RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 DPCR1Q3MIW9 517 aa9.02□□□□□ -0.97
CHD8-209ENST00000555935 ZNF589Q86UQ0 364 aaPredicted RBP9.02□□□□□ -0.97
CHD8-209ENST00000555935 FBXO18Q8NFZ0 1043 aa9.02□□□□□ -0.97
CHD8-209ENST00000555935 TMX1Q9H3N1 280 aa9.02□□□□□ -0.97
CHD8-209ENST00000555935 PA2G4Q9UQ80 394 aaKnown RBP9.02□□□□□ -0.97
CHD8-209ENST00000555935 CEMIPQ8WUJ3 1361 aa9.02□□□□□ -0.97
CHD8-209ENST00000555935 PTPDC1A2A3K4 754 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 SOX12O15370 315 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 SASH1O94885 1247 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 EIF2S2P20042 333 aaKnown RBP9.01□□□□□ -0.97
CHD8-209ENST00000555935 REXO1L1PQ8IX06 675 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 CCDC191Q8NCU4 936 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 RABGGTAQ92696 567 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 FTOQ9C0B1 505 aaKnown RBP eCLIP9.01□□□□□ -0.97
CHD8-209ENST00000555935 PCDHA7Q9UN72 937 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 DIP2AQ14689 1571 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 A0A087WWV3 80 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 MYO1CO00159 1063 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 SASH3O75995 380 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 SEC31AO94979 1220 aaKnown RBP9.01□□□□□ -0.97
CHD8-209ENST00000555935 FANCCQ00597 558 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 NCAPHQ15003 741 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 PLCD3Q8N3E9 789 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 KCNG4Q8TDN1 519 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 BOLA2Q9H3K6 86 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 SALL1Q9NSC2 1324 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 ARHGAP6O43182 974 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 YEATS4O95619 227 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 IVLP07476 585 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 SLC3A2P08195 630 aaKnown RBP9.01□□□□□ -0.97
CHD8-209ENST00000555935 CASQ1P31415 396 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 RSRC2Q7L4I2 434 aaKnown RBP9.01□□□□□ -0.97
CHD8-209ENST00000555935 NFATC2IPQ8NCF5 419 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 SYTL4Q96C24 671 aaPredicted RBP9.01□□□□□ -0.97
CHD8-209ENST00000555935 CCDC8Q9H0W5 538 aaPredicted RBP9.01□□□□□ -0.97
CHD8-209ENST00000555935 RSPH14Q9UHP6 348 aa9.01□□□□□ -0.97
CHD8-209ENST00000555935 MYH15Q9Y2K3 1946 aa9□□□□□ -0.97
CHD8-209ENST00000555935 MED1Q15648 1581 aaPredicted RBP9□□□□□ -0.97
CHD8-209ENST00000555935 ROBO2Q9HCK4 1378 aa9□□□□□ -0.97
CHD8-209ENST00000555935 UTYO14607 1347 aa9□□□□□ -0.97
CHD8-209ENST00000555935 MRC1P22897 1456 aa9□□□□□ -0.97
CHD8-209ENST00000555935 MAP3K9P80192 1104 aa9□□□□□ -0.97
CHD8-209ENST00000555935 BRD3Q15059 726 aa9□□□□□ -0.97
CHD8-209ENST00000555935 DHX32Q7L7V1 743 aaKnown RBP9□□□□□ -0.97
CHD8-209ENST00000555935 MSL3Q8N5Y2 521 aaKnown RBP9□□□□□ -0.97
CHD8-209ENST00000555935 GOLGA6L1Q8N7Z2 621 aa9□□□□□ -0.97
CHD8-209ENST00000555935 FUT8Q9BYC5 575 aa9□□□□□ -0.97
CHD8-209ENST00000555935 AGXT2Q9BYV1 514 aa9□□□□□ -0.97
CHD8-209ENST00000555935 YY1AP1Q9H869 796 aa9□□□□□ -0.97
CHD8-209ENST00000555935 DBF4Q9UBU7 674 aaPredicted RBP9□□□□□ -0.97
CHD8-209ENST00000555935 NWD1Q149M9 1564 aa9□□□□□ -0.97
CHD8-209ENST00000555935 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9□□□□□ -0.97
CHD8-209ENST00000555935 CCDC151A5D8V7 595 aa9□□□□□ -0.97
CHD8-209ENST00000555935 CTDNEP1O95476 244 aa9□□□□□ -0.97
CHD8-209ENST00000555935 ACTN2P35609 894 aa9□□□□□ -0.97
CHD8-209ENST00000555935 NDUFA8P51970 172 aa9□□□□□ -0.97
CHD8-209ENST00000555935 IRX3P78415 501 aaPredicted RBP9□□□□□ -0.97
CHD8-209ENST00000555935 PPP2R3AQ06190 1150 aa9□□□□□ -0.97
CHD8-209ENST00000555935 SF3A1Q15459 793 aaKnown RBP9□□□□□ -0.97
CHD8-209ENST00000555935 NOM1Q5C9Z4 860 aaKnown RBP9□□□□□ -0.97
CHD8-209ENST00000555935 SRLQ86TD4 932 aa9□□□□□ -0.97
CHD8-209ENST00000555935 LINC00301Q8NCQ3 95 aa9□□□□□ -0.97
CHD8-209ENST00000555935 GOLGA1Q92805 767 aa9□□□□□ -0.97
CHD8-209ENST00000555935 MRFAP1Q9Y605 127 aa9□□□□□ -0.97
CHD8-209ENST00000555935 SLIT1O75093 1534 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 NEDD4P46934 1319 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 AGLP35573 1532 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 A0A1B0GVL5 298 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 CYP21A2P08686 494 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 KSR2Q6VAB6 950 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 ILDR1Q86SU0 546 aaPredicted RBP8.99□□□□□ -0.97
CHD8-209ENST00000555935 VSTM4Q8IW00 320 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 FBXW7Q969H0 707 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 ATG3Q9NT62 314 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 POLR3EQ9NVU0 708 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 TLR7Q9NYK1 1049 aaKnown RBP8.99□□□□□ -0.97
CHD8-209ENST00000555935 ADAM21Q9UKJ8 722 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 MAP3K2Q9Y2U5 619 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 VWA3AA6NCI4 1184 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 POTEB2H3BUK9 544 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 FANCGO15287 622 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 ATP5JP18859 108 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 UBASH3AP57075 661 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 STK38Q15208 465 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 LEKR1Q6ZMV7 388 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 OSCARQ8IYS5 282 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 ERCC4Q92889 916 aaPredicted RBP8.99□□□□□ -0.97
CHD8-209ENST00000555935 UTP14AQ9BVJ6 771 aaKnown RBP8.99□□□□□ -0.97
CHD8-209ENST00000555935 PARD6BQ9BYG5 372 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 ZCCHC17Q9NP64 241 aaKnown RBP8.99□□□□□ -0.97
CHD8-209ENST00000555935 PPP2R2CQ9Y2T4 447 aa8.99□□□□□ -0.97
CHD8-209ENST00000555935 GRM8O00222 908 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 MAP2K7O14733 419 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 RPS6KA5O75582 802 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 TOP1P11387 765 aaKnown RBP8.98□□□□□ -0.97
CHD8-209ENST00000555935 HOXC9P31274 260 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 TXLNAP40222 546 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 NOP2P46087 812 aaKnown RBP8.98□□□□□ -0.97
CHD8-209ENST00000555935 LMAN1P49257 510 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 TUBB4BP68371 445 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms