RNA–Protein interactions for RNA: ENST00000557410.5

SV2B-206, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 1 (best)

Gene SV2B, Length 4,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-206ENST00000557410 DBNLQ9UJU6 430 aaKnown RBP9.19□□□□□ -0.94
SV2B-206ENST00000557410 DDX19AQ9NUU7 478 aaKnown RBP9.19□□□□□ -0.94
SV2B-206ENST00000557410 ANO10Q9NW15 660 aa9.19□□□□□ -0.94
SV2B-206ENST00000557410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.19□□□□□ -0.94
SV2B-206ENST00000557410 CEP126Q9P2H0 1117 aa9.19□□□□□ -0.94
SV2B-206ENST00000557410 TBC1D2BQ9UPU7 963 aa9.19□□□□□ -0.94
SV2B-206ENST00000557410 C5P01031 1676 aa9.19□□□□□ -0.94
SV2B-206ENST00000557410 CAMTA1Q9Y6Y1 1673 aa9.19□□□□□ -0.94
SV2B-206ENST00000557410 BIN1O00499 593 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 CCP110O43303 1012 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 ATP5JP18859 108 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 PTPN12Q05209 780 aaKnown RBP9.18□□□□□ -0.94
SV2B-206ENST00000557410 TTC39AQ5SRH9 613 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 TAF6LQ9Y6J9 622 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 MEGF6O75095 1541 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 TAF5LO75529 589 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 COL9A3Q14050 684 aaPredicted RBP9.18□□□□□ -0.94
SV2B-206ENST00000557410 CDC37L1Q7L3B6 337 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 DACT1Q9NYF0 836 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.18□□□□□ -0.94
SV2B-206ENST00000557410 MED23Q9ULK4 1368 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 KIF1AQ12756 1690 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 SCN11AQ9UI33 1791 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 CYP27B1O15528 508 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 IGSF3O75054 1194 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 FAM173BQ6P4H8 233 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 DBNDD2Q9BQY9 259 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 SNRKQ9NRH2 765 aa9.18□□□□□ -0.94
SV2B-206ENST00000557410 URI1O94763 535 aaPredicted RBP9.17□□□□□ -0.94
SV2B-206ENST00000557410 NAP1L1P55209 391 aaKnown RBP9.17□□□□□ -0.94
SV2B-206ENST00000557410 SART3Q15020 963 aaKnown RBP9.17□□□□□ -0.94
SV2B-206ENST00000557410 FILIP1LQ4L180 1135 aa9.17□□□□□ -0.94
SV2B-206ENST00000557410 LMBR1LQ6UX01 489 aa9.17□□□□□ -0.94
SV2B-206ENST00000557410 CCDC129Q6ZRS4 1044 aa9.17□□□□□ -0.94
SV2B-206ENST00000557410 DDX46Q7L014 1031 aaKnown RBP9.17□□□□□ -0.94
SV2B-206ENST00000557410 ZBTB3Q9H5J0 574 aa9.17□□□□□ -0.94
SV2B-206ENST00000557410 FSIP1Q8NA03 581 aa9.17□□□□□ -0.94
SV2B-206ENST00000557410 CCDC47Q96A33 483 aaKnown RBP9.17□□□□□ -0.94
SV2B-206ENST00000557410 RFX5P48382 616 aaPredicted RBP9.17□□□□□ -0.94
SV2B-206ENST00000557410 TOB2Q14106 344 aaPredicted RBP9.17□□□□□ -0.94
SV2B-206ENST00000557410 ISM2Q6H9L7 571 aa9.17□□□□□ -0.94
SV2B-206ENST00000557410 NEK1Q96PY6 1258 aa9.17□□□□□ -0.94
SV2B-206ENST00000557410 LRRC2Q9BYS8 371 aa9.17□□□□□ -0.94
SV2B-206ENST00000557410 ACBD3Q9H3P7 528 aa9.17□□□□□ -0.94
SV2B-206ENST00000557410 CNNM1Q9NRU3 951 aa9.17□□□□□ -0.94
SV2B-206ENST00000557410 XBP1P17861 261 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 CCDC57Q2TAC2 916 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 PPFIBP1Q86W92 1011 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 PLBD2Q8NHP8 589 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 TRERF1Q96PN7 1200 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 SEC62Q99442 399 aaKnown RBP9.16□□□□□ -0.94
SV2B-206ENST00000557410 TEX13AQ9BXU3 409 aaPredicted RBP9.16□□□□□ -0.94
SV2B-206ENST00000557410 U3KPZ7 1027 aaPredicted RBP9.16□□□□□ -0.94
SV2B-206ENST00000557410 ADAMTS7Q9UKP4 1686 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 MCMDC2Q4G0Z9 681 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 ANO6Q4KMQ2 910 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 KLHL34Q8N239 644 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 C17orf53Q8N3J3 647 aaPredicted RBP9.16□□□□□ -0.94
SV2B-206ENST00000557410 AFDNP55196 1824 aaKnown RBP9.16□□□□□ -0.94
SV2B-206ENST00000557410 TTC6Q86TZ1 520 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 CAGE1Q8TC20 777 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 FAM200AQ8TCP9 573 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 NUP133Q8WUM0 1156 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 CDCA7Q9BWT1 371 aaPredicted RBP9.16□□□□□ -0.94
SV2B-206ENST00000557410 CGNQ9P2M7 1197 aaKnown RBP9.16□□□□□ -0.94
SV2B-206ENST00000557410 CTNNA3Q9UI47 895 aa9.16□□□□□ -0.94
SV2B-206ENST00000557410 CHGBP05060 677 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 RABL6Q3YEC7 729 aaPredicted RBP9.15□□□□□ -0.94
SV2B-206ENST00000557410 Q6ZUG5 572 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 LRP10Q7Z4F1 713 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 BRF1Q92994 677 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 C8orf76Q96K31 380 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 SMTNL1A8MU46 457 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 RAD21O60216 631 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 POLR3DP05423 398 aaPredicted RBP9.15□□□□□ -0.94
SV2B-206ENST00000557410 TMCO3Q6UWJ1 677 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 TRIM22Q8IYM9 498 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 CCDC82Q8N4S0 544 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 HAUS7Q99871 368 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 DNAJC25Q9H1X3 360 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 ALDH8A1Q9H2A2 487 aaPredicted RBP9.15□□□□□ -0.94
SV2B-206ENST00000557410 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.15□□□□□ -0.94
SV2B-206ENST00000557410 V9GYY5 206 aaPredicted RBP9.15□□□□□ -0.94
SV2B-206ENST00000557410 IDH1O75874 414 aaKnown RBP9.15□□□□□ -0.94
SV2B-206ENST00000557410 TSGA10IPQ3SY00 556 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 RAB11FIP4Q86YS3 637 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 RUFY1Q96T51 708 aa9.15□□□□□ -0.94
SV2B-206ENST00000557410 GOLIM4O00461 696 aa9.15□□□□□ -0.95
SV2B-206ENST00000557410 POLR3GO15318 223 aaPredicted RBP9.15□□□□□ -0.95
SV2B-206ENST00000557410 CBFA2T2O43439 604 aa9.15□□□□□ -0.95
SV2B-206ENST00000557410 CCAR1Q8IX12 1150 aaKnown RBP9.15□□□□□ -0.95
SV2B-206ENST00000557410 BRMS1Q9HCU9 246 aa9.15□□□□□ -0.95
SV2B-206ENST00000557410 CWC25Q9NXE8 425 aaPredicted RBP9.15□□□□□ -0.95
SV2B-206ENST00000557410 CWC15Q9P013 229 aaKnown RBP9.15□□□□□ -0.95
SV2B-206ENST00000557410 ALS2Q96Q42 1657 aa9.15□□□□□ -0.95
SV2B-206ENST00000557410 JAK2O60674 1132 aa9.14□□□□□ -0.95
SV2B-206ENST00000557410 PTGS1P23219 599 aa9.14□□□□□ -0.95
SV2B-206ENST00000557410 USPL1Q5W0Q7 1092 aa9.14□□□□□ -0.95
SV2B-206ENST00000557410 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.14□□□□□ -0.95
SV2B-206ENST00000557410 ZNF652Q9Y2D9 606 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms