RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 VGLL2Q8N8G2 317 aa12.83□□□□□ -0.36
CRTC3-209ENST00000560320 USP26Q9BXU7 913 aa12.83□□□□□ -0.36
CRTC3-209ENST00000560320 ANKRD2Q9GZV1 360 aa12.83□□□□□ -0.36
CRTC3-209ENST00000560320 PAG1Q9NWQ8 432 aa12.83□□□□□ -0.36
CRTC3-209ENST00000560320 MYH13Q9UKX3 1938 aa12.83□□□□□ -0.36
CRTC3-209ENST00000560320 AKAP11Q9UKA4 1901 aa12.82□□□□□ -0.36
CRTC3-209ENST00000560320 SGSM2O43147 1006 aa12.82□□□□□ -0.36
CRTC3-209ENST00000560320 ADORA1P30542 326 aa12.82□□□□□ -0.36
CRTC3-209ENST00000560320 KCNJ4P48050 445 aa12.82□□□□□ -0.36
CRTC3-209ENST00000560320 CCDC24Q8N4L8 307 aa12.82□□□□□ -0.36
CRTC3-209ENST00000560320 HELBQ8NG08 1087 aaPredicted RBP12.82□□□□□ -0.36
CRTC3-209ENST00000560320 RBM17Q96I25 401 aaKnown RBP12.82□□□□□ -0.36
CRTC3-209ENST00000560320 PARP3Q9Y6F1 533 aa12.82□□□□□ -0.36
CRTC3-209ENST00000560320 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
CRTC3-209ENST00000560320 GOLIM4O00461 696 aa12.81□□□□□ -0.36
CRTC3-209ENST00000560320 GRIN3BO60391 1043 aa12.81□□□□□ -0.36
CRTC3-209ENST00000560320 YBX3P16989 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
CRTC3-209ENST00000560320 FGFR2P21802 821 aa12.81□□□□□ -0.36
CRTC3-209ENST00000560320 FKBP4Q02790 459 aaKnown RBP eCLIP12.81□□□□□ -0.36
CRTC3-209ENST00000560320 UBE4AQ14139 1066 aa12.81□□□□□ -0.36
CRTC3-209ENST00000560320 TTF1Q15361 905 aaPredicted RBP12.81□□□□□ -0.36
CRTC3-209ENST00000560320 C3orf67Q6ZVT6 689 aa12.81□□□□□ -0.36
CRTC3-209ENST00000560320 KBTBD3Q8NAB2 608 aa12.81□□□□□ -0.36
CRTC3-209ENST00000560320 ZNF526Q8TF50 670 aaPredicted RBP12.81□□□□□ -0.36
CRTC3-209ENST00000560320 ZNF512BQ96KM6 892 aaPredicted RBP12.81□□□□□ -0.36
CRTC3-209ENST00000560320 GNL3LQ9NVN8 582 aaKnown RBP12.81□□□□□ -0.36
CRTC3-209ENST00000560320 NRXN2Q9P2S2 1712 aa12.81□□□□□ -0.36
CRTC3-209ENST00000560320 TAF5LO75529 589 aa12.8□□□□□ -0.36
CRTC3-209ENST00000560320 NMIQ13287 307 aaPredicted RBP12.8□□□□□ -0.36
CRTC3-209ENST00000560320 GRAPQ13588 217 aa12.8□□□□□ -0.36
CRTC3-209ENST00000560320 RABEP1Q15276 862 aa12.8□□□□□ -0.36
CRTC3-209ENST00000560320 ZSCAN25Q6NSZ9 544 aa12.8□□□□□ -0.36
CRTC3-209ENST00000560320 HSCBQ8IWL3 235 aa12.8□□□□□ -0.36
CRTC3-209ENST00000560320 JMYQ8N9B5 988 aa12.8□□□□□ -0.36
CRTC3-209ENST00000560320 GRAPLQ8TC17 118 aaPredicted RBP12.8□□□□□ -0.36
CRTC3-209ENST00000560320 CELF1Q92879 486 aaKnown RBP12.8□□□□□ -0.36
CRTC3-209ENST00000560320 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.8□□□□□ -0.36
CRTC3-209ENST00000560320 MINPP1Q9UNW1 487 aa12.8□□□□□ -0.36
CRTC3-209ENST00000560320 PNPLA7Q6ZV29 1317 aa12.8□□□□□ -0.36
CRTC3-209ENST00000560320 KIF3CO14782 793 aa12.79□□□□□ -0.36
CRTC3-209ENST00000560320 ZFYP08048 801 aaPredicted RBP12.79□□□□□ -0.36
CRTC3-209ENST00000560320 ARID4AP29374 1257 aaPredicted RBP12.79□□□□□ -0.36
CRTC3-209ENST00000560320 DDR1Q08345 913 aa12.79□□□□□ -0.36
CRTC3-209ENST00000560320 CAVIN4Q5BKX8 364 aa12.79□□□□□ -0.36
CRTC3-209ENST00000560320 CCDC102BQ68D86 513 aa12.79□□□□□ -0.36
CRTC3-209ENST00000560320 VPS37DQ86XT2 251 aa12.79□□□□□ -0.36
CRTC3-209ENST00000560320 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
CRTC3-209ENST00000560320 ANKRD31Q8N7Z5 1873 aa12.78□□□□□ -0.36
CRTC3-209ENST00000560320 ANAPC15P60006 121 aa12.78□□□□□ -0.36
CRTC3-209ENST00000560320 TMC4Q7Z404 712 aa12.78□□□□□ -0.36
CRTC3-209ENST00000560320 IL27Q8NEV9 243 aa12.78□□□□□ -0.36
CRTC3-209ENST00000560320 NLGN2Q8NFZ4 835 aa12.78□□□□□ -0.36
CRTC3-209ENST00000560320 EDC3Q96F86 508 aaKnown RBP12.78□□□□□ -0.36
CRTC3-209ENST00000560320 BRIP1Q9BX63 1249 aa12.78□□□□□ -0.36
CRTC3-209ENST00000560320 HELLSQ9NRZ9 838 aa12.78□□□□□ -0.36
CRTC3-209ENST00000560320 WWC3Q9ULE0 1092 aa12.78□□□□□ -0.36
CRTC3-209ENST00000560320 MYO5AQ9Y4I1 1855 aaKnown RBP12.77□□□□□ -0.37
CRTC3-209ENST00000560320 RNF113AO15541 343 aaKnown RBP12.77□□□□□ -0.37
CRTC3-209ENST00000560320 BBOX1O75936 387 aa12.77□□□□□ -0.37
CRTC3-209ENST00000560320 MMP10P09238 476 aa12.77□□□□□ -0.37
CRTC3-209ENST00000560320 PDE6BP35913 854 aa12.77□□□□□ -0.37
CRTC3-209ENST00000560320 ZAP70P43403 619 aa12.77□□□□□ -0.37
CRTC3-209ENST00000560320 PHKA1P46020 1223 aa12.77□□□□□ -0.37
CRTC3-209ENST00000560320 MCMDC2Q4G0Z9 681 aa12.77□□□□□ -0.37
CRTC3-209ENST00000560320 FAM227BQ96M60 508 aa12.77□□□□□ -0.37
CRTC3-209ENST00000560320 TMX4Q9H1E5 349 aaPredicted RBP12.77□□□□□ -0.37
CRTC3-209ENST00000560320 SNRKQ9NRH2 765 aa12.77□□□□□ -0.37
CRTC3-209ENST00000560320 NDUFB9Q9Y6M9 179 aa12.77□□□□□ -0.37
CRTC3-209ENST00000560320 DOCK2Q92608 1830 aa12.76□□□□□ -0.37
CRTC3-209ENST00000560320 ST18O60284 1047 aa12.76□□□□□ -0.37
CRTC3-209ENST00000560320 CRY2Q49AN0 593 aa12.76□□□□□ -0.37
CRTC3-209ENST00000560320 KLRG1Q96E93 195 aa12.76□□□□□ -0.37
CRTC3-209ENST00000560320 CRAMP1Q96RY5 1269 aa12.76□□□□□ -0.37
CRTC3-209ENST00000560320 LSG1Q9H089 658 aaKnown RBP12.76□□□□□ -0.37
CRTC3-209ENST00000560320 ANKIB1Q9P2G1 1089 aa12.76□□□□□ -0.37
CRTC3-209ENST00000560320 CCDC171Q6TFL3 1326 aa12.76□□□□□ -0.37
CRTC3-209ENST00000560320 CACNA1SQ13698 1873 aa12.76□□□□□ -0.37
CRTC3-209ENST00000560320 A0A0D9SFI3 127 aa12.75□□□□□ -0.37
CRTC3-209ENST00000560320 FRAT2O75474 233 aaPredicted RBP12.75□□□□□ -0.37
CRTC3-209ENST00000560320 COL4A1P02462 1669 aa12.75□□□□□ -0.37
CRTC3-209ENST00000560320 HOXA10P31260 410 aaPredicted RBP12.75□□□□□ -0.37
CRTC3-209ENST00000560320 MCAMP43121 646 aa12.75□□□□□ -0.37
CRTC3-209ENST00000560320 XDHP47989 1333 aa12.75□□□□□ -0.37
CRTC3-209ENST00000560320 WASHC4Q2M389 1173 aa12.75□□□□□ -0.37
CRTC3-209ENST00000560320 CCDC88AQ3V6T2 1871 aa12.75□□□□□ -0.37
CRTC3-209ENST00000560320 RNF20Q5VTR2 975 aa12.75□□□□□ -0.37
CRTC3-209ENST00000560320 MSL1Q68DK7 614 aa12.75□□□□□ -0.37
CRTC3-209ENST00000560320 SPATA5Q8NB90 893 aa12.75□□□□□ -0.37
CRTC3-209ENST00000560320 SNX21Q969T3 373 aa12.75□□□□□ -0.37
CRTC3-209ENST00000560320 LEMD3Q9Y2U8 911 aa12.75□□□□□ -0.37
CRTC3-209ENST00000560320 MED23Q9ULK4 1368 aa12.74□□□□□ -0.37
CRTC3-209ENST00000560320 ZNF804BA4D1E1 1349 aa12.74□□□□□ -0.37
CRTC3-209ENST00000560320 SEMA3EO15041 775 aa12.74□□□□□ -0.37
CRTC3-209ENST00000560320 NPR1P16066 1061 aa12.74□□□□□ -0.37
CRTC3-209ENST00000560320 ZKSCAN1P17029 563 aaPredicted RBP12.74□□□□□ -0.37
CRTC3-209ENST00000560320 ALDH1B1P30837 517 aa12.74□□□□□ -0.37
CRTC3-209ENST00000560320 HSPA4P34932 840 aa12.74□□□□□ -0.37
CRTC3-209ENST00000560320 MAP3K12Q12852 859 aa12.74□□□□□ -0.37
CRTC3-209ENST00000560320 SCARF1Q14162 830 aa12.74□□□□□ -0.37
CRTC3-209ENST00000560320 ZMYM1Q5SVZ6 1142 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms