00000562303 AOPEPQ8N6M6 819 aa12.71□□□□□ -0.37
RPAP1-204ENST00000562303 GNPATO15228 680 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms