RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 BTG4Q9NY30 223 aa8.16□□□□□ -1.1
CLPX-206ENST00000560166 MAP10Q9P2G4 905 aa8.16□□□□□ -1.1
CLPX-206ENST00000560166 NWD2Q9ULI1 1742 aa8.15□□□□□ -1.1
CLPX-206ENST00000560166 CPDO75976 1380 aa8.15□□□□□ -1.1
CLPX-206ENST00000560166 PLEKHG2Q9H7P9 1386 aa8.15□□□□□ -1.1
CLPX-206ENST00000560166 FAM83GA6ND36 823 aa8.15□□□□□ -1.1
CLPX-206ENST00000560166 GCP02774 474 aa8.15□□□□□ -1.1
CLPX-206ENST00000560166 FSHRP23945 695 aa8.15□□□□□ -1.1
CLPX-206ENST00000560166 VAC14Q08AM6 782 aa8.15□□□□□ -1.1
CLPX-206ENST00000560166 KRTAP1-3Q8IUG1 177 aa8.15□□□□□ -1.1
CLPX-206ENST00000560166 CCDC116Q8IYX3 515 aa8.15□□□□□ -1.1
CLPX-206ENST00000560166 RUNDC1Q96C34 613 aa8.15□□□□□ -1.1
CLPX-206ENST00000560166 KDRP35968 1356 aa8.14□□□□□ -1.11
CLPX-206ENST00000560166 GPR37L1O60883 481 aa8.14□□□□□ -1.11
CLPX-206ENST00000560166 U2AF1L5P0DN76 240 aaPredicted RBP8.14□□□□□ -1.11
CLPX-206ENST00000560166 U2AF1Q01081 240 aaKnown RBP eCLIP8.14□□□□□ -1.11
CLPX-206ENST00000560166 RRS1Q15050 365 aaKnown RBP8.14□□□□□ -1.11
CLPX-206ENST00000560166 CCDC27Q2M243 656 aa8.14□□□□□ -1.11
CLPX-206ENST00000560166 WASHC4Q2M389 1173 aa8.14□□□□□ -1.11
CLPX-206ENST00000560166 FAM196AQ6ZSG2 479 aa8.14□□□□□ -1.11
CLPX-206ENST00000560166 SH3RF1Q7Z6J0 888 aa8.14□□□□□ -1.11
CLPX-206ENST00000560166 ARHGEF25Q86VW2 580 aa8.14□□□□□ -1.11
CLPX-206ENST00000560166 AEBP1Q8IUX7 1158 aa8.14□□□□□ -1.11
CLPX-206ENST00000560166 TRMT44Q8IYL2 757 aaKnown RBP8.14□□□□□ -1.11
CLPX-206ENST00000560166 GALNT6Q8NCL4 622 aa8.14□□□□□ -1.11
CLPX-206ENST00000560166 ADAMTS19Q8TE59 1207 aa8.14□□□□□ -1.11
CLPX-206ENST00000560166 EPS8L1Q8TE68 723 aa8.14□□□□□ -1.11
CLPX-206ENST00000560166 IP6K1Q92551 441 aa8.14□□□□□ -1.11
CLPX-206ENST00000560166 ZNF521Q96K83 1311 aa8.13□□□□□ -1.11
CLPX-206ENST00000560166 HOXC9P31274 260 aa8.13□□□□□ -1.11
CLPX-206ENST00000560166 AMPHP49418 695 aa8.13□□□□□ -1.11
CLPX-206ENST00000560166 GAS6Q14393 721 aa8.13□□□□□ -1.11
CLPX-206ENST00000560166 VASH1Q7L8A9 365 aaPredicted RBP8.13□□□□□ -1.11
CLPX-206ENST00000560166 PLEKHF1Q96S99 279 aa8.13□□□□□ -1.11
CLPX-206ENST00000560166 NCAPD2Q15021 1401 aa8.12□□□□□ -1.11
CLPX-206ENST00000560166 IGSF1Q8N6C5 1336 aa8.12□□□□□ -1.11
CLPX-206ENST00000560166 PPM1GO15355 546 aaPredicted RBP8.12□□□□□ -1.11
CLPX-206ENST00000560166 NEFMP07197 916 aa8.12□□□□□ -1.11
CLPX-206ENST00000560166 RFX1P22670 979 aa8.12□□□□□ -1.11
CLPX-206ENST00000560166 CBLBQ13191 982 aa8.12□□□□□ -1.11
CLPX-206ENST00000560166 EIF4A2Q14240 407 aaKnown RBP8.12□□□□□ -1.11
CLPX-206ENST00000560166 NUP188Q5SRE5 1749 aa8.12□□□□□ -1.11
CLPX-206ENST00000560166 PEAK1Q9H792 1746 aa8.12□□□□□ -1.11
CLPX-206ENST00000560166 SPATA31A5Q5VU36 1347 aa8.11□□□□□ -1.11
CLPX-206ENST00000560166 SPATA31A7Q8IWB4 1347 aa8.11□□□□□ -1.11
CLPX-206ENST00000560166 MAPK8IP3Q9UPT6 1336 aa8.11□□□□□ -1.11
CLPX-206ENST00000560166 U2SURPO15042 1029 aaKnown RBP8.11□□□□□ -1.11
CLPX-206ENST00000560166 ZBTB7AO95365 584 aa8.11□□□□□ -1.11
CLPX-206ENST00000560166 HSP90AB2PQ58FF8 381 aa8.11□□□□□ -1.11
CLPX-206ENST00000560166 STRN4Q9NRL3 753 aa8.11□□□□□ -1.11
CLPX-206ENST00000560166 NRAPQ86VF7 1730 aa8.1□□□□□ -1.11
CLPX-206ENST00000560166 APAF1O14727 1248 aa8.1□□□□□ -1.11
CLPX-206ENST00000560166 FBLN1P23142 703 aa8.1□□□□□ -1.11
CLPX-206ENST00000560166 NR6A1Q15406 480 aa8.1□□□□□ -1.11
CLPX-206ENST00000560166 NUTM2GQ5VZR2 741 aa8.1□□□□□ -1.11
CLPX-206ENST00000560166 TCP11L2Q8N4U5 519 aa8.1□□□□□ -1.11
CLPX-206ENST00000560166 USP35Q9P2H5 1018 aa8.1□□□□□ -1.11
CLPX-206ENST00000560166 RREB1Q92766 1687 aa8.1□□□□□ -1.11
CLPX-206ENST00000560166 CRYBG1Q9Y4K1 1723 aa8.09□□□□□ -1.11
CLPX-206ENST00000560166 IL16Q14005 1332 aa8.09□□□□□ -1.11
CLPX-206ENST00000560166 CTSOP43234 321 aaPredicted RBP8.09□□□□□ -1.11
CLPX-206ENST00000560166 LMOD3Q0VAK6 560 aa8.09□□□□□ -1.11
CLPX-206ENST00000560166 PPP1R26Q5T8A7 1209 aaPredicted RBP8.09□□□□□ -1.11
CLPX-206ENST00000560166 WDR63Q8IWG1 891 aa8.09□□□□□ -1.11
CLPX-206ENST00000560166 FHDC1Q9C0D6 1143 aaPredicted RBP8.09□□□□□ -1.11
CLPX-206ENST00000560166 PGPEP1Q9NXJ5 209 aa8.09□□□□□ -1.11
CLPX-206ENST00000560166 ABCA3Q99758 1704 aa8.09□□□□□ -1.11
CLPX-206ENST00000560166 THSD7AQ9UPZ6 1657 aa8.08□□□□□ -1.12
CLPX-206ENST00000560166 MAP2P11137 1827 aaKnown RBP8.08□□□□□ -1.12
CLPX-206ENST00000560166 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.08□□□□□ -1.12
CLPX-206ENST00000560166 PRKAR2BP31323 418 aa8.08□□□□□ -1.12
CLPX-206ENST00000560166 TMPOP42166 694 aaKnown RBP8.08□□□□□ -1.12
CLPX-206ENST00000560166 CALD1Q05682 793 aaKnown RBP8.08□□□□□ -1.12
CLPX-206ENST00000560166 NFE2L2Q16236 605 aa8.08□□□□□ -1.12
CLPX-206ENST00000560166 PODNQ7Z5L7 613 aa8.08□□□□□ -1.12
CLPX-206ENST00000560166 CCDC146Q8IYE0 955 aa8.08□□□□□ -1.12
CLPX-206ENST00000560166 PBXIP1Q96AQ6 731 aa8.08□□□□□ -1.12
CLPX-206ENST00000560166 PRDM11Q9NQV5 511 aa8.08□□□□□ -1.12
CLPX-206ENST00000560166 E9PSI1 815 aa8.07□□□□□ -1.12
CLPX-206ENST00000560166 HTATSF1O43719 755 aaKnown RBP8.07□□□□□ -1.12
CLPX-206ENST00000560166 GPR162Q16538 588 aa8.07□□□□□ -1.12
CLPX-206ENST00000560166 SULT6B1Q6IMI4 303 aa8.07□□□□□ -1.12
CLPX-206ENST00000560166 SH3BP5LQ7L8J4 393 aa8.07□□□□□ -1.12
CLPX-206ENST00000560166 TRMT2AQ8IZ69 625 aaKnown RBP8.07□□□□□ -1.12
CLPX-206ENST00000560166 ARMC2Q8NEN0 867 aa8.07□□□□□ -1.12
CLPX-206ENST00000560166 SYT17Q9BSW7 474 aa8.07□□□□□ -1.12
CLPX-206ENST00000560166 PPP1R12CQ9BZL4 782 aa8.07□□□□□ -1.12
CLPX-206ENST00000560166 ALG2Q9H553 416 aa8.07□□□□□ -1.12
CLPX-206ENST00000560166 KIAA0232Q92628 1395 aa8.07□□□□□ -1.12
CLPX-206ENST00000560166 COL14A1Q05707 1796 aaKnown RBP8.07□□□□□ -1.12
CLPX-206ENST00000560166 LMO7Q8WWI1 1683 aa8.06□□□□□ -1.12
CLPX-206ENST00000560166 BCRP11274 1271 aa8.06□□□□□ -1.12
CLPX-206ENST00000560166 NPM2Q86SE8 214 aaKnown RBP8.06□□□□□ -1.12
CLPX-206ENST00000560166 GAS2L2Q8NHY3 880 aa8.06□□□□□ -1.12
CLPX-206ENST00000560166 RNF217Q8TC41 542 aa8.06□□□□□ -1.12
CLPX-206ENST00000560166 PDGFDQ9GZP0 370 aaPredicted RBP8.06□□□□□ -1.12
CLPX-206ENST00000560166 SPATA31A1Q5TZJ5 1347 aa8.05□□□□□ -1.12
CLPX-206ENST00000560166 CHD4Q14839 1912 aa8.05□□□□□ -1.12
CLPX-206ENST00000560166 FAM208AQ9UK61 1670 aaKnown RBP8.05□□□□□ -1.12
CLPX-206ENST00000560166 LTN1O94822 1766 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms