RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 DDX3YO15523 660 aaKnown RBP8.33□□□□□ -1.08
SNX6-204ENST00000555541 ETFBKMTQ8IXQ9 262 aa8.33□□□□□ -1.08
SNX6-204ENST00000555541 UBASH3BQ8TF42 649 aa8.33□□□□□ -1.08
SNX6-204ENST00000555541 PRIMPOLQ96LW4 560 aa8.33□□□□□ -1.08
SNX6-204ENST00000555541 CARD10Q9BWT7 1032 aa8.33□□□□□ -1.08
SNX6-204ENST00000555541 SAP130Q9H0E3 1048 aa8.33□□□□□ -1.08
SNX6-204ENST00000555541 ZMIZ1Q9ULJ6 1067 aa8.33□□□□□ -1.08
SNX6-204ENST00000555541 CDC27P30260 824 aa8.32□□□□□ -1.08
SNX6-204ENST00000555541 PREPP48147 710 aa8.32□□□□□ -1.08
SNX6-204ENST00000555541 COL19A1Q14993 1142 aa8.32□□□□□ -1.08
SNX6-204ENST00000555541 MSMPQ1L6U9 139 aa8.32□□□□□ -1.08
SNX6-204ENST00000555541 POU5F2Q8N7G0 328 aa8.32□□□□□ -1.08
SNX6-204ENST00000555541 KLHL23Q8NBE8 558 aa8.32□□□□□ -1.08
SNX6-204ENST00000555541 LACRTQ9GZZ8 138 aa8.32□□□□□ -1.08
SNX6-204ENST00000555541 NOVA2Q9UNW9 492 aaKnown RBP8.32□□□□□ -1.08
SNX6-204ENST00000555541 KIF4AO95239 1232 aa8.31□□□□□ -1.08
SNX6-204ENST00000555541 BMP3P12645 472 aa8.31□□□□□ -1.08
SNX6-204ENST00000555541 EPHA1P21709 976 aa8.31□□□□□ -1.08
SNX6-204ENST00000555541 BEND4Q6ZU67 534 aa8.31□□□□□ -1.08
SNX6-204ENST00000555541 ACIN1Q9UKV3 1341 aaKnown RBP8.3□□□□□ -1.08
SNX6-204ENST00000555541 PRNPP04156 253 aa8.3□□□□□ -1.08
SNX6-204ENST00000555541 ELOAQ14241 798 aaKnown RBP8.3□□□□□ -1.08
SNX6-204ENST00000555541 DUOXA2Q1HG44 320 aa8.3□□□□□ -1.08
SNX6-204ENST00000555541 SWI5Q1ZZU3 235 aa8.3□□□□□ -1.08
SNX6-204ENST00000555541 CAPN12Q6ZSI9 719 aa8.3□□□□□ -1.08
SNX6-204ENST00000555541 VTI1AQ96AJ9 217 aa8.3□□□□□ -1.08
SNX6-204ENST00000555541 KLHDC7BQ96G42 594 aa8.3□□□□□ -1.08
SNX6-204ENST00000555541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.3□□□□□ -1.08
SNX6-204ENST00000555541 TNFRSF10BO14763 440 aa8.29□□□□□ -1.08
SNX6-204ENST00000555541 C8AP07357 584 aa8.29□□□□□ -1.08
SNX6-204ENST00000555541 ITGB5P18084 799 aa8.29□□□□□ -1.08
SNX6-204ENST00000555541 RFX1P22670 979 aa8.29□□□□□ -1.08
SNX6-204ENST00000555541 CEP135Q66GS9 1140 aa8.29□□□□□ -1.08
SNX6-204ENST00000555541 ADAM19Q9H013 955 aa8.29□□□□□ -1.08
SNX6-204ENST00000555541 RASSF4Q9H2L5 321 aa8.29□□□□□ -1.08
SNX6-204ENST00000555541 PIM2Q9P1W9 311 aa8.29□□□□□ -1.08
SNX6-204ENST00000555541 WDR64B1ANS9 1081 aa8.28□□□□□ -1.08
SNX6-204ENST00000555541 ANKRD34AQ69YU3 496 aa8.28□□□□□ -1.08
SNX6-204ENST00000555541 SH2B1Q9NRF2 756 aaPredicted RBP8.28□□□□□ -1.08
SNX6-204ENST00000555541 HIF3AQ9Y2N7 669 aa8.28□□□□□ -1.08
SNX6-204ENST00000555541 PRMT3O60678 531 aa8.27□□□□□ -1.09
SNX6-204ENST00000555541 HYAL2Q12891 473 aa8.27□□□□□ -1.09
SNX6-204ENST00000555541 CEP120Q8N960 986 aa8.27□□□□□ -1.09
SNX6-204ENST00000555541 STK32AQ8WU08 396 aa8.27□□□□□ -1.09
SNX6-204ENST00000555541 CCDC39Q9UFE4 941 aa8.27□□□□□ -1.09
SNX6-204ENST00000555541 SMNDC1O75940 238 aaKnown RBP eCLIP8.26□□□□□ -1.09
SNX6-204ENST00000555541 CDC25BP30305 580 aa8.26□□□□□ -1.09
SNX6-204ENST00000555541 PBX4Q9BYU1 374 aa8.26□□□□□ -1.09
SNX6-204ENST00000555541 SEC31BQ9NQW1 1179 aa8.26□□□□□ -1.09
SNX6-204ENST00000555541 F13BP05160 661 aa8.25□□□□□ -1.09
SNX6-204ENST00000555541 C16orf46Q6P387 395 aa8.25□□□□□ -1.09
SNX6-204ENST00000555541 SHISA5Q8N114 240 aa8.25□□□□□ -1.09
SNX6-204ENST00000555541 MFSD14AQ96MC6 490 aa8.25□□□□□ -1.09
SNX6-204ENST00000555541 POP1Q99575 1024 aaKnown RBP8.25□□□□□ -1.09
SNX6-204ENST00000555541 ZMYND15Q9H091 742 aa8.25□□□□□ -1.09
SNX6-204ENST00000555541 SLAIN2Q9P270 581 aa8.25□□□□□ -1.09
SNX6-204ENST00000555541 FOSL1P15407 271 aa8.24□□□□□ -1.09
SNX6-204ENST00000555541 BRD2P25440 801 aaKnown RBP8.24□□□□□ -1.09
SNX6-204ENST00000555541 WNT8BQ93098 351 aa8.24□□□□□ -1.09
SNX6-204ENST00000555541 KCNF1Q9H3M0 494 aa8.24□□□□□ -1.09
SNX6-204ENST00000555541 CXXC1Q9P0U4 656 aaPredicted RBP8.24□□□□□ -1.09
SNX6-204ENST00000555541 MEGF11A6BM72 1044 aa8.23□□□□□ -1.09
SNX6-204ENST00000555541 UBAP1LF5GYI3 381 aa8.23□□□□□ -1.09
SNX6-204ENST00000555541 CYP2E1P05181 493 aaPredicted RBP8.23□□□□□ -1.09
SNX6-204ENST00000555541 KRTAP4-11Q9BYQ6 195 aa8.23□□□□□ -1.09
SNX6-204ENST00000555541 RNF208Q9H0X6 261 aa8.23□□□□□ -1.09
SNX6-204ENST00000555541 ZBTB39O15060 712 aa8.22□□□□□ -1.09
SNX6-204ENST00000555541 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.21□□□□□ -1.1
SNX6-204ENST00000555541 H3BRJ5 948 aa8.21□□□□□ -1.1
SNX6-204ENST00000555541 NFKBIEO00221 500 aa8.21□□□□□ -1.1
SNX6-204ENST00000555541 ATG7O95352 703 aa8.21□□□□□ -1.1
SNX6-204ENST00000555541 MAP4P27816 1152 aaKnown RBP8.21□□□□□ -1.1
SNX6-204ENST00000555541 PIP4K2BP78356 416 aa8.21□□□□□ -1.1
SNX6-204ENST00000555541 CPSF6Q16630 551 aaKnown RBP eCLIP8.21□□□□□ -1.1
SNX6-204ENST00000555541 SGO2Q562F6 1265 aa8.21□□□□□ -1.1
SNX6-204ENST00000555541 FAM117BQ6P1L5 589 aa8.21□□□□□ -1.1
SNX6-204ENST00000555541 SPACA7Q96KW9 195 aa8.21□□□□□ -1.1
SNX6-204ENST00000555541 OSGEPQ9NPF4 335 aa8.21□□□□□ -1.1
SNX6-204ENST00000555541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.21□□□□□ -1.1
SNX6-204ENST00000555541 SART1O43290 800 aaKnown RBP8.2□□□□□ -1.1
SNX6-204ENST00000555541 PTPRAP18433 802 aa8.2□□□□□ -1.1
SNX6-204ENST00000555541 NAA30Q147X3 362 aaPredicted RBP8.2□□□□□ -1.1
SNX6-204ENST00000555541 TMEM164Q5U3C3 297 aa8.2□□□□□ -1.1
SNX6-204ENST00000555541 ASIC4Q96FT7 647 aa8.2□□□□□ -1.1
SNX6-204ENST00000555541 TIAF1O95411 115 aa8.19□□□□□ -1.1
SNX6-204ENST00000555541 VSIG10LQ86VR7 867 aa8.19□□□□□ -1.1
SNX6-204ENST00000555541 PIK3R5Q8WYR1 880 aa8.19□□□□□ -1.1
SNX6-204ENST00000555541 FBXL18Q96ME1 805 aa8.19□□□□□ -1.1
SNX6-204ENST00000555541 MKNK1Q9BUB5 465 aa8.19□□□□□ -1.1
SNX6-204ENST00000555541 RUSC1Q9BVN2 902 aa8.19□□□□□ -1.1
SNX6-204ENST00000555541 ANGEL1Q9UNK9 670 aaKnown RBP8.19□□□□□ -1.1
SNX6-204ENST00000555541 LEMD3Q9Y2U8 911 aa8.19□□□□□ -1.1
SNX6-204ENST00000555541 JUNBP17275 347 aaPredicted RBP8.18□□□□□ -1.1
SNX6-204ENST00000555541 SCNN1AP37088 669 aa8.18□□□□□ -1.1
SNX6-204ENST00000555541 HGSNATQ68CP4 663 aa8.18□□□□□ -1.1
SNX6-204ENST00000555541 CLP1Q92989 425 aaKnown RBP8.18□□□□□ -1.1
SNX6-204ENST00000555541 TMPRSS13Q9BYE2 586 aa8.18□□□□□ -1.1
SNX6-204ENST00000555541 ABI2Q9NYB9 513 aaPredicted RBP8.18□□□□□ -1.1
SNX6-204ENST00000555541 ZAP70P43403 619 aa8.17□□□□□ -1.1
SNX6-204ENST00000555541 NLRP12P59046 1061 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms