RNA–Protein interactions for RNA: ENST00000558088.1

VPS13C-205, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-205ENST00000558088 INTS5Q6P9B9 1019 aaKnown RBP5.86□□□□□ -1.47
VPS13C-205ENST00000558088 CAPN12Q6ZSI9 719 aa5.86□□□□□ -1.47
VPS13C-205ENST00000558088 WNT8BQ93098 351 aa5.86□□□□□ -1.47
VPS13C-205ENST00000558088 H3BRJ5 948 aa5.85□□□□□ -1.47
VPS13C-205ENST00000558088 TGFB1P01137 390 aa5.85□□□□□ -1.47
VPS13C-205ENST00000558088 EPHA1P21709 976 aa5.85□□□□□ -1.47
VPS13C-205ENST00000558088 CES1P23141 567 aa5.85□□□□□ -1.47
VPS13C-205ENST00000558088 ATP2B4P23634 1241 aa5.85□□□□□ -1.47
VPS13C-205ENST00000558088 ARL4DP49703 201 aa5.85□□□□□ -1.47
VPS13C-205ENST00000558088 NFIAQ12857 509 aa5.85□□□□□ -1.47
VPS13C-205ENST00000558088 ANKRD34AQ69YU3 496 aa5.85□□□□□ -1.47
VPS13C-205ENST00000558088 PBXIP1Q96AQ6 731 aa5.85□□□□□ -1.47
VPS13C-205ENST00000558088 NUDT16Q96DE0 195 aaKnown RBP5.85□□□□□ -1.47
VPS13C-205ENST00000558088 CCDC97Q96F63 343 aaPredicted RBP5.85□□□□□ -1.47
VPS13C-205ENST00000558088 MYRFLQ96LU7 910 aa5.85□□□□□ -1.47
VPS13C-205ENST00000558088 C7orf69Q9H7B7 122 aa5.85□□□□□ -1.47
VPS13C-205ENST00000558088 SH2B1Q9NRF2 756 aaPredicted RBP5.85□□□□□ -1.47
VPS13C-205ENST00000558088 ZBTB39O15060 712 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 CYP2E1P05181 493 aaPredicted RBP5.84□□□□□ -1.47
VPS13C-205ENST00000558088 RNF43Q68DV7 783 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 FDX2Q6P4F2 183 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 KIAA1211Q6ZU35 1233 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 TRIM42Q8IWZ5 723 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 ARMC10Q8N2F6 343 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 CEP120Q8N960 986 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 FAM46AQ96IP4 442 aaKnown RBP5.84□□□□□ -1.47
VPS13C-205ENST00000558088 DBNDD2Q9BQY9 259 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 ADAM19Q9H013 955 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 RNF208Q9H0X6 261 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 KCNF1Q9H3M0 494 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 OSGEPQ9NPF4 335 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 KCNK4Q9NYG8 393 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 KANSL3Q9P2N6 904 aa5.84□□□□□ -1.47
VPS13C-205ENST00000558088 KIAA1324LA8MWY0 1029 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-205ENST00000558088 GAS2O43903 313 aaKnown RBP5.83□□□□□ -1.48
VPS13C-205ENST00000558088 CLEC10AQ8IUN9 316 aa5.83□□□□□ -1.48
VPS13C-205ENST00000558088 UBASH3BQ8TF42 649 aa5.83□□□□□ -1.48
VPS13C-205ENST00000558088 PMEPA1Q969W9 287 aa5.83□□□□□ -1.48
VPS13C-205ENST00000558088 KLHDC7BQ96G42 594 aa5.83□□□□□ -1.48
VPS13C-205ENST00000558088 POP1Q99575 1024 aaKnown RBP5.83□□□□□ -1.48
VPS13C-205ENST00000558088 TMEM63CQ9P1W3 806 aa5.83□□□□□ -1.48
VPS13C-205ENST00000558088 COL17A1Q9UMD9 1497 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-205ENST00000558088 HMX2A2RU54 273 aa5.82□□□□□ -1.48
VPS13C-205ENST00000558088 PDE2AO00408 941 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-205ENST00000558088 DDX3YO15523 660 aaKnown RBP5.82□□□□□ -1.48
VPS13C-205ENST00000558088 BMP3P12645 472 aa5.82□□□□□ -1.48
VPS13C-205ENST00000558088 TXKP42681 527 aa5.82□□□□□ -1.48
VPS13C-205ENST00000558088 DNM1Q05193 864 aaKnown RBP5.82□□□□□ -1.48
VPS13C-205ENST00000558088 C8orf34Q49A92 452 aa5.82□□□□□ -1.48
VPS13C-205ENST00000558088 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-205ENST00000558088 BEND4Q6ZU67 534 aa5.82□□□□□ -1.48
VPS13C-205ENST00000558088 ZDHHC13Q8IUH4 622 aa5.82□□□□□ -1.48
VPS13C-205ENST00000558088 FAM20CQ8IXL6 584 aa5.82□□□□□ -1.48
VPS13C-205ENST00000558088 GIMAP7Q8NHV1 300 aa5.82□□□□□ -1.48
VPS13C-205ENST00000558088 FOXD4L4Q8WXT5 416 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-205ENST00000558088 SLC7A3Q8WY07 619 aa5.82□□□□□ -1.48
VPS13C-205ENST00000558088 EDEM1Q92611 657 aa5.82□□□□□ -1.48
VPS13C-205ENST00000558088 RUSC1Q9BVN2 902 aa5.82□□□□□ -1.48
VPS13C-205ENST00000558088 GOLGA2P5Q9HBQ8 144 aa5.82□□□□□ -1.48
VPS13C-205ENST00000558088 HIF3AQ9Y2N7 669 aa5.82□□□□□ -1.48
VPS13C-205ENST00000558088 GP2P55259 537 aaKnown RBP5.81□□□□□ -1.48
VPS13C-205ENST00000558088 NLRP12P59046 1061 aa5.81□□□□□ -1.48
VPS13C-205ENST00000558088 SRPK2P78362 688 aaKnown RBP5.81□□□□□ -1.48
VPS13C-205ENST00000558088 C19orf57Q0VDD7 668 aa5.81□□□□□ -1.48
VPS13C-205ENST00000558088 NOM1Q5C9Z4 860 aaKnown RBP5.81□□□□□ -1.48
VPS13C-205ENST00000558088 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
VPS13C-205ENST00000558088 ATCAYQ86WG3 371 aa5.81□□□□□ -1.48
VPS13C-205ENST00000558088 HELQQ8TDG4 1101 aa5.81□□□□□ -1.48
VPS13C-205ENST00000558088 FAM83CQ9BQN1 747 aa5.81□□□□□ -1.48
VPS13C-205ENST00000558088 SEPT3Q9UH03 358 aa5.81□□□□□ -1.48
VPS13C-205ENST00000558088 SERPINA10Q9UK55 444 aa5.81□□□□□ -1.48
VPS13C-205ENST00000558088 ADAM11O75078 769 aa5.8□□□□□ -1.48
VPS13C-205ENST00000558088 AAMPQ13685 434 aa5.8□□□□□ -1.48
VPS13C-205ENST00000558088 ALKBH2Q6NS38 261 aa5.8□□□□□ -1.48
VPS13C-205ENST00000558088 XKR5Q6UX68 686 aa5.8□□□□□ -1.48
VPS13C-205ENST00000558088 C1orf127Q8N9H9 656 aa5.8□□□□□ -1.48
VPS13C-205ENST00000558088 KRTAP4-12Q9BQ66 201 aa5.8□□□□□ -1.48
VPS13C-205ENST00000558088 DZANK1Q9NVP4 752 aa5.8□□□□□ -1.48
VPS13C-205ENST00000558088 CNTN3Q9P232 1028 aa5.8□□□□□ -1.48
VPS13C-205ENST00000558088 SALL4Q9UJQ4 1053 aa5.8□□□□□ -1.48
VPS13C-205ENST00000558088 BTBD11A6QL63 1104 aa5.79□□□□□ -1.48
VPS13C-205ENST00000558088 EIF4EBP3O60516 100 aaPredicted RBP5.79□□□□□ -1.48
VPS13C-205ENST00000558088 MED26O95402 600 aa5.79□□□□□ -1.48
VPS13C-205ENST00000558088 EDN3P14138 238 aa5.79□□□□□ -1.48
VPS13C-205ENST00000558088 MZF1P28698 734 aaPredicted RBP5.79□□□□□ -1.48
VPS13C-205ENST00000558088 PREPP48147 710 aa5.79□□□□□ -1.48
VPS13C-205ENST00000558088 NUTM2GQ5VZR2 741 aa5.79□□□□□ -1.48
VPS13C-205ENST00000558088 SHKBP1Q8TBC3 707 aa5.79□□□□□ -1.48
VPS13C-205ENST00000558088 ZMYND15Q9H091 742 aa5.79□□□□□ -1.48
VPS13C-205ENST00000558088 ATG3Q9NT62 314 aa5.79□□□□□ -1.48
VPS13C-205ENST00000558088 OAS3Q9Y6K5 1087 aaKnown RBP5.79□□□□□ -1.48
VPS13C-205ENST00000558088 TM4SF5O14894 197 aa5.78□□□□□ -1.48
VPS13C-205ENST00000558088 WNT11O96014 354 aa5.78□□□□□ -1.48
VPS13C-205ENST00000558088 PDGFAP04085 211 aa5.78□□□□□ -1.48
VPS13C-205ENST00000558088 RXRBP28702 533 aa5.78□□□□□ -1.48
VPS13C-205ENST00000558088 IKBKEQ14164 716 aa5.78□□□□□ -1.48
VPS13C-205ENST00000558088 ADAMTSL4Q6UY14 1074 aa5.78□□□□□ -1.48
VPS13C-205ENST00000558088 BSNDQ8WZ55 320 aa5.78□□□□□ -1.48
VPS13C-205ENST00000558088 MTMR7Q9Y216 660 aa5.78□□□□□ -1.48
VPS13C-205ENST00000558088 WDR64B1ANS9 1081 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms