RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 CCDC171Q6TFL3 1326 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 FKBP4Q02790 459 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 KMT5BQ4FZB7 885 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 KLHL10Q6JEL2 608 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 KCNH5Q8NCM2 988 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 LSG1Q9H089 658 aaKnown RBP12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 CLSTN2Q9H4D0 955 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 CTNNA3Q9UI47 895 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 COL5A2P05997 1499 aaPredicted RBP12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 BTBD11A6QL63 1104 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 NEK1Q96PY6 1258 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 UTP14AQ9BVJ6 771 aaKnown RBP12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 ZCCHC17Q9NP64 241 aaKnown RBP12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 SPTLC3Q9NUV7 552 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 HSP90AB3PQ58FF7 597 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 TAF7LQ5H9L4 462 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 LRRC8AQ8IWT6 810 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 EVI5LQ96CN4 794 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 BCL9LQ86UU0 1499 aa12.69□□□□□ -0.38
CCDC85C-207ENST00000557769 SLC27A2O14975 620 aa12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 CSB-PGBD3P0DP91 1061 aa12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 OLFM4Q6UX06 510 aa12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 NFXL1Q6ZNB6 911 aa12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 KRBA2Q6ZNG9 492 aa12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 EYA1Q99502 592 aa12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 SLC3A2P08195 630 aaKnown RBP12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 HSP90B2PQ58FF3 399 aa12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 ILDR1Q86SU0 546 aaPredicted RBP12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 CCDC191Q8NCU4 936 aa12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 GABPB1Q06547 395 aaPredicted RBP12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 LEKR1Q6ZMV7 388 aa12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 SEC62Q99442 399 aaKnown RBP12.68□□□□□ -0.38
CCDC85C-207ENST00000557769 ANKRD65E5RJM6 399 aa12.67□□□□□ -0.38
CCDC85C-207ENST00000557769 ERO1AQ96HE7 468 aa12.67□□□□□ -0.38
CCDC85C-207ENST00000557769 RABEP2Q9H5N1 569 aa12.67□□□□□ -0.38
CCDC85C-207ENST00000557769 PUF60Q9UHX1 559 aaKnown RBP12.67□□□□□ -0.38
CCDC85C-207ENST00000557769 SHANK3Q9BYB0 1731 aa12.67□□□□□ -0.38
CCDC85C-207ENST00000557769 A0A0D9SFI3 127 aa12.67□□□□□ -0.38
CCDC85C-207ENST00000557769 TOP1P11387 765 aaKnown RBP12.67□□□□□ -0.38
CCDC85C-207ENST00000557769 HOXC9P31274 260 aa12.67□□□□□ -0.38
CCDC85C-207ENST00000557769 VIRMAQ69YN4 1812 aaKnown RBP12.67□□□□□ -0.38
CCDC85C-207ENST00000557769 ATP5J2-PTCD1G3V325 749 aa12.67□□□□□ -0.38
CCDC85C-207ENST00000557769 KCNQ3O43525 872 aa12.67□□□□□ -0.38
CCDC85C-207ENST00000557769 PTCD1O75127 700 aaKnown RBP12.67□□□□□ -0.38
CCDC85C-207ENST00000557769 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
CCDC85C-207ENST00000557769 ZC3H6P61129 1189 aaKnown RBP12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 PPARDQ03181 441 aa12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 TERF2Q15554 542 aa12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 SRRTQ9BXP5 876 aaKnown RBP12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 OSBPL3Q9H4L5 887 aa12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 FLT4P35916 1363 aa12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 RPAP1Q9BWH6 1393 aaPredicted RBP12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 GOLIM4O00461 696 aa12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 AK7Q96M32 723 aa12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 XPO4Q9C0E2 1151 aaKnown RBP12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 HIP1O00291 1037 aa12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 RXRAP19793 462 aa12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 EVCP57679 992 aa12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 ERC1Q8IUD2 1116 aa12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 GPATCH11Q8N954 259 aa12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 DDX41Q9UJV9 622 aaKnown RBP12.66□□□□□ -0.38
CCDC85C-207ENST00000557769 DDX58O95786 925 aaKnown RBP12.65□□□□□ -0.38
CCDC85C-207ENST00000557769 UBASH3AP57075 661 aa12.65□□□□□ -0.38
CCDC85C-207ENST00000557769 IP6K1Q92551 441 aa12.65□□□□□ -0.38
CCDC85C-207ENST00000557769 HDAC5Q9UQL6 1122 aa12.65□□□□□ -0.38
CCDC85C-207ENST00000557769 CHGBP05060 677 aa12.65□□□□□ -0.38
CCDC85C-207ENST00000557769 GTF2E1P29083 439 aaPredicted RBP12.65□□□□□ -0.38
CCDC85C-207ENST00000557769 CASQ1P31415 396 aa12.65□□□□□ -0.38
CCDC85C-207ENST00000557769 RASSF8Q8NHQ8 419 aa12.65□□□□□ -0.38
CCDC85C-207ENST00000557769 TLR7Q9NYK1 1049 aaKnown RBP12.65□□□□□ -0.38
CCDC85C-207ENST00000557769 TAF6LQ9Y6J9 622 aa12.65□□□□□ -0.38
CCDC85C-207ENST00000557769 SLFNL1Q499Z3 407 aa12.65□□□□□ -0.39
CCDC85C-207ENST00000557769 RRP12Q5JTH9 1297 aaKnown RBP12.65□□□□□ -0.39
CCDC85C-207ENST00000557769 CCDC12Q8WUD4 166 aaPredicted RBP12.65□□□□□ -0.39
CCDC85C-207ENST00000557769 C8orf76Q96K31 380 aa12.65□□□□□ -0.39
CCDC85C-207ENST00000557769 LZTFL1Q9NQ48 299 aa12.65□□□□□ -0.39
CCDC85C-207ENST00000557769 CWC15Q9P013 229 aaKnown RBP12.65□□□□□ -0.39
CCDC85C-207ENST00000557769 EP400Q96L91 3159 aa12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 PTPDC1A2A3K4 754 aa12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 HNRNPH2P55795 449 aaKnown RBP12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 CHRNA2Q15822 529 aa12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 USP28Q96RU2 1077 aa12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 MYD88Q99836 296 aa12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 NEMFO60524 1076 aa12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 TRIM29Q14134 588 aa12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 LGR6Q9HBX8 967 aa12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 GSDMDP57764 484 aa12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 SPECC1Q5M775 1068 aa12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 AXDND1Q5T1B0 1012 aaPredicted RBP12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 FNBP4Q8N3X1 1017 aaPredicted RBP12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 PGBD1Q96JS3 809 aa12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 RSPH14Q9UHP6 348 aa12.64□□□□□ -0.39
CCDC85C-207ENST00000557769 GLI3P10071 1580 aa12.63□□□□□ -0.39
CCDC85C-207ENST00000557769 RPS6KB1P23443 525 aa12.63□□□□□ -0.39
CCDC85C-207ENST00000557769 IRX5P78411 483 aaPredicted RBP12.63□□□□□ -0.39
CCDC85C-207ENST00000557769 KIF4BQ2VIQ3 1234 aa12.63□□□□□ -0.39
CCDC85C-207ENST00000557769 NCBP3Q53F19 620 aaKnown RBP12.63□□□□□ -0.39
CCDC85C-207ENST00000557769 VPS18Q9P253 973 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms