RNA–Protein interactions for RNA: ENST00000561077.1

CCNB2-204, Transcript of cyclin B2, human

TSL 5

Gene CCNB2, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNB2-204	ENST00000561077	SLC4A5	Q9BY07	1137 aa		13.26	□□□□□ -0.29
CCNB2-204	ENST00000561077	ZNF408	Q9H9D4	720 aa		13.26	□□□□□ -0.29
CCNB2-204	ENST00000561077	SAGE1	Q9NXZ1	904 aa		13.26	□□□□□ -0.29
CCNB2-204	ENST00000561077	VPS9D1	Q9Y2B5	631 aa		13.26	□□□□□ -0.29
CCNB2-204	ENST00000561077	ABCC4	O15439	1325 aa		13.25	□□□□□ -0.29
CCNB2-204	ENST00000561077	PPP1R3G	B7ZBB8	358 aa		13.25	□□□□□ -0.29
CCNB2-204	ENST00000561077	TCERG1	O14776	1098 aa	Known RBP	13.25	□□□□□ -0.29
CCNB2-204	ENST00000561077	KIAA2012	Q0VF49	1180 aa		13.25	□□□□□ -0.29
CCNB2-204	ENST00000561077	TAF7	Q15545	349 aa	Predicted RBP	13.25	□□□□□ -0.29
CCNB2-204	ENST00000561077	KIF6	Q6ZMV9	814 aa		13.25	□□□□□ -0.29
CCNB2-204	ENST00000561077	TRPM4	Q8TD43	1214 aa		13.25	□□□□□ -0.29
CCNB2-204	ENST00000561077	ZBED2	Q9BTP6	218 aa		13.25	□□□□□ -0.29
CCNB2-204	ENST00000561077	FAM155A	B1AL88	458 aa	Predicted RBP	13.24	□□□□□ -0.29
CCNB2-204	ENST00000561077	NBR1	Q14596	966 aa		13.24	□□□□□ -0.29
CCNB2-204	ENST00000561077	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.24	□□□□□ -0.29
CCNB2-204	ENST00000561077	NGEF	Q8N5V2	710 aa		13.24	□□□□□ -0.29
CCNB2-204	ENST00000561077	CFAP53	Q96M91	514 aa		13.24	□□□□□ -0.29
CCNB2-204	ENST00000561077	ZBTB3	Q9H5J0	574 aa		13.24	□□□□□ -0.29
CCNB2-204	ENST00000561077	TAF1	P21675	1872 aa		13.24	□□□□□ -0.29
CCNB2-204	ENST00000561077	HUNK	P57058	714 aa		13.23	□□□□□ -0.29
CCNB2-204	ENST00000561077	PPP1R42	Q7Z4L9	355 aa		13.23	□□□□□ -0.29
CCNB2-204	ENST00000561077	NLRP3	Q96P20	1036 aa		13.23	□□□□□ -0.29
CCNB2-204	ENST00000561077	BCL2L13	Q9BXK5	485 aa		13.23	□□□□□ -0.29
CCNB2-204	ENST00000561077	ERBB4	Q15303	1308 aa		13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	POLR2A	P24928	1970 aa	Known RBP	13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	SHTN1	A0MZ66	631 aa		13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	COL9A1	P20849	921 aa		13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	SOX10	P56693	466 aa		13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	TNIP1	Q15025	636 aa		13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	PARP10	Q53GL7	1025 aa		13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	SLC10A5	Q5PT55	438 aa		13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	PRPF38B	Q5VTL8	546 aa	Known RBP	13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	RGMB	Q6NW40	437 aa		13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	DPP8	Q6V1X1	898 aa	Predicted RBP	13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	SP8	Q8IXZ3	490 aa		13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	TMX4	Q9H1E5	349 aa	Predicted RBP	13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	MIS18A	Q9NYP9	233 aa		13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	CNOT7	Q9UIV1	285 aa	Known RBP	13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	NUDC	Q9Y266	331 aa		13.22	□□□□□ -0.29
CCNB2-204	ENST00000561077	YDJC	A8MPS7	323 aa		13.21	□□□□□ -0.29
CCNB2-204	ENST00000561077	RAD17	O75943	681 aa		13.21	□□□□□ -0.29
CCNB2-204	ENST00000561077	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.21	□□□□□ -0.29
CCNB2-204	ENST00000561077	MYL6B	P14649	208 aa		13.21	□□□□□ -0.29
CCNB2-204	ENST00000561077	EIF4A1	P60842	406 aa	Known RBP	13.21	□□□□□ -0.29
CCNB2-204	ENST00000561077	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
CCNB2-204	ENST00000561077	C6orf132	Q5T0Z8	1188 aa		13.21	□□□□□ -0.29
CCNB2-204	ENST00000561077	PNISR	Q8TF01	805 aa	Known RBP	13.21	□□□□□ -0.29
CCNB2-204	ENST00000561077	RRP7A	Q9Y3A4	280 aa	Known RBP	13.21	□□□□□ -0.29
CCNB2-204	ENST00000561077	BBOX1	O75936	387 aa		13.2	□□□□□ -0.3
CCNB2-204	ENST00000561077	LRP10	Q7Z4F1	713 aa		13.2	□□□□□ -0.3
CCNB2-204	ENST00000561077	USP48	Q86UV5	1035 aa		13.2	□□□□□ -0.3
CCNB2-204	ENST00000561077	MPND	Q8N594	471 aa		13.2	□□□□□ -0.3
CCNB2-204	ENST00000561077	PDE4DIP	Q5VU43	2346 aa		13.2	□□□□□ -0.3
CCNB2-204	ENST00000561077	PSME4	Q14997	1843 aa		13.19	□□□□□ -0.3
CCNB2-204	ENST00000561077	GRXCR2	A6NFK2	248 aa		13.19	□□□□□ -0.3
CCNB2-204	ENST00000561077		H7C1D1	291 aa		13.19	□□□□□ -0.3
CCNB2-204	ENST00000561077	CNGB1	Q14028	1251 aa	Predicted RBP	13.19	□□□□□ -0.3
CCNB2-204	ENST00000561077	DLK2	Q6UY11	383 aa		13.19	□□□□□ -0.3
CCNB2-204	ENST00000561077	DPF2	Q92785	391 aa		13.19	□□□□□ -0.3
CCNB2-204	ENST00000561077	CCDC102A	Q96A19	550 aa		13.19	□□□□□ -0.3
CCNB2-204	ENST00000561077	UTP14A	Q9BVJ6	771 aa	Known RBP	13.19	□□□□□ -0.3
CCNB2-204	ENST00000561077	GBA2	Q9HCG7	927 aa	Predicted RBP	13.19	□□□□□ -0.3
CCNB2-204	ENST00000561077	RNF186	Q9NXI6	227 aa		13.19	□□□□□ -0.3
CCNB2-204	ENST00000561077	COL4A1	P02462	1669 aa		13.18	□□□□□ -0.3
CCNB2-204	ENST00000561077	SLC10A3	P09131	477 aa		13.18	□□□□□ -0.3
CCNB2-204	ENST00000561077	KIF23	Q02241	960 aa	Predicted RBP	13.18	□□□□□ -0.3
CCNB2-204	ENST00000561077	PAPPA2	Q9BXP8	1791 aa		13.17	□□□□□ -0.3
CCNB2-204	ENST00000561077	TRPA1	O75762	1119 aa		13.17	□□□□□ -0.3
CCNB2-204	ENST00000561077	EGFR	P00533	1210 aa		13.17	□□□□□ -0.3
CCNB2-204	ENST00000561077	GRAP	Q13588	217 aa		13.17	□□□□□ -0.3
CCNB2-204	ENST00000561077	SAMD7	Q7Z3H4	446 aa		13.17	□□□□□ -0.3
CCNB2-204	ENST00000561077	KRT26	Q7Z3Y9	468 aa		13.17	□□□□□ -0.3
CCNB2-204	ENST00000561077	CTU1	Q7Z7A3	348 aa	Known RBP	13.17	□□□□□ -0.3
CCNB2-204	ENST00000561077	C2orf69	Q8N8R5	385 aa		13.17	□□□□□ -0.3
CCNB2-204	ENST00000561077	GRAPL	Q8TC17	118 aa	Predicted RBP	13.17	□□□□□ -0.3
CCNB2-204	ENST00000561077	SCN9A	Q15858	1988 aa		13.17	□□□□□ -0.3
CCNB2-204	ENST00000561077	ADM5	C9JUS6	153 aa		13.16	□□□□□ -0.3
CCNB2-204	ENST00000561077	PSMD14	O00487	310 aa		13.16	□□□□□ -0.3
CCNB2-204	ENST00000561077	MAP3K7	O43318	606 aa		13.16	□□□□□ -0.3
CCNB2-204	ENST00000561077	PPP2R1A	P30153	589 aa		13.16	□□□□□ -0.3
CCNB2-204	ENST00000561077	ZNF157	P51786	506 aa	Predicted RBP	13.16	□□□□□ -0.3
CCNB2-204	ENST00000561077	TMC4	Q7Z404	712 aa		13.16	□□□□□ -0.3
CCNB2-204	ENST00000561077	ZNF609	O15014	1411 aa		13.15	□□□□□ -0.3
CCNB2-204	ENST00000561077	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.15	□□□□□ -0.3
CCNB2-204	ENST00000561077	RPS12	P25398	132 aa	Known RBP	13.15	□□□□□ -0.3
CCNB2-204	ENST00000561077	TSR1	Q2NL82	804 aa	Known RBP	13.15	□□□□□ -0.3
CCNB2-204	ENST00000561077	PROX2	Q3B8N5	592 aa		13.15	□□□□□ -0.3
CCNB2-204	ENST00000561077	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.15	□□□□□ -0.3
CCNB2-204	ENST00000561077	DDX46	Q7L014	1031 aa	Known RBP	13.15	□□□□□ -0.3
CCNB2-204	ENST00000561077	CSRNP1	Q96S65	589 aa		13.15	□□□□□ -0.3
CCNB2-204	ENST00000561077	RTL9	Q8NET4	1388 aa		13.15	□□□□□ -0.3
CCNB2-204	ENST00000561077	HCLS1	P14317	486 aa	Predicted RBP	13.14	□□□□□ -0.31
CCNB2-204	ENST00000561077	NLRP10	Q86W26	655 aa		13.14	□□□□□ -0.31
CCNB2-204	ENST00000561077	DCPS	Q96C86	337 aa	Known RBP	13.14	□□□□□ -0.31
CCNB2-204	ENST00000561077	THUMPD2	Q9BTF0	503 aa	Known RBP	13.14	□□□□□ -0.31
CCNB2-204	ENST00000561077	HPS5	Q9UPZ3	1129 aa		13.14	□□□□□ -0.31
CCNB2-204	ENST00000561077	OSBP	P22059	807 aa		13.13	□□□□□ -0.31
CCNB2-204	ENST00000561077	WASHC4	Q2M389	1173 aa		13.13	□□□□□ -0.31
CCNB2-204	ENST00000561077	PROSER3	Q2NL68	480 aa		13.13	□□□□□ -0.31
CCNB2-204	ENST00000561077	HSP90AB3P	Q58FF7	597 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 12 ms