RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 ZC3H12CQ9C0D7 883 aaKnown RBP12.92□□□□□ -0.34
IGKV2D-28-202ENST00000558026 RPTORQ8N122 1335 aa12.91□□□□□ -0.34
IGKV2D-28-202ENST00000558026 PRUNE2Q8WUY3 3088 aa12.91□□□□□ -0.34
IGKV2D-28-202ENST00000558026 U2SURPO15042 1029 aaKnown RBP12.91□□□□□ -0.34
IGKV2D-28-202ENST00000558026 FARP2O94887 1054 aaPredicted RBP12.91□□□□□ -0.34
IGKV2D-28-202ENST00000558026 GJA8P48165 433 aa12.91□□□□□ -0.34
IGKV2D-28-202ENST00000558026 DCTN1Q14203 1278 aa12.91□□□□□ -0.34
IGKV2D-28-202ENST00000558026 ARHGEF6Q15052 776 aa12.91□□□□□ -0.34
IGKV2D-28-202ENST00000558026 GDF15Q99988 308 aa12.91□□□□□ -0.34
IGKV2D-28-202ENST00000558026 MXD3Q9BW11 206 aa12.91□□□□□ -0.34
IGKV2D-28-202ENST00000558026 SSC5DA1L4H1 1573 aa12.9□□□□□ -0.34
IGKV2D-28-202ENST00000558026 NECTIN2Q92692 538 aa12.9□□□□□ -0.34
IGKV2D-28-202ENST00000558026 GUCD1Q96NT3 240 aa12.9□□□□□ -0.34
IGKV2D-28-202ENST00000558026 GJB1P08034 283 aa12.89□□□□□ -0.35
IGKV2D-28-202ENST00000558026 CCL5P13501 91 aa12.89□□□□□ -0.35
IGKV2D-28-202ENST00000558026 TAF1CQ15572 869 aaPredicted RBP12.89□□□□□ -0.35
IGKV2D-28-202ENST00000558026 LRIT3Q3SXY7 679 aa12.89□□□□□ -0.35
IGKV2D-28-202ENST00000558026 NKX2-3Q8TAU0 364 aa12.89□□□□□ -0.35
IGKV2D-28-202ENST00000558026 FAM122AQ96E09 287 aa12.89□□□□□ -0.35
IGKV2D-28-202ENST00000558026 THUMPD2Q9BTF0 503 aaKnown RBP12.89□□□□□ -0.35
IGKV2D-28-202ENST00000558026 TESPA1A2RU30 521 aaPredicted RBP12.88□□□□□ -0.35
IGKV2D-28-202ENST00000558026 UFL1O94874 794 aa12.88□□□□□ -0.35
IGKV2D-28-202ENST00000558026 BMP8BP34820 402 aa12.88□□□□□ -0.35
IGKV2D-28-202ENST00000558026 NLRP10Q86W26 655 aa12.88□□□□□ -0.35
IGKV2D-28-202ENST00000558026 FAM161BQ96MY7 647 aa12.88□□□□□ -0.35
IGKV2D-28-202ENST00000558026 TRMT112Q9UI30 125 aaKnown RBP12.88□□□□□ -0.35
IGKV2D-28-202ENST00000558026 USP17L3A6NCW0 530 aa12.87□□□□□ -0.35
IGKV2D-28-202ENST00000558026 USP17L4A6NCW7 530 aa12.87□□□□□ -0.35
IGKV2D-28-202ENST00000558026 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
IGKV2D-28-202ENST00000558026 MAP3K11Q16584 847 aa12.87□□□□□ -0.35
IGKV2D-28-202ENST00000558026 USP17L1Q7RTZ2 530 aa12.87□□□□□ -0.35
IGKV2D-28-202ENST00000558026 RNF208Q9H0X6 261 aa12.87□□□□□ -0.35
IGKV2D-28-202ENST00000558026 ZMYND8Q9ULU4 1186 aaPredicted RBP12.87□□□□□ -0.35
IGKV2D-28-202ENST00000558026 SH3TC1Q8TE82 1336 aa12.87□□□□□ -0.35
IGKV2D-28-202ENST00000558026 IRS2Q9Y4H2 1338 aa12.87□□□□□ -0.35
IGKV2D-28-202ENST00000558026 COL3A1P02461 1466 aaPredicted RBP12.86□□□□□ -0.35
IGKV2D-28-202ENST00000558026 LACTBP83111 547 aaPredicted RBP12.86□□□□□ -0.35
IGKV2D-28-202ENST00000558026 APOBEC3FQ8IUX4 373 aaKnown RBP12.86□□□□□ -0.35
IGKV2D-28-202ENST00000558026 U2AF1L4Q8WU68 220 aaKnown RBP12.86□□□□□ -0.35
IGKV2D-28-202ENST00000558026 BRI3BPQ8WY22 251 aa12.86□□□□□ -0.35
IGKV2D-28-202ENST00000558026 MS4A4AQ96JQ5 239 aa12.86□□□□□ -0.35
IGKV2D-28-202ENST00000558026 ZFYVE28Q9HCC9 887 aa12.86□□□□□ -0.35
IGKV2D-28-202ENST00000558026 OTOFQ9HC10 1997 aa12.85□□□□□ -0.35
IGKV2D-28-202ENST00000558026 CTGFP29279 349 aa12.85□□□□□ -0.35
IGKV2D-28-202ENST00000558026 PRKAR2BP31323 418 aa12.85□□□□□ -0.35
IGKV2D-28-202ENST00000558026 FAM43AQ8N2R8 423 aa12.85□□□□□ -0.35
IGKV2D-28-202ENST00000558026 RTF1Q92541 710 aaKnown RBP12.85□□□□□ -0.35
IGKV2D-28-202ENST00000558026 MUC3AQ02505 3323 aa12.85□□□□□ -0.35
IGKV2D-28-202ENST00000558026 PPP1R12BO60237 982 aaPredicted RBP12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 ANXA1P04083 346 aa12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 GRK4P32298 578 aa12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 LRP10Q7Z4F1 713 aa12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 C7orf61Q8IZ16 206 aa12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 TDHQ8IZJ6 230 aa12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 OGFOD1Q8N543 542 aa12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 CNKSR2Q8WXI2 1034 aa12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 OPTNQ96CV9 577 aa12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 DEFB129Q9H1M3 183 aa12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 ANKIB1Q9P2G1 1089 aa12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 GGA1Q9UJY5 639 aa12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 KNSTRNQ9Y448 316 aa12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 RIPOR2Q9Y4F9 1068 aa12.84□□□□□ -0.35
IGKV2D-28-202ENST00000558026 SYN1P17600 705 aa12.83□□□□□ -0.36
IGKV2D-28-202ENST00000558026 MAGEA10P43363 369 aaPredicted RBP12.83□□□□□ -0.36
IGKV2D-28-202ENST00000558026 KIF22Q14807 665 aa12.83□□□□□ -0.36
IGKV2D-28-202ENST00000558026 TAF7Q15545 349 aaPredicted RBP12.83□□□□□ -0.36
IGKV2D-28-202ENST00000558026 AMER1Q5JTC6 1135 aaPredicted RBP12.83□□□□□ -0.36
IGKV2D-28-202ENST00000558026 FBXW7Q969H0 707 aa12.83□□□□□ -0.36
IGKV2D-28-202ENST00000558026 UNC93B1Q9H1C4 597 aa12.83□□□□□ -0.36
IGKV2D-28-202ENST00000558026 ELP3Q9H9T3 547 aa12.83□□□□□ -0.36
IGKV2D-28-202ENST00000558026 PODXL2Q9NZ53 605 aa12.83□□□□□ -0.36
IGKV2D-28-202ENST00000558026 BIN2Q9UBW5 565 aaPredicted RBP12.83□□□□□ -0.36
IGKV2D-28-202ENST00000558026 TMEM265A0A087WTH1 108 aa12.82□□□□□ -0.36
IGKV2D-28-202ENST00000558026 CCL15-CCL14A0A0B4J2E2 113 aa12.82□□□□□ -0.36
IGKV2D-28-202ENST00000558026 USP2O75604 605 aaPredicted RBP12.82□□□□□ -0.36
IGKV2D-28-202ENST00000558026 RPS8P62241 208 aaKnown RBP12.82□□□□□ -0.36
IGKV2D-28-202ENST00000558026 CCL15Q16663 113 aa12.82□□□□□ -0.36
IGKV2D-28-202ENST00000558026 PROSER3Q2NL68 480 aa12.82□□□□□ -0.36
IGKV2D-28-202ENST00000558026 DACT2Q5SW24 774 aa12.82□□□□□ -0.36
IGKV2D-28-202ENST00000558026 SRRDQ9UH36 339 aa12.82□□□□□ -0.36
IGKV2D-28-202ENST00000558026 LAMA2P24043 3122 aaKnown RBP12.82□□□□□ -0.36
IGKV2D-28-202ENST00000558026 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
IGKV2D-28-202ENST00000558026 SGPL1O95470 568 aa12.81□□□□□ -0.36
IGKV2D-28-202ENST00000558026 PRMT2P55345 433 aa12.81□□□□□ -0.36
IGKV2D-28-202ENST00000558026 EIF4A1P60842 406 aaKnown RBP12.81□□□□□ -0.36
IGKV2D-28-202ENST00000558026 PDIA6Q15084 440 aa12.81□□□□□ -0.36
IGKV2D-28-202ENST00000558026 SF3B3Q15393 1217 aaKnown RBP12.81□□□□□ -0.36
IGKV2D-28-202ENST00000558026 RTL5Q5HYW3 569 aaPredicted RBP12.81□□□□□ -0.36
IGKV2D-28-202ENST00000558026 NBPF12Q5TAG4 269 aaPredicted RBP12.81□□□□□ -0.36
IGKV2D-28-202ENST00000558026 MAFAQ8NHW3 353 aaPredicted RBP12.81□□□□□ -0.36
IGKV2D-28-202ENST00000558026 RAET1EQ8TD07 263 aa12.81□□□□□ -0.36
IGKV2D-28-202ENST00000558026 TRIM47Q96LD4 638 aa12.81□□□□□ -0.36
IGKV2D-28-202ENST00000558026 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
IGKV2D-28-202ENST00000558026 COL1A1P02452 1464 aaPredicted RBP12.8□□□□□ -0.36
IGKV2D-28-202ENST00000558026 TLR2O60603 784 aa12.8□□□□□ -0.36
IGKV2D-28-202ENST00000558026 OSBPP22059 807 aa12.8□□□□□ -0.36
IGKV2D-28-202ENST00000558026 PODNQ7Z5L7 613 aa12.8□□□□□ -0.36
IGKV2D-28-202ENST00000558026 DIS3LQ8TF46 1054 aaKnown RBP12.8□□□□□ -0.36
IGKV2D-28-202ENST00000558026 FAM89AQ96GI7 184 aa12.8□□□□□ -0.36
IGKV2D-28-202ENST00000558026 ZBED3Q96IU2 234 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms